prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode155-ukbb-saige-hrc-x155-p-5e-05-mgi-20200608	prsweb-phecode155-ukbb-saige-hrc-x155-p-5e-05-mgi-20200608	PRSWEB_PHECODE155_UKBB-SAIGE-HRC-X155_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE155_UKBB-SAIGE-HRC-X155_P_5e-05_MGI_20200608	155	Cancer of liver and intrahepatic bile duct	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	78	0.054	0.000762591	0.0825		0.533	0.492-0.573	OR	0.69	0.127-3.74	0.69	0.127-3.74	1.55	0.664-3.6	1.55	0.664-3.6	1.1	0.59-2.07	1.1	0.59-2.07	1.03	0.643-1.64	1.03	0.643-1.64	1.37	1-1.86	1.37	1-1.86	1.09	0.711-1.68	0.69	1.29	0.852-1.95	0.228	1.52	1.01-2.27	0.0426	False	False	False	False	Both	208	2080	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode155-c22-p-5e-06-mgi-20200608	prsweb-phecode155-c22-p-5e-06-mgi-20200608	PRSWEB_PHECODE155_C22_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE155_C22_P_5e-06_MGI_20200608	155	Diagnoses - main ICD10: C22 Malignant neoplasm of liver and intrahepatic bile ducts	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	11	0.9	0.000809312	0.0826		0.493	0.451-0.535	OR	0.696	0.128-3.77	0.696	0.128-3.77	1.04	0.388-2.8	1.04	0.388-2.8	0.9	0.456-1.78	0.9	0.456-1.78	0.769	0.457-1.3	0.769	0.457-1.3	1.14	0.831-1.57	1.14	0.831-1.57	1.09	0.738-1.62	0.658	0.835	0.55-1.27	0.4	1.1	0.743-1.63	0.632	False	False	False	False	Both	208	2080	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode155-c22-pt-mgi-20200608	prsweb-phecode155-c22-pt-mgi-20200608	PRSWEB_PHECODE155_C22_PT_MGI_20200608	P&T	PRSWEB_PHECODE155_C22_PT_MGI_20200608	155	Diagnoses - main ICD10: C22 Malignant neoplasm of liver and intrahepatic bile ducts	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	9	0.55	0.00168422	0.0826		0.498	0.459-0.536	OR	1.62	0.51-5.18	1.62	0.51-5.18	1.05	0.391-2.82	1.05	0.391-2.82	0.897	0.454-1.77	0.897	0.454-1.77	1.26	0.814-1.96	1.26	0.814-1.96	1.01	0.726-1.4	1.01	0.726-1.4	1.31	0.882-1.95	0.18	1.06	0.702-1.61	0.772	1.12	0.743-1.69	0.59	False	False	False	False	Both	208	2080	GRCh37/hg19	P<=3.98e-06					2020-06-08
prsweb-phecode155-ukbb-saige-hrc-x155-prs-cs-mgi-20200608	prsweb-phecode155-ukbb-saige-hrc-x155-prs-cs-mgi-20200608	PRSWEB_PHECODE155_UKBB-SAIGE-HRC-X155_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE155_UKBB-SAIGE-HRC-X155_PRS-CS_MGI_20200608	155	Cancer of liver and intrahepatic bile duct	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.87	0.000196516	0.0826		0.504	0.458-0.548	OR	1.6	0.499-5.1	1.6	0.499-5.1	2	0.938-4.28	2	0.938-4.28	1.4	0.792-2.47	1.4	0.792-2.47	1.25	0.805-1.93	1.25	0.805-1.93	1.3	0.954-1.77	1.3	0.954-1.77	0.577	0.38-0.877	0.01	0.688	0.462-1.02	0.0658	0.979	0.679-1.41	0.911	False	False	False	False	Both	208	2080	GRCh37/hg19	auto					2020-06-08
prsweb-phecode155-ukbb-saige-hrc-x155-lassosum-mgi-20200608	prsweb-phecode155-ukbb-saige-hrc-x155-lassosum-mgi-20200608	PRSWEB_PHECODE155_UKBB-SAIGE-HRC-X155_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE155_UKBB-SAIGE-HRC-X155_LASSOSUM_MGI_20200608	155	Cancer of liver and intrahepatic bile duct	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1007258	0.69	0.000610143	0.0826		0.506	0.467-0.547	OR	2.62	0.997-6.87	2.62	0.997-6.87	1.32	0.533-3.27	1.32	0.533-3.27	1.1	0.59-2.07	1.1	0.59-2.07	1.14	0.724-1.79	1.14	0.724-1.79	1.11	0.802-1.52	1.11	0.802-1.52	0.828	0.547-1.25	0.372	1.06	0.714-1.57	0.779	1.07	0.725-1.58	0.729	False	False	False	False	Both	208	2080	GRCh37/hg19	s=1;Lambda=0.03793					2020-06-08