prs_id slug legacy_id legacy_model prswebprefix trait_code trait_name trait_type description cohort cohort_label method gwas_source reference_label reference_url snp_count p_value pseudo_r2 brier_score mse aauc aauc_ci effect_metric top_effect_1 top_effect_1_ci top_or_1 top_or_1_ci top_effect_2 top_effect_2_ci top_or_2 top_or_2_ci top_effect_5 top_effect_5_ci top_or_5 top_or_5_ci top_effect_10 top_effect_10_ci top_or_10 top_or_10_ci top_effect_25 top_effect_25_ci top_or_25 top_or_25_ci q1_vs_q2_effect q1_vs_q2_effect_ci q1_vs_q2_p_value q1_vs_q3_effect q1_vs_q3_effect_ci q1_vs_q3_p_value q1_vs_q4_effect q1_vs_q4_effect_ci q1_vs_q4_p_value nominally_significant reversed_effect_warning underpowered_warning upload_to_portal sex cases controls genome_build tuning_parameter weights_external_url weights_url phewas_download_url exclusion_download_url last_updated prsweb-phecode170-2-20001-1068-p-5e-05-mgi-20200608 prsweb-phecode170-2-20001-1068-p-5e-05-mgi-20200608 PRSWEB_PHECODE170.2_20001-1068_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE170.2_20001-1068_P_5e-05_MGI_20200608 170.2 Cancer code, self-reported: sarcoma/fibrosarcoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 50 0.7 0.000449367 0.0828 0.496 0.471-0.522 OR 1.91 0.976-3.73 1.91 0.976-3.73 1.69 1.02-2.79 1.69 1.02-2.79 1.1 0.751-1.62 1.1 0.751-1.62 1.21 0.921-1.59 1.21 0.921-1.59 0.891 0.724-1.1 0.891 0.724-1.1 0.909 0.71-1.16 0.451 1.05 0.83-1.34 0.667 0.873 0.68-1.12 0.286 False False False False Both 551 5496 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode170-2-c3-connective-soft-nas-p-5e-05-mgi-20200608 prsweb-phecode170-2-c3-connective-soft-nas-p-5e-05-mgi-20200608 PRSWEB_PHECODE170.2_C3-CONNECTIVE-SOFT-NAS_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE170.2_C3-CONNECTIVE-SOFT-NAS_P_5e-05_MGI_20200608 170.2 Malignant neoplasm of other connective and soft tissue Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 74 0.75 0.000185237 0.0828 0.499 0.473-0.523 OR 1.16 0.511-2.65 1.16 0.511-2.65 0.943 0.497-1.79 0.943 0.497-1.79 1.07 0.721-1.58 1.07 0.721-1.58 1.1 0.834-1.46 1.1 0.834-1.46 1.04 0.854-1.27 1.04 0.854-1.27 1.08 0.843-1.38 0.55 0.953 0.74-1.23 0.705 1.05 0.818-1.34 0.72 False False False False Both 551 5496 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode170-2-c3-mestothel-softtissue-p-5e-05-mgi-20200608 prsweb-phecode170-2-c3-mestothel-softtissue-p-5e-05-mgi-20200608 PRSWEB_PHECODE170.2_C3-MESTOTHEL-SOFTTISSUE_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE170.2_C3-MESTOTHEL-SOFTTISSUE_P_5e-05_MGI_20200608 170.2 Melignant neoplasm of mesothelium and soft tissue Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 83 0.72 0.000461847 0.0828 0.499 0.473-0.524 OR 0.803 0.304-2.12 0.803 0.304-2.12 0.578 0.26-1.28 0.578 0.26-1.28 1.03 0.694-1.53 1.03 0.694-1.53 1.23 0.94-1.62 1.23 0.94-1.62 0.968 0.79-1.19 0.968 0.79-1.19 1.11 0.869-1.43 0.394 1.1 0.858-1.41 0.451 1.04 0.806-1.33 0.778 False False False False Both 551 5496 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-p-5e-05-mgi-20200608 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-p-5e-05-mgi-20200608 PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_P_5e-05_MGI_20200608 170.2 Cancer of connective tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 86 0.067 3.73779e-05 0.0827 0.513 0.487-0.539 OR 1.73 0.858-3.47 1.73 0.858-3.47 1.59 0.951-2.66 1.59 0.951-2.66 1.07 0.726-1.59 1.07 0.726-1.59 1.07 0.803-1.42 1.07 0.803-1.42 1.11 0.907-1.35 1.11 0.907-1.35 1.09 0.843-1.4 0.523 1.12 0.873-1.44 0.37 1.18 0.92-1.51 0.191 False False False False Both 551 5496 