prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-05-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-05-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-05_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	171	0.00018	0.00134621	0.182		0.524	0.512-0.535	OR	1.15	0.802-1.65	1.15	0.802-1.65	1.13	0.871-1.46	1.13	0.871-1.46	1.2	1.02-1.41	1.2	1.02-1.41	1.14	1.01-1.28	1.14	1.01-1.28	1.14	1.05-1.24	1.14	1.05-1.24	1.04	0.933-1.15	0.503	1.09	0.981-1.21	0.109	1.19	1.07-1.32	0.0011	True	False	False	False	Both	10394	4892	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-06-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-06-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-06_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	47	3.4e-08	0.00229561	0.182		0.529	0.518-0.54	OR	1.22	0.864-1.73	1.22	0.864-1.73	1.11	0.862-1.43	1.11	0.862-1.43	1.23	1.05-1.45	1.23	1.05-1.45	1.27	1.12-1.43	1.27	1.12-1.43	1.22	1.12-1.32	1.22	1.12-1.32	1.13	1.02-1.26	0.0233	1.19	1.07-1.33	0.00106	1.35	1.21-1.5	2.75e-08	True	False	False	False	Both	10394	4892	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-07-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-07-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-07_MGI_20200608	P_5e-07	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-07_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-07)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	18	2.5e-05	0.00244158	0.182		0.519	0.507-0.53	OR	1.25	0.87-1.78	1.25	0.87-1.78	1.29	1-1.65	1.29	1-1.65	1.18	1-1.39	1.18	1-1.39	1.14	1.01-1.28	1.14	1.01-1.28	1.17	1.08-1.27	1.17	1.08-1.27	1.03	0.927-1.14	0.584	1.13	1.01-1.25	0.0266	1.23	1.11-1.37	9.28e-05	True	False	False	False	Both	10394	4892	GRCh37/hg19	P<=5e-07					2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-09-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-09-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-09_MGI_20200608	P_5e-09	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-09_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-09)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	10	6.7e-05	0.0028122	0.182		0.513	0.501-0.525	OR	1.19	0.825-1.72	1.19	0.825-1.72	1.33	1.03-1.71	1.33	1.03-1.71	1.27	1.08-1.5	1.27	1.08-1.5	1.27	1.13-1.43	1.27	1.13-1.43	1.15	1.05-1.25	1.15	1.05-1.25	1.07	0.96-1.18	0.232	1.07	0.966-1.19	0.185	1.2	1.08-1.33	0.000601	True	False	False	False	Both	10394	4892	GRCh37/hg19	P<=5e-09					2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-08-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-p-5e-08-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-08_MGI_20200608	P_5e-08	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-08_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	GWAS Hits	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	14	5.1e-05	0.00274434	0.182		0.515	0.503-0.526	OR	1.48	1.04-2.1	1.48	1.04-2.1	1.32	1.03-1.7	1.32	1.03-1.7	1.2	1.01-1.41	1.2	1.01-1.41	1.21	1.07-1.36	1.21	1.07-1.36	1.19	1.09-1.29	1.19	1.09-1.29	1.04	0.94-1.16	0.418	1.1	0.99-1.22	0.0769	1.25	1.12-1.39	4.08e-05	True	False	False	True	Both	10394	4892	GRCh37/hg19	P<=5e-08	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000353/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000353/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-08_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_P_5e-08_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-pt-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-pt-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PT_MGI_20200608	P&T	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PT_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	15	2.7e-05	0.00296649	0.182		0.517	0.506-0.527	OR	1.42	1-2.02	1.42	1-2.02	1.35	1.05-1.73	1.35	1.05-1.73	1.21	1.03-1.43	1.21	1.03-1.43	1.19	1.06-1.35	1.19	1.06-1.35	1.18	1.08-1.28	1.18	1.08-1.28	1.06	0.955-1.18	0.266	1.12	1-1.24	0.0403	1.25	1.12-1.39	3.57e-05	True	False	False	True	Both	10394	4892	GRCh37/hg19	P<=1e-07	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000355/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000355/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PT_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PT_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-prs-cs-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-prs-cs-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PRS-CS_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1118667	6.3e-05	0.00091153	0.182		0.521	0.51-0.532	OR	1.27	0.887-1.81	1.27	0.887-1.81	1.27	0.982-1.64	1.27	0.982-1.64	1.11	0.939-1.31	1.11	0.939-1.31	1.19	1.06-1.35	1.19	1.06-1.35	1.12	1.03-1.22	1.12	1.03-1.22	1.05	0.946-1.17	0.355	1.12	1.01-1.24	0.0391	1.19	1.07-1.32	0.00113	True	False	False	True	Both	10394	4892	GRCh37/hg19	auto	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000354/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000354/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PRS-CS_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_PRS-CS_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode10001-ukbb-saige-hrc-x10001-lassosum-mgi-20200608	prsweb-phecode10001-ukbb-saige-hrc-x10001-lassosum-mgi-20200608	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_LASSOSUM_MGI_20200608	10001	Any Cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	179	1.5e-07	0.00368364	0.182		0.523	0.512-0.535	OR	1.61	1.14-2.27	1.61	1.14-2.27	1.27	0.986-1.63	1.27	0.986-1.63	1.26	1.07-1.48	1.26	1.07-1.48	1.27	1.13-1.43	1.27	1.13-1.43	1.21	1.11-1.32	1.21	1.11-1.32	1.12	1.01-1.25	0.0311	1.11	1-1.24	0.0492	1.31	1.18-1.45	5.89e-07	True	False	False	True	Both	10394	4892	GRCh37/hg19	s=0.2;Lambda=0.008859	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000356/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000356/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_LASSOSUM_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE10001_UKBB-SAIGE-HRC-X10001_LASSOSUM_MGI_20200608/exclusion.tsv	2020-06-08