prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode180-3-20001-1072-p-5e-05-mgi-20200608	prsweb-phecode180-3-20001-1072-p-5e-05-mgi-20200608	PRSWEB_PHECODE180.3_20001-1072_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE180.3_20001-1072_P_5e-05_MGI_20200608	180.3	Cancer code, self-reported: cin/pre-cancer cells cervix	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	132	0.084	0.000217336	0.0885		0.519	0.49-0.548	OR	1.25	0.504-3.09	1.25	0.504-3.09	1.21	0.628-2.33	1.21	0.628-2.33	0.844	0.518-1.38	0.844	0.518-1.38	1.19	0.872-1.63	1.19	0.872-1.63	1.13	0.905-1.42	1.13	0.905-1.42	1.13	0.84-1.51	0.429	1.24	0.931-1.65	0.141	1.25	0.941-1.67	0.122	False	False	False	False	Female	430	3939	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode180-3-20001-1072-p-5e-06-mgi-20200608	prsweb-phecode180-3-20001-1072-p-5e-06-mgi-20200608	PRSWEB_PHECODE180.3_20001-1072_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE180.3_20001-1072_P_5e-06_MGI_20200608	180.3	Cancer code, self-reported: cin/pre-cancer cells cervix	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	28	0.27	0.000156027	0.0885		0.503	0.475-0.533	OR	0.739	0.244-2.24	0.739	0.244-2.24	0.728	0.324-1.63	0.728	0.324-1.63	1.13	0.733-1.74	1.13	0.733-1.74	1.13	0.826-1.56	1.13	0.826-1.56	1.09	0.868-1.36	1.09	0.868-1.36	1.04	0.781-1.4	0.768	1.17	0.885-1.55	0.267	1.17	0.879-1.55	0.286	False	False	False	False	Female	430	3939	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode180-3-20001-1072-p-5e-07-mgi-20200608	prsweb-phecode180-3-20001-1072-p-5e-07-mgi-20200608	PRSWEB_PHECODE180.3_20001-1072_P_5e-07_MGI_20200608	P_5e-07	PRSWEB_PHECODE180.3_20001-1072_P_5e-07_MGI_20200608	180.3	Cancer code, self-reported: cin/pre-cancer cells cervix	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-07)	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	5	0.04	0.000575173	0.0885		0.514	0.486-0.543	OR	0.777	0.257-2.35	0.777	0.257-2.35	1.22	0.635-2.35	1.22	0.635-2.35	0.942	0.591-1.5	0.942	0.591-1.5	0.959	0.685-1.34	0.959	0.685-1.34	1.38	1.11-1.71	1.38	1.11-1.71	1.23	0.912-1.66	0.175	1.22	0.904-1.64	0.196	1.59	1.19-2.11	0.00148	True	False	False	False	Female	430	3939	GRCh37/hg19	P<=5e-07					2020-06-08
prsweb-phecode180-3-20001-1072-pt-mgi-20200608	prsweb-phecode180-3-20001-1072-pt-mgi-20200608	PRSWEB_PHECODE180.3_20001-1072_PT_MGI_20200608	P&T	PRSWEB_PHECODE180.3_20001-1072_PT_MGI_20200608	180.3	Cancer code, self-reported: cin/pre-cancer cells cervix	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	10	0.35	0.000792041	0.0885		0.493	0.465-0.522	OR	1.73	0.784-3.84	1.73	0.784-3.84	1.11	0.56-2.2	1.11	0.56-2.2	1.1	0.709-1.71	1.1	0.709-1.71	0.965	0.689-1.35	0.965	0.689-1.35	1.07	0.857-1.35	1.07	0.857-1.35	0.908	0.679-1.22	0.517	1.14	0.862-1.5	0.361	1.09	0.826-1.45	0.535	False	False	False	False	Female	430	3939	GRCh37/hg19	P<=1e-06					2020-06-08
prsweb-phecode180-3-20001-1072-prs-cs-mgi-20200608	prsweb-phecode180-3-20001-1072-prs-cs-mgi-20200608	PRSWEB_PHECODE180.3_20001-1072_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE180.3_20001-1072_PRS-CS_MGI_20200608	180.3	Cancer code, self-reported: cin/pre-cancer cells cervix	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1105412	0.2	0.00389388	0.0885		0.525	0.498-0.553	OR	0.536	0.147-1.95	0.536	0.147-1.95	1.2	0.624-2.31	1.2	0.624-2.31	1.36	0.904-2.04	1.36	0.904-2.04	1.14	0.832-1.57	1.14	0.832-1.57	1.1	0.882-1.38	1.1	0.882-1.38	0.964	0.72-1.29	0.804	1.18	0.887-1.56	0.261	1.16	0.873-1.53	0.311	False	False	False	False	Female	430	3939	GRCh37/hg19	auto					2020-06-08
prsweb-phecode180-3-20001-1072-lassosum-mgi-20200608	prsweb-phecode180-3-20001-1072-lassosum-mgi-20200608	PRSWEB_PHECODE180.3_20001-1072_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE180.3_20001-1072_LASSOSUM_MGI_20200608	180.3	Cancer code, self-reported: cin/pre-cancer cells cervix	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	5850633	0.17	0.00486203	0.0885		0.525	0.496-0.555	OR	0.801	0.265-2.43	0.801	0.265-2.43	1.22	0.634-2.35	1.22	0.634-2.35	1.15	0.747-1.77	1.15	0.747-1.77	1.31	0.967-1.77	1.31	0.967-1.77	1.2	0.961-1.5	1.2	0.961-1.5	0.974	0.73-1.3	0.861	1.03	0.771-1.37	0.86	1.21	0.918-1.6	0.176	False	False	False	False	Female	430	3939	GRCh37/hg19	s=1;Lambda=0.001					2020-06-08
prsweb-phecode180-3-ukbb-saige-hrc-x180-3-lassosum-mgi-20200608	prsweb-phecode180-3-ukbb-saige-hrc-x180-3-lassosum-mgi-20200608	PRSWEB_PHECODE180.3_UKBB-SAIGE-HRC-X180.3_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE180.3_UKBB-SAIGE-HRC-X180.3_LASSOSUM_MGI_20200608	180.3	Cervical intraepithelial neoplasia [CIN] [Cervical dysplasia]	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	38	0.99	0.00379566	0.0886		0.519	0.49-0.549	OR	0.334	0.0641-1.74	0.334	0.0641-1.74	0.521	0.2-1.36	0.521	0.2-1.36	0.718	0.424-1.22	0.718	0.424-1.22	0.898	0.634-1.27	0.898	0.634-1.27	0.92	0.728-1.16	0.92	0.728-1.16	0.937	0.703-1.25	0.653	1.15	0.878-1.52	0.303	0.953	0.716-1.27	0.741	False	False	False	False	Female	430	3939	GRCh37/hg19	s=0.5;Lambda=0.04833					2020-06-08