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode170-2-c3-connective-soft-nas-p-5e-06-mgi-20200608 prsweb-phecode170-2-c3-connective-soft-nas-p-5e-06-mgi-20200608 PRSWEB_PHECODE170.2_C3-CONNECTIVE-SOFT-NAS_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE170.2_C3-CONNECTIVE-SOFT-NAS_P_5e-06_MGI_20200608 170.2 Malignant neoplasm of other connective and soft tissue Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 11 0.97 0.000840518 0.0828 0.49 0.464-0.516 OR 1.35 0.625-2.93 1.35 0.625-2.93 1.41 0.821-2.42 1.41 0.821-2.42 1.11 0.753-1.62 1.11 0.753-1.62 0.963 0.717-1.29 0.963 0.717-1.29 1.03 0.846-1.26 1.03 0.846-1.26 0.792 0.617-1.02 0.069 0.942 0.74-1.2 0.625 0.94 0.739-1.2 0.616 False False False False Both 551 5496 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-p-5e-06-mgi-20200608 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-p-5e-06-mgi-20200608 PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_P_5e-06_MGI_20200608 170.2 Cancer of connective tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 11 0.56 0.000329924 0.0828 0.474 0.45-0.5 OR 1.16 0.51-2.65 1.16 0.51-2.65 1.6 0.956-2.67 1.6 0.956-2.67 1.27 0.878-1.83 1.27 0.878-1.83 0.986 0.735-1.32 0.986 0.735-1.32 0.967 0.789-1.18 0.967 0.789-1.18 1.04 0.81-1.33 0.76 1.12 0.879-1.44 0.35 1.02 0.789-1.31 0.906 False False False False Both 551 5496 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode170-2-20001-1068-pt-mgi-20200608 prsweb-phecode170-2-20001-1068-pt-mgi-20200608 PRSWEB_PHECODE170.2_20001-1068_PT_MGI_20200608 P&T PRSWEB_PHECODE170.2_20001-1068_PT_MGI_20200608 170.2 Cancer code, self-reported: sarcoma/fibrosarcoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 61 0.87 0.000503207 0.0828 0.495 0.47-0.522 OR 1.72 0.853-3.45 1.72 0.853-3.45 1.04 0.56-1.92 1.04 0.56-1.92 1.11 0.754-1.63 1.11 0.754-1.63 0.982 0.733-1.32 0.982 0.733-1.32 0.946 0.771-1.16 0.946 0.771-1.16 0.868 0.678-1.11 0.26 0.96 0.754-1.22 0.738 0.894 0.7-1.14 0.371 False False False False Both 551 5496 GRCh37/hg19 P<=6.31e-05 2020-06-08 prsweb-phecode170-2-c3-connective-soft-nas-pt-mgi-20200608 prsweb-phecode170-2-c3-connective-soft-nas-pt-mgi-20200608 PRSWEB_PHECODE170.2_C3-CONNECTIVE-SOFT-NAS_PT_MGI_20200608 P&T PRSWEB_PHECODE170.2_C3-CONNECTIVE-SOFT-NAS_PT_MGI_20200608 170.2 Malignant neoplasm of other connective and soft tissue Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 12 0.95 0.00143421 0.0828 0.49 0.464-0.516 OR 2.09 1.1-3.99 2.09 1.1-3.99 1.6 0.957-2.67 1.6 0.957-2.67 1.11 0.755-1.63 1.11 0.755-1.63 1 0.75-1.34 1 0.75-1.34 0.93 0.757-1.14 0.93 0.757-1.14 0.91 0.711-1.16 0.455 0.993 0.78-1.26 0.952 0.9 0.703-1.15 0.405 False False False False Both 551 5496 GRCh37/hg19 P<=6.31e-06 2020-06-08 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-pt-mgi-20200608 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-pt-mgi-20200608 PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_PT_MGI_20200608 P&T PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_PT_MGI_20200608 170.2 Cancer of connective tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative P&T UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 6 0.58 0.000996014 0.0828 0.456 0.435-0.477 OR 1.35 0.623-2.92 1.35 0.623-2.92 1.51 0.889-2.55 1.51 0.889-2.55 1.32 0.937-1.86 1.32 0.937-1.86 0.984 0.734-1.32 0.984 0.734-1.32 1.1 0.904-1.34 1.1 0.904-1.34 1.07 0.73-1.56 0.733 0.892 0.605-1.31 0.561 1.14 0.782-1.67 0.492 False False False False Both 551 5496 GRCh37/hg19 P<=1.26e-06 2020-06-08 prsweb-phecode170-2-20001-1068-prs-cs-mgi-20200608 prsweb-phecode170-2-20001-1068-prs-cs-mgi-20200608 PRSWEB_PHECODE170.2_20001-1068_PRS-CS_MGI_20200608 