Tabix Member List
This is the complete list of members for
Tabix, including all inherited members.
| getBinsForRegion(uint32_t start, uint32_t end, uint16_t binList[MAX_NUM_BINS]) (defined in IndexBase) | IndexBase | [protected, static] |
| getMinOffsetFromLinearIndex(int32_t refID, uint32_t position, uint64_t &minOffset) const (defined in IndexBase) | IndexBase | |
| getNumRefs() const | IndexBase | |
| getStartPos(const char *refName, int32_t start, uint64_t &fileStartPos) | Tabix | |
| IndexBase() (defined in IndexBase) | IndexBase | |
| LINEAR_INDEX_SHIFT (defined in IndexBase) | IndexBase | [protected, static] |
| MAX_NUM_BINS (defined in IndexBase) | IndexBase | [protected, static] |
| MAX_POSITION (defined in IndexBase) | IndexBase | [protected, static] |
| myRefs (defined in IndexBase) | IndexBase | [protected] |
| n_ref (defined in IndexBase) | IndexBase | [protected] |
| readIndex(const char *filename) | Tabix | [virtual] |
| resetIndex() | Tabix | [virtual] |
| Tabix() (defined in Tabix) | Tabix | |
| ~IndexBase() (defined in IndexBase) | IndexBase | [virtual] |
| ~Tabix() (defined in Tabix) | Tabix | [virtual] |
