prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode172-3-d04-p-5e-05-mgi-20200608	prsweb-phecode172-3-d04-p-5e-05-mgi-20200608	PRSWEB_PHECODE172.3_D04_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE172.3_D04_P_5e-05_MGI_20200608	172.3	Diagnoses - main ICD10: D04 Carcinoma in situ of skin	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	92	0.73	0.00105754	0.094		0.498	0.475-0.522	OR	0.768	0.289-2.05	0.768	0.289-2.05	1.19	0.664-2.12	1.19	0.664-2.12	1.23	0.857-1.78	1.23	0.857-1.78	0.963	0.72-1.29	0.963	0.72-1.29	0.942	0.77-1.15	0.942	0.77-1.15	1.2	0.943-1.53	0.137	1.15	0.895-1.47	0.281	1.05	0.817-1.35	0.7	False	False	False	False	Both	585	4915	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode172-3-ukbb-saige-hrc-x172-3-p-5e-05-mgi-20200608	prsweb-phecode172-3-ukbb-saige-hrc-x172-3-p-5e-05-mgi-20200608	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_P_5e-05_MGI_20200608	172.3	Carcinoma in situ of skin	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	99	0.0011	0.00623408	0.0938		0.535	0.511-0.559	OR	1.9	1.01-3.58	1.9	1.01-3.58	1.57	0.955-2.59	1.57	0.955-2.59	1.2	0.84-1.73	1.2	0.84-1.73	1.22	0.93-1.59	1.22	0.93-1.59	1.26	1.05-1.53	1.26	1.05-1.53	1.33	1.03-1.71	0.0298	1.32	1.02-1.71	0.0346	1.53	1.19-1.96	0.000909	True	False	False	False	Both	585	4915	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode172-3-d04-p-5e-06-mgi-20200608	prsweb-phecode172-3-d04-p-5e-06-mgi-20200608	PRSWEB_PHECODE172.3_D04_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE172.3_D04_P_5e-06_MGI_20200608	172.3	Diagnoses - main ICD10: D04 Carcinoma in situ of skin	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	12	0.25	0.000585282	0.094		0.499	0.474-0.524	OR	1.46	0.693-3.07	1.46	0.693-3.07	1.39	0.817-2.37	1.39	0.817-2.37	1.3	0.91-1.86	1.3	0.91-1.86	1.17	0.89-1.53	1.17	0.89-1.53	1.09	0.898-1.33	1.09	0.898-1.33	1.08	0.842-1.38	0.556	1.02	0.796-1.31	0.872	1.13	0.884-1.44	0.332	False	False	False	False	Both	585	4915	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode172-3-ukbb-saige-hrc-x172-3-p-5e-06-mgi-20200608	prsweb-phecode172-3-ukbb-saige-hrc-x172-3-p-5e-06-mgi-20200608	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_P_5e-06_MGI_20200608	172.3	Carcinoma in situ of skin	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	14	6.2e-08	0.0124194	0.0934		0.556	0.531-0.583	OR	2.47	1.35-4.5	2.47	1.35-4.5	2.12	1.34-3.35	2.12	1.34-3.35	1.7	1.22-2.35	1.7	1.22-2.35	1.56	1.22-2.01	1.56	1.22-2.01	1.62	1.35-1.94	1.62	1.35-1.94	1.29	0.992-1.68	0.057	1.26	0.966-1.64	0.0884	1.93	1.5-2.47	2.06e-07	True	False	False	False	Both	585	4915	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode172-3-ukbb-saige-hrc-x172-3-p-5e-07-mgi-20200608	prsweb-phecode172-3-ukbb-saige-hrc-x172-3-p-5e-07-mgi-20200608	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_P_5e-07_MGI_20200608	P_5e-07	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_P_5e-07_MGI_20200608	172.3	Carcinoma in situ of skin	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-07)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	5	3.9e-11	0.0262057	0.093		0.557	0.531-0.582	OR	2.45	1.34-4.45	2.45	1.34-4.45	2.8	1.85-4.24	2.8	1.85-4.24	2.55	1.92-3.39	2.55	1.92-3.39	1.87	1.48-2.37	1.87	1.48-2.37	1.71	1.43-2.05	1.71	1.43-2.05	1.23	0.944-1.61	0.124	1.27	0.97-1.65	0.0826	2	1.57-2.56	3.04e-08	True	False	False	False	Both	585	4915	GRCh37/hg19	P<=5e-07					2020-06-08
prsweb-phecode172-3-d04-pt-mgi-20200608	prsweb-phecode172-3-d04-pt-mgi-20200608	PRSWEB_PHECODE172.3_D04_PT_MGI_20200608	P&T	PRSWEB_PHECODE172.3_D04_PT_MGI_20200608	172.3	Diagnoses - main ICD10: D04 Carcinoma in situ of skin	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	65	0.43	0.00206257	0.094		0.503	0.479-0.528	OR	0.9	0.368-2.2	0.9	0.368-2.2	0.742	0.365-1.51	0.742	0.365-1.51	0.938	0.625-1.41	0.938	0.625-1.41	1.13	0.859-1.49	1.13	0.859-1.49	1.12	0.919-1.35	1.12	0.919-1.35	1.05	0.823-1.34	0.688	1.01	0.787-1.29	0.942	1.14	0.891-1.45	0.306	False	False	False	False	Both	585	4915	GRCh37/hg19	P<=3.16e-05					2020-06-08
