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verifyBamID download

The binary of VerifyBamID is 2012.06.20 version. If you use verifyBamID, please e-mail hmkang@umich.edu.

Binary distribution

The binary version is expected to run in Ubuntu x64 platform. In other platforms, please download the source distribution and build it.

    verifyBamID.20120620.gz

Source distribution

This version is recommended for Unix users with access to the GNU C++ compiler. To install verifyBamID, follow the instruction on our wiki page . Have fun!

    verifyBamID.20120620.tar.gz

Supporting files

This file contains Omni 2.5M SNP array contains allele frequency information across 1,000 Genomes individuals (chr20 only). Additionally, a chromosome 20 BAM file is included for the test purpose. This file can particularly be useful when testing possible sample mixtures without having genotype files. For targeted sequencing, it is important to subselect markers that are included in the targeted region.

    verifyBamID_test.20120518.tar.gz (chrom20 VCF and example BAM files, ~300MB)
    Omni25_genotypes_1525_samples_v2.b37.PASS.ALL.sites.vcf.gz (for whole genome Omni2.5 allele frequency, ~50MB)

Archive of Sources for Older Versions

Old releases of verifyBamID or resources are archived below. It is highly recommended that you download the most recent version, instead of these. For a list of changes check out the ChangeLog file in the most recent distribution.

    verifyBamID.20120524.tar.gz
    verifyBamID.20120523.tar.gz
    verifyBamID.20120518.tar.gz
    hapmap3_r3_b37_fwd.consensus.HQ.CEU.bimp.gz
    statgen.20110417.tar.gz
    verifyBamID-0.0.5.tar.gz
    verifyBamID-0.0.4.tar.gz
    verifyBamID-0.0.3.tar.gz
    verifyBamID-0.0.2.tar.gz
    verifyBamID-0.0.1.tar.gz

 
 

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