PRS-CS PRSWEB_PHECODE170.2_20001-1068_PRS-CS_MGI_20200608 170.2 Cancer code, self-reported: sarcoma/fibrosarcoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative PRS-CS UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 971543 0.21 8.01915e-05 0.0828 0.517 0.493-0.542 OR 1.53 0.736-3.19 1.53 0.736-3.19 1.22 0.689-2.17 1.22 0.689-2.17 1.11 0.754-1.63 1.11 0.754-1.63 1.17 0.886-1.54 1.17 0.886-1.54 1.08 0.881-1.31 1.08 0.881-1.31 0.982 0.763-1.27 0.89 1.11 0.865-1.42 0.421 1.12 0.874-1.43 0.373 False False False False Both 551 5496 GRCh37/hg19 auto 2020-06-08 prsweb-phecode170-2-c49-prs-cs-mgi-20200608 prsweb-phecode170-2-c49-prs-cs-mgi-20200608 PRSWEB_PHECODE170.2_C49_PRS-CS_MGI_20200608 PRS-CS PRSWEB_PHECODE170.2_C49_PRS-CS_MGI_20200608 170.2 Diagnoses - main ICD10: C49 Malignant neoplasm of other connective and soft tissue Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative PRS-CS UKB GWAS (ICD10) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 1002162 0.97 4.81457e-05 0.0828 0.504 0.48-0.53 OR 0.448 0.125-1.61 0.448 0.125-1.61 0.673 0.319-1.42 0.673 0.319-1.42 0.922 0.608-1.4 0.922 0.608-1.4 0.944 0.701-1.27 0.944 0.701-1.27 1.08 0.889-1.32 1.08 0.889-1.32 0.845 0.657-1.09 0.19 0.983 0.771-1.25 0.893 1.02 0.802-1.3 0.865 False False False False Both 551 5496 GRCh37/hg19 auto 2020-06-08 prsweb-phecode170-2-20001-1068-lassosum-mgi-20200608 prsweb-phecode170-2-20001-1068-lassosum-mgi-20200608 PRSWEB_PHECODE170.2_20001-1068_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE170.2_20001-1068_LASSOSUM_MGI_20200608 170.2 Cancer code, self-reported: sarcoma/fibrosarcoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative lassosum UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 1494911 0.18 0.000392953 0.0828 0.514 0.489-0.539 OR 1.9 0.97-3.71 1.9 0.97-3.71 1.69 1.02-2.79 1.69 1.02-2.79 1.38 0.971-1.97 1.38 0.971-1.97 1.17 0.887-1.54 1.17 0.887-1.54 1.16 0.952-1.41 1.16 0.952-1.41 1.31 1.03-1.68 0.0307 0.962 0.739-1.25 0.774 1.27 0.988-1.63 0.0619 False False False False Both 551 5496 GRCh37/hg19 s=1;Lambda=0.02976 2020-06-08 prsweb-phecode170-2-c49-lassosum-mgi-20200608 prsweb-phecode170-2-c49-lassosum-mgi-20200608 PRSWEB_PHECODE170.2_C49_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE170.2_C49_LASSOSUM_MGI_20200608 170.2 Diagnoses - main ICD10: C49 Malignant neoplasm of other connective and soft tissue Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative lassosum UKB GWAS (ICD10) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 394653 0.57 0.000648993 0.0828 0.506 0.482-0.532 OR 1.17 0.514-2.66 1.17 0.514-2.66 1.31 0.753-2.29 1.31 0.753-2.29 1.27 0.88-1.83 1.27 0.88-1.83 1.3 0.996-1.7 1.3 0.996-1.7 0.995 0.813-1.22 0.995 0.813-1.22 1.11 0.863-1.42 0.424 1.1 0.86-1.41 0.439 1.06 0.828-1.37 0.627 False False False False Both 551 5496 GRCh37/hg19 s=0.2;Lambda=0.01833 2020-06-08 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-lassosum-mgi-20200608 prsweb-phecode170-2-ukbb-saige-hrc-x170-2-lassosum-mgi-20200608 PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE170.2_UKBB-SAIGE-HRC-X170.2_LASSOSUM_MGI_20200608 170.2 Cancer of connective tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative lassosum UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 534767 0.5 0.00167596 0.0828 0.511 0.486-0.535 OR 0.807 0.306-2.13 0.807 0.306-2.13 0.582 0.262-1.29 0.582 0.262-1.29 0.844 0.548-1.3 0.844 0.548-1.3 0.865 0.636-1.18 0.865 0.636-1.18 1.16 0.958-1.42 1.16 0.958-1.42 0.932 0.725-1.2 0.584 0.974 0.759-1.25 0.833 1.12 0.883-1.43 0.342 False False False False Both 551 5496 GRCh37/hg19 s=1;Lambda=0.04833 2020-06-08