prs_id slug legacy_id legacy_model prswebprefix trait_code trait_name trait_type description cohort cohort_label method gwas_source reference_label reference_url snp_count p_value pseudo_r2 brier_score mse aauc aauc_ci effect_metric top_effect_1 top_effect_1_ci top_or_1 top_or_1_ci top_effect_2 top_effect_2_ci top_or_2 top_or_2_ci top_effect_5 top_effect_5_ci top_or_5 top_or_5_ci top_effect_10 top_effect_10_ci top_or_10 top_or_10_ci top_effect_25 top_effect_25_ci top_or_25 top_or_25_ci q1_vs_q2_effect q1_vs_q2_effect_ci q1_vs_q2_p_value q1_vs_q3_effect q1_vs_q3_effect_ci q1_vs_q3_p_value q1_vs_q4_effect q1_vs_q4_effect_ci q1_vs_q4_p_value nominally_significant reversed_effect_warning underpowered_warning upload_to_portal sex cases controls genome_build tuning_parameter weights_external_url weights_url phewas_download_url exclusion_download_url last_updated prsweb-phecode172-21-bcc-chahal-p-5e-05-ukb-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-05-ukb-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-05_UKB_20200608 P_5e-05 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-05_UKB_20200608 172.21 Basal cell carcinoma Binary known and novel UKB UK Biobank Fixed threshold (5e-05) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.1e-185 0.0288777 0.0813 0.611 0.604-0.619 OR 2.8 2.33-3.36 2.8 2.33-3.36 2.73 2.39-3.12 2.73 2.39-3.12 2.23 2.03-2.45 2.23 2.03-2.45 2.2 2.04-2.36 2.2 2.04-2.36 1.98 1.87-2.1 1.98 1.87-2.1 1.43 1.3-1.57 1.9e-13 1.89 1.73-2.07 5.61e-43 2.82 2.59-3.08 3.89e-122 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-05-ukb-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-05-ukb-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-05_UKB_20200608 P_5e-05 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-05_UKB_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs UKB UK Biobank Fixed threshold (5e-05) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 32 5e-201 0.0294605 0.0812 0.618 0.611-0.626 OR 2.95 2.46-3.53 2.95 2.46-3.53 2.69 2.35-3.07 2.69 2.35-3.07 2.34 2.13-2.57 2.34 2.13-2.57 2.17 2.01-2.33 2.17 2.01-2.33 2.03 1.91-2.15 2.03 1.91-2.15 1.5 1.36-1.66 1.95e-16 2.05 1.87-2.24 4.81e-52 3.05 2.79-3.33 5.1e-136 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-06-ukb-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-06-ukb-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-06_UKB_20200608 P_5e-06 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-06_UKB_20200608 172.21 Basal cell carcinoma Binary known and novel UKB UK Biobank Fixed threshold (5e-06) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.1e-185 0.0288777 0.0813 0.611 0.604-0.619 OR 2.8 2.33-3.36 2.8 2.33-3.36 2.73 2.39-3.12 2.73 2.39-3.12 2.23 2.03-2.45 2.23 2.03-2.45 2.2 2.04-2.36 2.2 2.04-2.36 1.98 1.87-2.1 1.98 1.87-2.1 1.43 1.3-1.57 1.9e-13 1.89 1.73-2.07 5.61e-43 2.82 2.59-3.08 3.89e-122 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-06-ukb-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-06-ukb-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-06_UKB_20200608 P_5e-06 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-06_UKB_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs UKB UK Biobank Fixed threshold (5e-06) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 32 5e-201 0.0294605 0.0812 0.618 0.611-0.626 OR 2.95 2.46-3.53 2.95 2.46-3.53 2.69 2.35-3.07 2.69 2.35-3.07 2.34 2.13-2.57 2.34 2.13-2.57 2.17 2.01-2.33 2.17 2.01-2.33 2.03 1.91-2.15 2.03 1.91-2.15 1.5 1.36-1.66 1.95e-16 2.05 1.87-2.24 4.81e-52 3.05 2.79-3.33 5.1e-136 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-07-ukb-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-07-ukb-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-07_UKB_20200608 P_5e-07 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-07_UKB_20200608 172.21 Basal cell carcinoma Binary known and novel UKB UK Biobank Fixed threshold (5e-07) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.1e-185 0.0288777 0.0813 0.611 0.604-0.619 OR 2.8 2.33-3.36 2.8 2.33-3.36 2.73 2.39-3.12 2.73 2.39-3.12 2.23 2.03-2.45 2.23 2.03-2.45 2.2 2.04-2.36 2.2 2.04-2.36 1.98 1.87-2.1 1.98 1.87-2.1 1.43 1.3-1.57 1.9e-13 1.89 1.73-2.07 5.61e-43 2.82 2.59-3.08 3.89e-122 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-07-ukb-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-07-ukb-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-07_UKB_20200608 P_5e-07 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-07_UKB_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs UKB UK Biobank Fixed threshold (5e-07) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 31 1.2e-196 0.0290503 0.0812 0.617 0.61-0.625 OR 3.03 2.53-3.62 3.03 2.53-3.62 2.76 2.42-3.15 2.76 2.42-3.15 2.33 2.12-2.56 2.33 2.12-2.56 2.19 2.03-2.35 2.19 2.03-2.35 2.03 1.92-2.16 2.03 1.92-2.16 1.5 1.36-1.65 2.84e-16 1.97 1.79-2.16 7.57e-47 3 2.75-3.28 6.45e-134 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-09-ukb-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-09-ukb-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-09_UKB_20200608 P_5e-09 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-09_UKB_20200608 172.21 Basal cell carcinoma Binary known and novel UKB UK Biobank Fixed