prsweb-phecode172-3-ukbb-saige-hrc-x172-3-pt-mgi-20200608	prsweb-phecode172-3-ukbb-saige-hrc-x172-3-pt-mgi-20200608	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PT_MGI_20200608	P&T	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PT_MGI_20200608	172.3	Carcinoma in situ of skin	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	5	3.9e-11	0.0262057	0.093		0.557	0.531-0.582	OR	2.45	1.34-4.45	2.45	1.34-4.45	2.8	1.85-4.24	2.8	1.85-4.24	2.55	1.92-3.39	2.55	1.92-3.39	1.87	1.48-2.37	1.87	1.48-2.37	1.71	1.43-2.05	1.71	1.43-2.05	1.23	0.944-1.61	0.124	1.27	0.97-1.65	0.0826	2	1.57-2.56	3.04e-08	True	False	False	True	Both	585	4915	GRCh37/hg19	P<=5e-07	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000470/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000470/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PT_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PT_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode172-3-d04-prs-cs-mgi-20200608	prsweb-phecode172-3-d04-prs-cs-mgi-20200608	PRSWEB_PHECODE172.3_D04_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE172.3_D04_PRS-CS_MGI_20200608	172.3	Diagnoses - main ICD10: D04 Carcinoma in situ of skin	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1065239	0.077	0.000107125	0.0939		0.521	0.495-0.546	OR	1.24	0.57-2.72	1.24	0.57-2.72	1.47	0.861-2.5	1.47	0.861-2.5	1.35	0.944-1.93	1.35	0.944-1.93	1.11	0.842-1.47	1.11	0.842-1.47	1.1	0.908-1.34	1.1	0.908-1.34	0.989	0.767-1.27	0.929	1.25	0.979-1.59	0.0744	1.17	0.912-1.49	0.221	False	False	False	False	Both	585	4915	GRCh37/hg19	auto					2020-06-08
prsweb-phecode172-3-ukbb-saige-hrc-x172-3-prs-cs-mgi-20200608	prsweb-phecode172-3-ukbb-saige-hrc-x172-3-prs-cs-mgi-20200608	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PRS-CS_MGI_20200608	172.3	Carcinoma in situ of skin	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.048	0.00263471	0.0939		0.524	0.499-0.549	OR	1.48	0.703-3.1	1.48	0.703-3.1	1.46	0.855-2.49	1.46	0.855-2.49	1.33	0.927-1.9	1.33	0.927-1.9	1.2	0.913-1.57	1.2	0.913-1.57	1.22	1.01-1.47	1.22	1.01-1.47	1.25	0.972-1.6	0.0826	1.13	0.877-1.46	0.343	1.36	1.06-1.74	0.0142	True	False	False	True	Both	585	4915	GRCh37/hg19	auto	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000469/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000469/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PRS-CS_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_PRS-CS_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode172-3-d04-lassosum-mgi-20200608	prsweb-phecode172-3-d04-lassosum-mgi-20200608	PRSWEB_PHECODE172.3_D04_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE172.3_D04_LASSOSUM_MGI_20200608	172.3	Diagnoses - main ICD10: D04 Carcinoma in situ of skin	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	118	0.51	0.00389185	0.094		0.504	0.48-0.528	OR	1.1	0.481-2.54	1.1	0.481-2.54	1.07	0.588-1.95	1.07	0.588-1.95	0.968	0.645-1.45	0.968	0.645-1.45	0.978	0.731-1.31	0.978	0.731-1.31	1.02	0.84-1.25	1.02	0.84-1.25	1.17	0.91-1.49	0.224	1.18	0.921-1.51	0.193	1.12	0.873-1.44	0.371	False	False	False	False	Both	585	4915	GRCh37/hg19	s=0.2;Lambda=0.1					2020-06-08
prsweb-phecode172-3-ukbb-saige-hrc-x172-3-lassosum-mgi-20200608	prsweb-phecode172-3-ukbb-saige-hrc-x172-3-lassosum-mgi-20200608	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_LASSOSUM_MGI_20200608	172.3	Carcinoma in situ of skin	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	7	9.2e-18	0.0410713	0.0923		0.569	0.541-0.595	OR	3.77	2.24-6.34	3.77	2.24-6.34	3.17	2.12-4.75	3.17	2.12-4.75	2.89	2.21-3.78	2.89	2.21-3.78	2.35	1.88-2.93	2.35	1.88-2.93	1.84	1.54-2.21	1.84	1.54-2.21	1.05	0.71-1.54	0.823	1.22	0.827-1.79	0.319	1.98	1.37-2.87	0.00027	True	False	False	True	Both	585	4915	GRCh37/hg19	s=0.2;Lambda=0.1	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000471/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000471/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_LASSOSUM_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE172.3_UKBB-SAIGE-HRC-X172.3_LASSOSUM_MGI_20200608/exclusion.tsv	2020-06-08