prs_id slug legacy_id legacy_model prswebprefix trait_code trait_name trait_type description cohort cohort_label method gwas_source reference_label reference_url snp_count p_value pseudo_r2 brier_score mse aauc aauc_ci effect_metric top_effect_1 top_effect_1_ci top_or_1 top_or_1_ci top_effect_2 top_effect_2_ci top_or_2 top_or_2_ci top_effect_5 top_effect_5_ci top_or_5 top_or_5_ci top_effect_10 top_effect_10_ci top_or_10 top_or_10_ci top_effect_25 top_effect_25_ci top_or_25 top_or_25_ci q1_vs_q2_effect q1_vs_q2_effect_ci q1_vs_q2_p_value q1_vs_q3_effect q1_vs_q3_effect_ci q1_vs_q3_p_value q1_vs_q4_effect q1_vs_q4_effect_ci q1_vs_q4_p_value nominally_significant reversed_effect_warning underpowered_warning upload_to_portal sex cases controls genome_build tuning_parameter weights_external_url weights_url phewas_download_url exclusion_download_url last_updated prsweb-phecode172-21-20001-1061-p-5e-05-mgi-20200608 prsweb-phecode172-21-20001-1061-p-5e-05-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE172.21_20001-1061_P_5e-05_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 192 4e-24 0.0159093 0.108 0.579 0.563-0.595 OR 1.91 1.25-2.92 1.91 1.25-2.92 1.91 1.4-2.61 1.91 1.4-2.61 1.79 1.45-2.2 1.79 1.45-2.2 1.72 1.47-2.02 1.72 1.47-2.02 1.64 1.46-1.85 1.64 1.46-1.85 1.26 1.06-1.5 0.00933 1.48 1.25-1.75 7.47e-06 2.04 1.73-2.39 5.25e-18 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode172-21-20001-1073-p-5e-05-mgi-20200608 prsweb-phecode172-21-20001-1073-p-5e-05-mgi-20200608 PRSWEB_PHECODE172.21_20001-1073_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE172.21_20001-1073_P_5e-05_MGI_20200608 172.21 Cancer code, self-reported: rodent ulcer Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 96 0.38 0.000306881 0.109 0.5 0.484-0.516 OR 1.03 0.582-1.8 1.03 0.582-1.8 1.05 0.703-1.56 1.05 0.703-1.56 1.01 0.784-1.3 1.01 0.784-1.3 0.987 0.819-1.19 0.987 0.819-1.19 0.956 0.84-1.09 0.956 0.84-1.09 1.23 1.05-1.44 0.00996 1.12 0.955-1.31 0.163 1.06 0.903-1.25 0.472 False False False False Both 1481 9841 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-05-mgi-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-05-mgi-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-05_MGI_20200608 172.21 Basal cell carcinoma Binary known and novel MGI Michigan Genomics Initiative Fixed threshold (5e-05) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.5e-67 0.0409264 0.106 0.632 0.616-0.647 OR 3.61 2.53-5.15 3.61 2.53-5.15 3.67 2.84-4.74 3.67 2.84-4.74 3.09 2.58-3.71 3.09 2.58-3.71 2.7 2.34-3.11 2.7 2.34-3.11 2.35 2.09-2.64 2.35 2.09-2.64 1.5 1.24-1.82 3.71e-05 1.87 1.55-2.25 4.74e-11 3.46 2.91-4.12 1.07e-44 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-05-mgi-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-05-mgi-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-05_MGI_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-05) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 32 1.3e-61 0.0432784 0.106 0.628 0.613-0.644 OR 3.65 2.57-5.18 3.65 2.57-5.18 3.42 2.63-4.44 3.42 2.63-4.44 2.77 2.3-3.33 2.77 2.3-3.33 2.46 2.13-2.85 2.46 2.13-2.85 2.26 2.01-2.53 2.26 2.01-2.53 1.48 1.22-1.79 7.51e-05 1.95 1.62-2.35 1.38e-12 3.34 2.81-3.98 3.85e-42 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode172-21-20001-1061-p-5e-06-mgi-20200608 prsweb-phecode172-21-20001-1061-p-5e-06-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE172.21_20001-1061_P_5e-06_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 55 2.2e-31 0.0241832 0.108 0.587 0.571-0.603 OR 3.05 2.1-4.42 3.05 2.1-4.42 2.74 2.08-3.6 2.74 2.08-3.6 2.15 1.77-2.62 2.15 1.77-2.62 1.98 1.7-2.3 1.98 1.7-2.3 1.81 1.61-2.03 1.81 1.61-2.03 1.36 1.14-1.63 0.000668 1.5 1.26-1.79 4.92e-06 2.31 1.96-2.72 1.1e-23 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode172-21-20001-1073-p-5e-06-mgi-20200608 prsweb-phecode172-21-20001-1073-p-5e-06-mgi-20200608 