prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode149-1-ukbb-saige-hrc-x149-1-p-5e-05-mgi-20200608	prsweb-phecode149-1-ukbb-saige-hrc-x149-1-p-5e-05-mgi-20200608	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_P_5e-05_MGI_20200608	149.1	Cancer of oropharynx	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	77	0.69	0.00496104	0.083		0.502	0.452-0.552	OR	1.02	0.181-5.75	1.02	0.181-5.75	0.862	0.231-3.22	0.862	0.231-3.22	0.767	0.317-1.85	0.767	0.317-1.85	0.885	0.484-1.62	0.885	0.484-1.62	1.2	0.814-1.76	1.2	0.814-1.76	1.35	0.831-2.2	0.225	0.926	0.544-1.58	0.776	1.26	0.773-2.06	0.351	False	False	False	False	Both	137	1362	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode149-1-ukbb-saige-hrc-x149-1-pt-mgi-20200608	prsweb-phecode149-1-ukbb-saige-hrc-x149-1-pt-mgi-20200608	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_PT_MGI_20200608	P&T	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_PT_MGI_20200608	149.1	Cancer of oropharynx	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	77	0.69	0.00496104	0.083		0.502	0.452-0.552	OR	1.02	0.181-5.75	1.02	0.181-5.75	0.862	0.231-3.22	0.862	0.231-3.22	0.767	0.317-1.85	0.767	0.317-1.85	0.885	0.484-1.62	0.885	0.484-1.62	1.2	0.814-1.76	1.2	0.814-1.76	1.35	0.831-2.2	0.225	0.926	0.544-1.58	0.776	1.26	0.773-2.06	0.351	False	False	False	False	Both	137	1362	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode149-1-ukbb-saige-hrc-x149-1-prs-cs-mgi-20200608	prsweb-phecode149-1-ukbb-saige-hrc-x149-1-prs-cs-mgi-20200608	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_PRS-CS_MGI_20200608	149.1	Cancer of oropharynx	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.86	0.000410492	0.083		0.508	0.457-0.558	OR	1.71	0.427-6.85	1.71	0.427-6.85	1.57	0.569-4.36	1.57	0.569-4.36	1.22	0.586-2.55	1.22	0.586-2.55	1.38	0.818-2.31	1.38	0.818-2.31	1.07	0.723-1.6	1.07	0.723-1.6	1.13	0.687-1.86	0.631	1.12	0.683-1.85	0.648	1.16	0.706-1.91	0.558	False	False	False	False	Both	137	1362	GRCh37/hg19	auto					2020-06-08
prsweb-phecode149-1-c09-lassosum-mgi-20200608	prsweb-phecode149-1-c09-lassosum-mgi-20200608	PRSWEB_PHECODE149.1_C09_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE149.1_C09_LASSOSUM_MGI_20200608	149.1	Diagnoses - main ICD10: C09 Malignant neoplasm of tonsil	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	41255	0.95	0.00160282	0.083		0.497	0.447-0.546	OR	2.48	0.735-8.36	2.48	0.735-8.36	1.97	0.769-5.06	1.97	0.769-5.06	1.38	0.686-2.79	1.38	0.686-2.79	1.13	0.649-1.97	1.13	0.649-1.97	0.883	0.584-1.33	0.883	0.584-1.33	1.13	0.7-1.81	0.624	0.928	0.563-1.53	0.768	0.904	0.548-1.49	0.693	False	False	False	False	Both	137	1362	GRCh37/hg19	s=1;Lambda=0.1					2020-06-08
prsweb-phecode149-1-ukbb-saige-hrc-x149-1-lassosum-mgi-20200608	prsweb-phecode149-1-ukbb-saige-hrc-x149-1-lassosum-mgi-20200608	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE149.1_UKBB-SAIGE-HRC-X149.1_LASSOSUM_MGI_20200608	149.1	Cancer of oropharynx	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	442201	0.56	0.00256852	0.083		0.515	0.464-0.561	OR	2.41	0.715-8.1	2.41	0.715-8.1	2.31	0.96-5.57	2.31	0.96-5.57	1.37	0.682-2.77	1.37	0.682-2.77	1.21	0.705-2.08	1.21	0.705-2.08	1.03	0.694-1.54	1.03	0.694-1.54	0.984	0.595-1.63	0.949	1.22	0.748-1.98	0.429	1.12	0.683-1.84	0.652	False	False	False	False	Both	137	1362	GRCh37/hg19	s=0.9;Lambda=0.04833					2020-06-08