ReadBase Class Reference
When we call PileupReader::getPileup, we return a set of these objects representing the bases found in all overlapping reads in the given BAM file. More...
#include <PileupReader.h>
Collaboration diagram for ReadBase:
Public Member Functions | |
| bool | set (SamRecord &, int basePosition) |
| char | getBase () |
| char | getPhredQualityChar () |
| int | getPhredQualityScore () |
| int | getDeletedBaseCount () |
| int | getInsertedBasesOverlapping () |
| bool | hasInsertionFollowing () |
Detailed Description
When we call PileupReader::getPileup, we return a set of these objects representing the bases found in all overlapping reads in the given BAM file.
The information in this class is the pertinent information from the SAM format record.
Definition at line 81 of file PileupReader.h.
The documentation for this class was generated from the following files:
- lib/bam/PileupReader.h
- lib/bam/PileupReader.cpp