PRSWEB_PHECODE172.21_20001-1073_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE172.21_20001-1073_P_5e-06_MGI_20200608 172.21 Cancer code, self-reported: rodent ulcer Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 12 0.022 0.00119655 0.109 0.504 0.488-0.52 OR 1.14 0.67-1.95 1.14 0.67-1.95 1.38 0.971-1.96 1.38 0.971-1.96 1.26 0.996-1.59 1.26 0.996-1.59 1.07 0.895-1.28 1.07 0.895-1.28 1.08 0.948-1.22 1.08 0.948-1.22 1.13 0.958-1.33 0.148 1.21 1.04-1.43 0.0167 1.2 1.02-1.4 0.0284 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-06-mgi-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-06-mgi-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-06_MGI_20200608 172.21 Basal cell carcinoma Binary known and novel MGI Michigan Genomics Initiative Fixed threshold (5e-06) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.5e-67 0.0409264 0.106 0.632 0.616-0.647 OR 3.61 2.53-5.15 3.61 2.53-5.15 3.67 2.84-4.74 3.67 2.84-4.74 3.09 2.58-3.71 3.09 2.58-3.71 2.7 2.34-3.11 2.7 2.34-3.11 2.35 2.09-2.64 2.35 2.09-2.64 1.5 1.24-1.82 3.71e-05 1.87 1.55-2.25 4.74e-11 3.46 2.91-4.12 1.07e-44 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-06-mgi-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-06-mgi-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-06_MGI_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-06) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 32 1.3e-61 0.0432784 0.106 0.628 0.613-0.644 OR 3.65 2.57-5.18 3.65 2.57-5.18 3.42 2.63-4.44 3.42 2.63-4.44 2.77 2.3-3.33 2.77 2.3-3.33 2.46 2.13-2.85 2.46 2.13-2.85 2.26 2.01-2.53 2.26 2.01-2.53 1.48 1.22-1.79 7.51e-05 1.95 1.62-2.35 1.38e-12 3.34 2.81-3.98 3.85e-42 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode172-21-20001-1061-p-5e-07-mgi-20200608 prsweb-phecode172-21-20001-1061-p-5e-07-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE172.21_20001-1061_P_5e-07_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-07) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 30 2.4e-31 0.0236495 0.108 0.584 0.569-0.599 OR 2.16 1.42-3.28 2.16 1.42-3.28 2.25 1.68-3.03 2.25 1.68-3.03 2.41 2-2.92 2.41 2-2.92 2.15 1.86-2.5 2.15 1.86-2.5 1.73 1.54-1.95 1.73 1.54-1.95 1.45 1.22-1.74 4.1e-05 1.6 1.34-1.9 1.8e-07 2.33 1.97-2.75 2.25e-23 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-07-mgi-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-07-mgi-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-07_MGI_20200608 172.21 Basal cell carcinoma Binary known and novel MGI Michigan Genomics Initiative Fixed threshold (5e-07) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.5e-67 0.0409264 0.106 0.632 0.616-0.647 OR 3.61 2.53-5.15 3.61 2.53-5.15 3.67 2.84-4.74 3.67 2.84-4.74 3.09 2.58-3.71 3.09 2.58-3.71 2.7 2.34-3.11 2.7 2.34-3.11 2.35 2.09-2.64 2.35 2.09-2.64 1.5 1.24-1.82 3.71e-05 1.87 1.55-2.25 4.74e-11 3.46 2.91-4.12 1.07e-44 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-07-mgi-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-07-mgi-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-07_MGI_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-07) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 31 3.7e-62 0.0425876 0.106 0.629 0.614-0.646 OR 3.84 2.71-5.43 3.84 2.71-5.43 3.55 2.75-4.6 3.55 2.75-4.6 2.77 2.3-3.33 2.77 2.3-3.33 2.52 2.18-2.91 2.52 2.18-2.91 2.17 1.94-2.44 2.17 1.94-2.44 1.47 1.22-1.79 7.61e-05 2.01 1.68-2.42 9.03e-14 3.27 2.75-3.89 1.15e-40 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode172-21-20001-1061-p-5e-09-mgi-20200608 prsweb-phecode172-21-20001-1061-p-5e-09-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_P_5e-09_MGI_20200608 P_5e-09 PRSWEB_PHECODE172.21_20001-1061_P_5e-09_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-09) UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 14 6.4e-27 0.0174412 0.108 0.577 0.562-0.592 OR 2.9 1.99-4.24 2.9 1.99-4.24 2.49 1.87-3.31 2.49 1.87-3.31 2.25 1.85-2.74 2.25 1.85-2.74 