FastQFile Member List

This is the complete list of members for FastQFile, including all inherited members.

closeFile()	FastQFile
disableMessages()	FastQFile
disableSeqIDCheck()	FastQFile
enableMessages()	FastQFile
enableSeqIDCheck()	FastQFile
FastQFile(int minReadLength=10, int numPrintableErrors=20)	FastQFile
getSpaceType()	FastQFile	[inline]
isEof()	FastQFile
isOpen()	FastQFile
keepReadingFile()	FastQFile
myPlusLine (defined in FastQFile)	FastQFile
myQualityString (defined in FastQFile)	FastQFile
myRawSequence (defined in FastQFile)	FastQFile
mySequenceIdentifier (defined in FastQFile)	FastQFile
mySequenceIdLine (defined in FastQFile)	FastQFile
openFile(const char *fileName, BaseAsciiMap::SPACE_TYPE spaceType=BaseAsciiMap::UNKNOWN)	FastQFile
readFastQSequence()	FastQFile
setMaxErrors(int maxErrors)	FastQFile
validateFastQFile(const String &filename, bool printBaseComp, BaseAsciiMap::SPACE_TYPE spaceType, bool printQualAvg=false)	FastQFile