Trait	Marker	Allele	pTest	pNull	Freq1	Freq0	Chisq	LOD	PValue
disease1	rs111	T	0.6109	0.6691	0.6159	0.7104	29.9352	6.50034	4.46734e-08
disease2	rs111	T	0.7159	0.6691	0.7104	0.6159	16.8259	3.65369	4.09708e-05
disease1	rs222	T	0.7687	0.7929	0.7712	0.8180	6.99176	1.51824	0.00818858
disease2	rs222	T	0.8208	0.7929	0.8180	0.7712	7.99403	1.73588	0.00469318
disease1	rs333	T	0.6109	0.6691	0.6159	0.7104	29.9352	6.50034	4.46734e-08
disease2	rs333	T	0.7159	0.6691	0.7104	0.6159	16.8259	3.65369	4.09708e-05
disease1	rs444	G	0.4792	0.5251	0.4833	0.5609	16.5467	3.59308	4.74657e-05
disease2	rs444	G	0.5654	0.5251	0.5609	0.4833	11.0507	2.39962	0.000886549
disease1	rs555	T	0.8422	0.8761	0.8447	0.8924	20.8198	4.52095	5.04595e-06
disease2	rs555	T	0.8952	0.8761	0.8924	0.8447	5.66993	1.23121	0.0172582
disease1	rs666	C	0.4614	0.5035	0.4652	0.5364	13.8826	3.01456	0.000194594
disease2	rs666	C	0.5405	0.5035	0.5364	0.4652	9.32068	2.02396	0.00226582
disease1	rs777	T	0.4614	0.5035	0.4652	0.5364	13.8826	3.01456	0.000194594
disease2	rs777	T	0.5405	0.5035	0.5364	0.4652	9.32068	2.02396	0.00226582
disease1	rs888	C	0.7687	0.7929	0.7712	0.8180	6.99176	1.51824	0.00818858
disease2	rs888	C	0.8208	0.7929	0.8180	0.7712	7.99403	1.73588	0.00469318
disease1	rs999	A	0.4599	0.5022	0.4636	0.5348	14.0229	3.04504	0.000180594
disease2	rs999	A	0.5389	0.5022	0.5348	0.4636	9.17644	1.99264	0.00245151