1.95 1.67-2.27 1.95 1.67-2.27 1.66 1.48-1.87 1.66 1.48-1.87 1.32 1.11-1.57 0.00178 1.4 1.18-1.66 0.000139 2.06 1.76-2.43 2.24e-18 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-09 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-09-mgi-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-09-mgi-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-09_MGI_20200608 P_5e-09 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-09_MGI_20200608 172.21 Basal cell carcinoma Binary known and novel MGI Michigan Genomics Initiative Fixed threshold (5e-09) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 22 7.7e-67 0.0385653 0.106 0.631 0.615-0.646 OR 4.04 2.88-5.66 4.04 2.88-5.66 3.9 3.03-5.02 3.9 3.03-5.02 3.07 2.56-3.68 3.07 2.56-3.68 2.62 2.27-3.02 2.62 2.27-3.02 2.29 2.04-2.57 2.29 2.04-2.57 1.4 1.15-1.7 0.000667 1.94 1.61-2.33 1.72e-12 3.39 2.85-4.03 3.63e-43 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-09 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-09-mgi-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-09-mgi-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-09_MGI_20200608 P_5e-09 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-09_MGI_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-09) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 24 1.9e-62 0.043963 0.106 0.629 0.613-0.645 OR 4 2.82-5.68 4 2.82-5.68 3.29 2.53-4.29 3.29 2.53-4.29 2.82 2.35-3.38 2.82 2.35-3.38 2.64 2.29-3.05 2.64 2.29-3.05 2.23 1.99-2.5 2.23 1.99-2.5 1.48 1.22-1.79 6.23e-05 1.81 1.51-2.18 2.57e-10 3.23 2.72-3.84 1.69e-40 True False False False Both 1481 9841 GRCh37/hg19 P<=5e-09 2020-06-08 prsweb-phecode172-21-20001-1061-p-5e-08-mgi-20200608 prsweb-phecode172-21-20001-1061-p-5e-08-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_P_5e-08_MGI_20200608 P_5e-08 PRSWEB_PHECODE172.21_20001-1061_P_5e-08_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative GWAS Hits UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 19 3e-25 0.0185456 0.108 0.571 0.555-0.587 OR 2.54 1.72-3.74 2.54 1.72-3.74 2.33 1.74-3.13 2.33 1.74-3.13 2.17 1.79-2.64 2.17 1.79-2.64 1.95 1.67-2.27 1.95 1.67-2.27 1.58 1.4-1.77 1.58 1.4-1.77 1.36 1.14-1.62 0.000656 1.58 1.33-1.87 1.87e-07 2.08 1.76-2.45 3.19e-18 True False False True Both 1481 9841 GRCh37/hg19 P<=5e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000445/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000445/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_P_5e-08_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_P_5e-08_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-08-mgi-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-08-mgi-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_MGI_20200608 P_5e-08 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_MGI_20200608 172.21 Basal cell carcinoma Binary known and novel MGI Michigan Genomics Initiative GWAS Hits Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.5e-67 0.0409264 0.106 0.632 0.616-0.647 OR 3.61 2.53-5.15 3.61 2.53-5.15 3.67 2.84-4.74 3.67 2.84-4.74 3.09 2.58-3.71 3.09 2.58-3.71 2.7 2.34-3.11 2.7 2.34-3.11 2.35 2.09-2.64 2.35 2.09-2.64 1.5 1.24-1.82 3.71e-05 1.87 1.55-2.25 4.74e-11 3.46 2.91-4.12 1.07e-44 True False False True Both 1481 9841 GRCh37/hg19 P<=5e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000452/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000452/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-08-mgi-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-08-mgi-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_MGI_20200608 P_5e-08 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_MGI_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs MGI Michigan Genomics Initiative GWAS Hits GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 30 7.7e-63 0.0420863 0.106 0.63 0.615-0.646 OR 3.95 2.79-5.58 3.95 2.79-5.58 3.27 2.51-4.26 3.27 2.51-4.26 2.77 