prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode170-1-20001-1063-p-5e-05-mgi-20200608	prsweb-phecode170-1-20001-1063-p-5e-05-mgi-20200608	PRSWEB_PHECODE170.1_20001-1063_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE170.1_20001-1063_P_5e-05_MGI_20200608	170.1	Cancer code, self-reported: primary bone cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	48	0.38	0.000171578	0.0829		0.512	0.479-0.546	OR	1.59	0.635-3.97	1.59	0.635-3.97	0.956	0.422-2.16	0.956	0.422-2.16	1.04	0.629-1.73	1.04	0.629-1.73	1.3	0.926-1.83	1.3	0.926-1.83	1.17	0.913-1.5	1.17	0.913-1.5	0.88	0.637-1.22	0.441	0.983	0.717-1.35	0.918	1.11	0.818-1.51	0.498	False	False	False	False	Both	335	3337	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode170-1-20001-1063-p-5e-06-mgi-20200608	prsweb-phecode170-1-20001-1063-p-5e-06-mgi-20200608	PRSWEB_PHECODE170.1_20001-1063_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE170.1_20001-1063_P_5e-06_MGI_20200608	170.1	Cancer code, self-reported: primary bone cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	5	0.22	0.000409866	0.0829		0.504	0.471-0.538	OR	1	0.328-3.06	1	0.328-3.06	1.41	0.704-2.81	1.41	0.704-2.81	1.55	1.01-2.39	1.55	1.01-2.39	1.3	0.924-1.83	1.3	0.924-1.83	1.22	0.955-1.57	1.22	0.955-1.57	1.11	0.807-1.54	0.512	1.04	0.748-1.44	0.82	1.25	0.916-1.71	0.159	False	False	False	False	Both	335	3337	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode170-1-20001-1063-pt-mgi-20200608	prsweb-phecode170-1-20001-1063-pt-mgi-20200608	PRSWEB_PHECODE170.1_20001-1063_PT_MGI_20200608	P&T	PRSWEB_PHECODE170.1_20001-1063_PT_MGI_20200608	170.1	Cancer code, self-reported: primary bone cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	7	0.35	0.00223299	0.0829		0.508	0.478-0.54	OR	1.01	0.33-3.08	1.01	0.33-3.08	0.658	0.251-1.73	0.658	0.251-1.73	1.29	0.814-2.06	1.29	0.814-2.06	0.93	0.634-1.36	0.93	0.634-1.36	1.12	0.87-1.44	1.12	0.87-1.44	1.09	0.786-1.51	0.609	1.17	0.85-1.61	0.335	1.22	0.885-1.67	0.229	False	False	False	False	Both	335	3337	GRCh37/hg19	P<=6.31e-06					2020-06-08
prsweb-phecode170-1-20001-1063-prs-cs-mgi-20200608	prsweb-phecode170-1-20001-1063-prs-cs-mgi-20200608	PRSWEB_PHECODE170.1_20001-1063_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE170.1_20001-1063_PRS-CS_MGI_20200608	170.1	Cancer code, self-reported: primary bone cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	839358	0.52	0.00129516	0.0829		0.51	0.478-0.543	OR	1.31	0.482-3.57	1.31	0.482-3.57	1.26	0.61-2.61	1.26	0.61-2.61	1.17	0.719-1.89	1.17	0.719-1.89	1.23	0.871-1.74	1.23	0.871-1.74	1.09	0.845-1.4	1.09	0.845-1.4	1.08	0.788-1.49	0.617	1.07	0.774-1.47	0.689	1.14	0.831-1.56	0.418	False	False	False	False	Both	335	3337	GRCh37/hg19	auto					2020-06-08
prsweb-phecode170-1-ukbb-saige-hrc-x170-1-prs-cs-mgi-20200608	prsweb-phecode170-1-ukbb-saige-hrc-x170-1-prs-cs-mgi-20200608	PRSWEB_PHECODE170.1_UKBB-SAIGE-HRC-X170.1_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE170.1_UKBB-SAIGE-HRC-X170.1_PRS-CS_MGI_20200608	170.1	Bone cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.2	0.000650284	0.0829		0.52	0.488-0.553	OR	1.58	0.633-3.95	1.58	0.633-3.95	1.1	0.509-2.36	1.1	0.509-2.36	1.41	0.904-2.21	1.41	0.904-2.21	1.4	1-1.95	1.4	1-1.95	1.14	0.883-1.46	1.14	0.883-1.46	1.18	0.854-1.62	0.32	1.06	0.765-1.48	0.717	1.23	0.897-1.7	0.195	False	False	False	False	Both	335	3337	GRCh37/hg19	auto					2020-06-08
prsweb-phecode170-1-20001-1063-lassosum-mgi-20200608	prsweb-phecode170-1-20001-1063-lassosum-mgi-20200608	PRSWEB_PHECODE170.1_20001-1063_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE170.1_20001-1063_LASSOSUM_MGI_20200608	170.1	Cancer code, self-reported: primary bone cancer	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	2805117	0.92	0.00294892	0.0829		0.498	0.466-0.53	OR	1.3	0.477-3.52	1.3	0.477-3.52	0.957	0.423-2.16	0.957	0.423-2.16	0.978	0.582-1.64	0.978	0.582-1.64	1.03	0.709-1.48	1.03	0.709-1.48	0.914	0.702-1.19	0.914	0.702-1.19	1.05	0.767-1.43	0.77	1.02	0.741-1.39	0.922	0.931	0.676-1.28	0.663	False	False	False	False	Both	335	3337	GRCh37/hg19	s=1;Lambda=0.001					2020-06-08
prsweb-phecode170-1-ukbb-saige-hrc-x170-1-lassosum-mgi-20200608	prsweb-phecode170-1-ukbb-saige-hrc-x170-1-lassosum-mgi-20200608	PRSWEB_PHECODE170.1_UKBB-SAIGE-HRC-X170.1_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE170.1_UKBB-SAIGE-HRC-X170.1_LASSOSUM_MGI_20200608	170.1	Bone cancer	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	141650	0.66	0.0014025	0.0829		0.515	0.483-0.548	OR	0	0-0	0	0-0	0.655	0.25-1.72	0.655	0.25-1.72	1.04	0.625-1.72	1.04	0.625-1.72	1.3	0.925-1.83	1.3	0.925-1.83	1.24	0.972-1.59	1.24	0.972-1.59	0.96	0.695-1.33	0.804	0.96	0.695-1.33	0.802	1.21	0.89-1.65	0.222	False	False	False	False	Both	335	3337	GRCh37/hg19	s=0.5;Lambda=0.07848					2020-06-08