threshold (5e-09) Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 22 1.2e-165 0.0272616 0.0815 0.604 0.597-0.612 OR 2.68 2.23-3.23 2.68 2.23-3.23 2.5 2.18-2.87 2.5 2.18-2.87 2.17 1.97-2.39 2.17 1.97-2.39 2.05 1.9-2.2 2.05 1.9-2.2 1.91 1.8-2.03 1.91 1.8-2.03 1.42 1.29-1.56 2.7e-13 1.84 1.68-2.01 6.24e-40 2.68 2.46-2.93 5.57e-112 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-09 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-09-ukb-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-09-ukb-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-09_UKB_20200608 P_5e-09 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-09_UKB_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs UKB UK Biobank Fixed threshold (5e-09) GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 24 2.3e-191 0.0299216 0.0813 0.615 0.608-0.623 OR 3.05 2.55-3.64 3.05 2.55-3.64 2.73 2.39-3.12 2.73 2.39-3.12 2.34 2.13-2.57 2.34 2.13-2.57 2.2 2.04-2.36 2.2 2.04-2.36 2.01 1.89-2.13 2.01 1.89-2.13 1.5 1.36-1.65 1.52e-16 1.98 1.8-2.17 1.26e-47 2.97 2.72-3.24 5.54e-131 True False False False Both 5450 54568 GRCh37/hg19 P<=5e-09 2020-06-08 prsweb-phecode172-21-bcc-chahal-p-5e-08-ukb-20200608 prsweb-phecode172-21-bcc-chahal-p-5e-08-ukb-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_UKB_20200608 P_5e-08 PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_UKB_20200608 172.21 Basal cell carcinoma Binary known and novel UKB UK Biobank GWAS Hits Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.1e-185 0.0288777 0.0813 0.611 0.604-0.619 OR 2.8 2.33-3.36 2.8 2.33-3.36 2.73 2.39-3.12 2.73 2.39-3.12 2.23 2.03-2.45 2.23 2.03-2.45 2.2 2.04-2.36 2.2 2.04-2.36 1.98 1.87-2.1 1.98 1.87-2.1 1.43 1.3-1.57 1.9e-13 1.89 1.73-2.07 5.61e-43 2.82 2.59-3.08 3.89e-122 True False False True Both 5450 54568 GRCh37/hg19 P<=5e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000453/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000453/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_UKB_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_P_5e-08_UKB_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-08-ukb-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-p-5e-08-ukb-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_UKB_20200608 P_5e-08 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_UKB_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs UKB UK Biobank GWAS Hits GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 30 8.6e-196 0.0286856 0.0813 0.617 0.609-0.625 OR 3.11 2.6-3.71 3.11 2.6-3.71 2.62 2.28-3 2.62 2.28-3 2.32 2.11-2.54 2.32 2.11-2.54 2.17 2.01-2.33 2.17 2.01-2.33 2 1.89-2.12 2 1.89-2.12 1.52 1.38-1.67 2.18e-17 2.02 1.84-2.22 1.43e-50 3.02 2.76-3.3 1.1e-133 True False False True Both 5450 54568 GRCh37/hg19 P<=5e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000457/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000457/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_UKB_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_P_5e-08_UKB_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-bcc-chahal-pt-ukb-20200608 prsweb-phecode172-21-bcc-chahal-pt-ukb-20200608 PRSWEB_PHECODE172.21_BCC-Chahal_PT_UKB_20200608 P&T PRSWEB_PHECODE172.21_BCC-Chahal_PT_UKB_20200608 172.21 Basal cell carcinoma Binary known and novel UKB UK Biobank P&T Chahal HS et al. 2018 27539887 https://www.ncbi.nlm.nih.gov/pubmed/?term=27539887 28 2.1e-185 0.0288777 0.0813 0.611 0.604-0.619 OR 2.8 2.33-3.36 2.8 2.33-3.36 2.73 2.39-3.12 2.73 2.39-3.12 2.23 2.03-2.45 2.23 2.03-2.45 2.2 2.04-2.36 2.2 2.04-2.36 1.98 1.87-2.1 1.98 1.87-2.1 1.43 1.3-1.57 1.9e-13 1.89 1.73-2.07 5.61e-43 2.82 2.59-3.08 3.89e-122 True False False True Both 5450 54568 GRCh37/hg19 P<=4.2e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000455/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000455/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_PT_UKB_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_BCC-Chahal_PT_UKB_20200608/exclusion.tsv 2020-06-08 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-pt-ukb-20200608 prsweb-phecode172-21-gwas-catalog-r2019-05-03-x172-21-pt-ukb-20200608 PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_UKB_20200608 P&T PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_UKB_20200608 172.21 Basal cell carcinoma Binary 39 unique SNPs UKB UK Biobank P&T GWAS Catalog (2019-05-03) 18849993;19151717;21700618;24403052;25855136;27539887;28177523 https://www.ncbi.nlm.nih.gov/pubmed/?term=18849993+19151717+21700618+24403052+25855136+27539887+28177523 24 2.3e-191 0.0299216 0.0813 0.615 0.608-0.623 OR 3.05 2.55-3.64 3.05 2.55-3.64 2.73 2.39-3.12 2.73 2.39-3.12 2.34 2.13-2.57 2.34 2.13-2.57 2.2 2.04-2.36 2.2 2.04-2.36 2.01 1.89-2.13 2.01 1.89-2.13 1.5 1.36-1.65 1.52e-16 1.98 1.8-2.17 1.26e-47 2.97 2.72-3.24 5.54e-131 True False False True Both 5450 54568 GRCh37/hg19 P<=5e-09 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000459/ScoringFiles/ https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000459/ScoringFiles/ /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_UKB_20200608/all.tsv /larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.21_GWAS-Catalog-r2019-05-03-X172.21_PT_UKB_20200608/exclusion.tsv 2020-06-08