2.3-3.33 2.77 2.3-3.33 2.48 2.15-2.87 2.48 2.15-2.87 2.21 1.97-2.48 2.21 1.97-2.48 1.56 1.28-1.89 6.77e-06 1.98 1.64-2.38 6e-13 3.35 2.81-3.99 6.89e-42 True False False True Both 1481 9841 GRCh37/hg19 P<=5e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000456/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000456/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-20001-1061-pt-mgi-20200608 prsweb-phecode172-21-20001-1061-pt-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_PT_MGI_20200608 P&T PRSWEB_PHECODE172.21_20001-1061_PT_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 72 1.7e-32 0.0255888 0.108 0.591 0.575-0.607 OR 2.5 1.68-3.71 2.5 1.68-3.71 2.6 1.96-3.46 2.6 1.96-3.46 2.29 1.89-2.78 2.29 1.89-2.78 2.14 1.85-2.49 2.14 1.85-2.49 1.72 1.53-1.93 1.72 1.53-1.93 1.22 1.02-1.46 0.0333 1.6 1.35-1.9 5.81e-08 2.18 1.85-2.56 6.5e-21 True False False True Both 1481 9841 GRCh37/hg19 P<=1e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000447/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000447/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_PT_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_PT_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-20001-1073-pt-mgi-20200608 prsweb-phecode172-21-20001-1073-pt-mgi-20200608 PRSWEB_PHECODE172.21_20001-1073_PT_MGI_20200608 P&T PRSWEB_PHECODE172.21_20001-1073_PT_MGI_20200608 172.21 Cancer code, self-reported: rodent ulcer Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 8 0.0064 0.0014844 0.109 0.504 0.489-0.52 OR 1.42 0.882-2.3 1.42 0.882-2.3 1.35 0.949-1.91 1.35 0.949-1.91 1.19 0.937-1.5 1.19 0.937-1.5 1.07 0.894-1.28 1.07 0.894-1.28 1.1 0.972-1.25 1.1 0.972-1.25 1.11 0.945-1.31 0.2 1.27 1.08-1.49 0.00349 1.24 1.06-1.46 0.00794 True False False True Both 1481 9841 GRCh37/hg19 P<=3.16e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000450/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000450/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1073_PT_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1073_PT_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-bcc-chahal-pt-mgi-20200608 prsweb-phecode172-21-bcc-chahal-pt-mgi-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_PT_MGI_20200608 P&T PRSWEB_PHECODE172.21_BCC-Chahal_PT_MGI_20200608 172.21 Basal cell carcinoma Binary known and novel MGI Michigan Genomics Initiative P&T Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 27 3.1e-67 0.0414549 0.106 0.632 0.616-0.647 OR 3.79 2.68-5.35 3.79 2.68-5.35 3.69 2.86-4.76 3.69 2.86-4.76 2.93 2.44-3.51 2.93 2.44-3.51 2.65 2.29-3.06 2.65 2.29-3.06 2.38 2.13-2.67 2.38 2.13-2.67 1.33 1.09-1.61 0.00426 1.87 1.55-2.24 2.7e-11 3.39 2.85-4.02 3.94e-44 True False False True Both 1481 9841 GRCh37/hg19 P<=3.98e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000454/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000454/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_PT_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_PT_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-pt-mgi-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-pt-mgi-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_MGI_20200608 P&T PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_MGI_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs MGI Michigan Genomics Initiative P&T GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 23 5.4e-62 0.0440364 0.106 0.628 0.612-0.644 OR 4.03 2.86-5.69 4.03 2.86-5.69 3.46 2.67-4.49 3.46 2.67-4.49 3.14 2.63-3.76 3.14 2.63-3.76 2.73 2.37-3.14 2.73 2.37-3.14 2.2 1.96-2.47 2.2 1.96-2.47 1.23 1.01-1.49 0.0356 1.79 1.5-2.14 2.07e-10 3 2.53-3.55 6.69e-37 True False False True Both 1481 9841 GRCh37/hg19 P<=2.51e-10 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000458/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000458/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-20001-1061-prs-cs-mgi-20200608 