prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode151-ukbb-saige-hrc-x151-p-5e-05-mgi-20200608	prsweb-phecode151-ukbb-saige-hrc-x151-p-5e-05-mgi-20200608	PRSWEB_PHECODE151_UKBB-SAIGE-HRC-X151_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE151_UKBB-SAIGE-HRC-X151_P_5e-05_MGI_20200608	151	Cancer of stomach	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	76	0.25	4.26842e-06	0.0828		0.519	0.477-0.56	OR	0.655	0.121-3.53	0.655	0.121-3.53	1.97	0.925-4.18	1.97	0.925-4.18	1.28	0.711-2.29	1.28	0.711-2.29	1.22	0.786-1.88	1.22	0.786-1.88	1.28	0.938-1.74	1.28	0.938-1.74	1.02	0.682-1.54	0.907	1	0.666-1.51	0.991	1.24	0.838-1.83	0.285	False	False	False	False	Both	212	2112	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode151-20001-1018-pt-mgi-20200608	prsweb-phecode151-20001-1018-pt-mgi-20200608	PRSWEB_PHECODE151_20001-1018_PT_MGI_20200608	P&T	PRSWEB_PHECODE151_20001-1018_PT_MGI_20200608	151	Cancer code, self-reported: stomach cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	6	0.89	0.00106406	0.0829		0.504	0.459-0.544	OR	0	0-0	0	0-0	0.796	0.264-2.4	0.796	0.264-2.4	0.688	0.324-1.46	0.688	0.324-1.46	1.01	0.632-1.61	1.01	0.632-1.61	1.19	0.869-1.62	1.19	0.869-1.62	0.916	0.611-1.37	0.673	0.981	0.658-1.46	0.926	1.14	0.775-1.68	0.507	False	False	False	False	Both	212	2112	GRCh37/hg19	P<=1e-05					2020-06-08
prsweb-phecode151-20001-1018-prs-cs-mgi-20200608	prsweb-phecode151-20001-1018-prs-cs-mgi-20200608	PRSWEB_PHECODE151_20001-1018_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE151_20001-1018_PRS-CS_MGI_20200608	151	Cancer code, self-reported: stomach cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	889207	0.62	0.00052864	0.0829		0.507	0.463-0.546	OR	1.55	0.489-4.91	1.55	0.489-4.91	1.97	0.929-4.19	1.97	0.929-4.19	1.37	0.776-2.42	1.37	0.776-2.42	1.21	0.785-1.88	1.21	0.785-1.88	0.929	0.668-1.29	0.929	0.668-1.29	0.699	0.461-1.06	0.0913	1.14	0.784-1.65	0.498	0.877	0.592-1.3	0.514	False	False	False	False	Both	212	2112	GRCh37/hg19	auto					2020-06-08
prsweb-phecode151-20001-1018-lassosum-mgi-20200608	prsweb-phecode151-20001-1018-lassosum-mgi-20200608	PRSWEB_PHECODE151_20001-1018_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE151_20001-1018_LASSOSUM_MGI_20200608	151	Cancer code, self-reported: stomach cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	63785	0.36	0.00239619	0.0829		0.518	0.477-0.56	OR	2.47	0.945-6.46	2.47	0.945-6.46	1.5	0.645-3.48	1.5	0.645-3.48	1.38	0.783-2.44	1.38	0.783-2.44	1.22	0.787-1.88	1.22	0.787-1.88	1.21	0.89-1.66	1.21	0.89-1.66	1.29	0.859-1.95	0.218	1.21	0.797-1.84	0.372	1.43	0.954-2.14	0.0836	False	False	False	False	Both	212	2112	GRCh37/hg19	s=1;Lambda=0.1					2020-06-08
prsweb-phecode151-ukbb-saige-hrc-x151-lassosum-mgi-20200608	prsweb-phecode151-ukbb-saige-hrc-x151-lassosum-mgi-20200608	PRSWEB_PHECODE151_UKBB-SAIGE-HRC-X151_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE151_UKBB-SAIGE-HRC-X151_LASSOSUM_MGI_20200608	151	Cancer of stomach	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1242	0.26	0.00252739	0.0828		0.525	0.483-0.561	OR	2.01	0.71-5.68	2.01	0.71-5.68	1.98	0.931-4.2	1.98	0.931-4.2	1.69	0.996-2.86	1.69	0.996-2.86	1.22	0.787-1.88	1.22	0.787-1.88	0.953	0.686-1.32	0.953	0.686-1.32	1.22	0.811-1.83	0.343	1.35	0.902-2.01	0.145	1.13	0.747-1.71	0.566	False	False	False	False	Both	212	2112	GRCh37/hg19	s=1;Lambda=0.07848					2020-06-08