prsweb-phecode172-21-20001-1061-prs-cs-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_PRS-CS_MGI_20200608 PRS-CS PRSWEB_PHECODE172.21_20001-1061_PRS-CS_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative PRS-CS UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 1111490 4.2e-19 0.0145762 0.109 0.575 0.559-0.591 OR 1.42 0.871-2.33 1.42 0.871-2.33 1.4 0.993-1.97 1.4 0.993-1.97 1.67 1.35-2.07 1.67 1.35-2.07 1.68 1.44-1.97 1.68 1.44-1.97 1.54 1.37-1.73 1.54 1.37-1.73 1.15 0.964-1.37 0.12 1.49 1.26-1.76 2.48e-06 1.87 1.59-2.2 2.36e-14 True False False True Both 1481 9841 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000446/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000446/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_PRS-CS_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_PRS-CS_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-20001-1073-prs-cs-mgi-20200608 prsweb-phecode172-21-20001-1073-prs-cs-mgi-20200608 PRSWEB_PHECODE172.21_20001-1073_PRS-CS_MGI_20200608 PRS-CS PRSWEB_PHECODE172.21_20001-1073_PRS-CS_MGI_20200608 172.21 Cancer code, self-reported: rodent ulcer Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative PRS-CS UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 1073162 0.0016 0.00030855 0.109 0.525 0.509-0.54 OR 1.65 1.04-2.61 1.65 1.04-2.61 1.28 0.901-1.83 1.28 0.901-1.83 1.21 0.954-1.53 1.21 0.954-1.53 1.21 1.02-1.45 1.21 1.02-1.45 1.25 1.11-1.42 1.25 1.11-1.42 1.01 0.864-1.19 0.862 1.01 0.86-1.19 0.893 1.26 1.08-1.47 0.00306 True False False True Both 1481 9841 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000449/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000449/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1073_PRS-CS_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1073_PRS-CS_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-20001-1061-lassosum-mgi-20200608 prsweb-phecode172-21-20001-1061-lassosum-mgi-20200608 PRSWEB_PHECODE172.21_20001-1061_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE172.21_20001-1061_LASSOSUM_MGI_20200608 172.21 Cancer code, self-reported: basal cell carcinoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative lassosum UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 183 2.7e-34 0.02018 0.108 0.587 0.57-0.604 OR 2.93 2.03-4.25 2.93 2.03-4.25 2.83 2.16-3.72 2.83 2.16-3.72 2.32 1.92-2.81 2.32 1.92-2.81 2.07 1.78-2.41 2.07 1.78-2.41 1.94 1.73-2.18 1.94 1.73-2.18 1.27 1.06-1.52 0.00819 1.36 1.14-1.62 0.000668 2.35 2-2.76 4.52e-25 True False False True Both 1481 9841 GRCh37/hg19 s=0.2;Lambda=0.03793 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000448/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000448/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_LASSOSUM_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1061_LASSOSUM_MGI_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-20001-1073-lassosum-mgi-20200608 prsweb-phecode172-21-20001-1073-lassosum-mgi-20200608 PRSWEB_PHECODE172.21_20001-1073_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE172.21_20001-1073_LASSOSUM_MGI_20200608 172.21 Cancer code, self-reported: rodent ulcer Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative lassosum UKB GWAS (PHESANT) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 2231 1.2e-06 0.00278837 0.109 0.521 0.506-0.536 OR 2.44 1.65-3.62 2.44 1.65-3.62 1.94 1.43-2.64 1.94 1.43-2.64 1.62 1.3-2 1.62 1.3-2 1.36 1.15-1.61 1.36 1.15-1.61 1.28 1.13-1.45 1.28 1.13-1.45 1.06 0.896-1.24 0.519 1.1 0.932-1.29 0.265 1.35 1.15-1.58 0.000167 True False False True Both 1481 9841 GRCh37/hg19 s=1;Lambda=0.07848 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000451/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000451/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1073_LASSOSUM_MGI_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_20001-1073_LASSOSUM_MGI_20200608/exclusion.tsv 2020-06-08