prs_id slug legacy_id legacy_model prswebprefix trait_code trait_name trait_type description cohort cohort_label method gwas_source reference_label reference_url snp_count p_value pseudo_r2 brier_score mse aauc aauc_ci effect_metric top_effect_1 top_effect_1_ci top_or_1 top_or_1_ci top_effect_2 top_effect_2_ci top_or_2 top_or_2_ci top_effect_5 top_effect_5_ci top_or_5 top_or_5_ci top_effect_10 top_effect_10_ci top_or_10 top_or_10_ci top_effect_25 top_effect_25_ci top_or_25 top_or_25_ci q1_vs_q2_effect q1_vs_q2_effect_ci q1_vs_q2_p_value q1_vs_q3_effect q1_vs_q3_effect_ci q1_vs_q3_p_value q1_vs_q4_effect q1_vs_q4_effect_ci q1_vs_q4_p_value nominally_significant reversed_effect_warning underpowered_warning upload_to_portal sex cases controls genome_build tuning_parameter weights_external_url weights_url phewas_download_url exclusion_download_url last_updated prsweb-phecode202-c-lymphoma-p-5e-05-mgi-20200608 prsweb-phecode202-c-lymphoma-p-5e-05-mgi-20200608 PRSWEB_PHECODE202_C-LYMPHOMA_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE202_C-LYMPHOMA_P_5e-05_MGI_20200608 202 Lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 140 0.14 0.000805521 0.0827 0.511 0.489-0.534 OR 0.835 0.347-2.01 0.835 0.347-2.01 0.962 0.534-1.73 0.962 0.534-1.73 1.3 0.932-1.82 1.3 0.932-1.82 1.19 0.928-1.54 1.19 0.928-1.54 1.16 0.967-1.39 1.16 0.967-1.39 1.06 0.838-1.33 0.645 0.984 0.778-1.24 0.894 1.17 0.937-1.47 0.162 False False False False Both 643 6422 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode202-c-nonfollicular-lymphoma-p-5e-05-mgi-20200608 prsweb-phecode202-c-nonfollicular-lymphoma-p-5e-05-mgi-20200608 PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_P_5e-05_MGI_20200608 202 Non-follicular lymphoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 123 0.16 0.00040313 0.0827 0.512 0.489-0.535 OR 0.826 0.343-1.99 0.826 0.343-1.99 1.36 0.818-2.25 1.36 0.818-2.25 1.04 0.72-1.5 1.04 0.72-1.5 1 0.763-1.31 1 0.763-1.31 1.05 0.876-1.27 1.05 0.876-1.27 1.16 0.922-1.47 0.201 1.17 0.925-1.47 0.193 1.17 0.927-1.48 0.185 False False False False Both 643 6422 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode202-c-tnk-lymphoma-p-5e-05-mgi-20200608 prsweb-phecode202-c-tnk-lymphoma-p-5e-05-mgi-20200608 PRSWEB_PHECODE202_C-TNK-LYMPHOMA_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE202_C-TNK-LYMPHOMA_P_5e-05_MGI_20200608 202 Mature T/NK-cell lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 50 0.24 0.000405439 0.0827 0.512 0.487-0.535 OR 1.14 0.53-2.44 1.14 0.53-2.44 1.43 0.872-2.35 1.43 0.872-2.35 1.43 1.04-1.98 1.43 1.04-1.98 1.22 0.953-1.57 1.22 0.953-1.57 1.26 1.05-1.5 1.26 1.05-1.5 0.801 0.632-1.02 0.0667 0.909 0.722-1.14 0.413 1.14 0.917-1.42 0.237 False False False False Both 643 6422 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-p-5e-05-mgi-20200608 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-p-5e-05-mgi-20200608 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_P_5e-05_MGI_20200608 202 Marginal zone lymphoma;Waldenström macroglobulinemia / lymphoplasmacytic lymphoma Binary 7 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-05) GWAS Catalog (2019-05-03) 25569183;30305637 https://www.ncbi.nlm.nih.gov/pubmed/?term=25569183+30305637 7 0.43 0.000432702 0.0827 0.46 0.441-0.48 OR 1.78 0.943-3.36 1.78 0.943-3.36 1.6 0.997-2.57 1.6 0.997-2.57 1.3 0.93-1.81 1.3 0.93-1.81 1.01 0.775-1.32 1.01 0.775-1.32 1 0.832-1.21 1 0.832-1.21 0.913 0.668-1.25 0.568 0.994 0.73-1.35 0.969 0.971 0.712-1.33 0.855 False False False False Both 643 6422 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode202-ukbb-saige-hrc-x202-p-5e-05-mgi-20200608 prsweb-phecode202-ukbb-saige-hrc-x202-p-5e-05-mgi-20200608 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_P_5e-05_MGI_20200608 P_5e-05 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_P_5e-05_MGI_20200608 202 Cancer of other lymphoid, histiocytic tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative Fixed threshold (5e-05) UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 111 0.67 1.22362e-05 0.0827 0.502 0.479-0.526 OR 0.987 0.437-2.23 0.987 0.437-2.23 1.19 0.7-2.04 1.19 0.7-2.04 1.13 0.793-1.6 1.13 0.793-1.6 1.22 0.948-1.57 1.22 0.948-1.57 1.05 0.872-1.26 1.05 0.872-1.26 0.865 0.686-1.09 0.217 0.954 0.761-1.2 0.681 0.984 0.787-1.23 0.89 False False False False Both 643 6422 GRCh37/hg19 P<=5e-05 2020-06-08 prsweb-phecode202-c-lymphoma-p-5e-06-mgi-20200608 prsweb-phecode202-c-lymphoma-p-5e-06-mgi-20200608 PRSWEB_PHECODE202_C-LYMPHOMA_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE202_C-LYMPHOMA_P_5e-06_MGI_20200608 202 Lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 30 0.071 0.00033857 0.0827 0.509 0.489-0.533 OR 0.836 0.347-2.01 0.836 0.347-2.01 1.04 0.588-1.83 1.04 0.588-1.83 0.94 0.643-1.38 0.94 0.643-1.38 1.09 0.837-1.41 1.09 0.837-1.41 1.17 0.973-1.4 1.17 0.973-1.4 1.07 0.846-1.36 0.566 1.13 0.897-1.43 0.296 1.25 0.997-1.58 0.0532 False False False False Both 643 6422 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode202-c-nonfollicular-lymphoma-p-5e-06-mgi-20200608 prsweb-phecode202-c-nonfollicular-lymphoma-p-5e-06-mgi-20200608 PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_P_5e-06_MGI_20200608 202 Non-follicular lymphoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 18 0.51 0.000982517 0.0827 0.495 0.472-0.519 OR 0.675 0.257-1.77 0.675 0.257-1.77 1.27 0.757-2.14 1.27 0.757-2.14 1.07 0.749-1.54 1.07 0.749-1.54 1.04 0.794-1.35 1.04 0.794-1.35 1.05 0.876-1.27 1.05 0.876-1.27 1.15 0.911-1.44 0.244 1.04 0.824-1.32 0.736 1.11 0.883-1.4 0.367 False False False False Both 643 6422 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode202-c-primary-lymphoid-hematopoietic-p-5e-06-mgi-20200608 prsweb-phecode202-c-primary-lymphoid-hematopoietic-p-5e-06-mgi-20200608 PRSWEB_PHECODE202_C-PRIMARY-LYMPHOID-HEMATOPOIETIC_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE202_C-PRIMARY-LYMPHOID-HEMATOPOIETIC_P_5e-06_MGI_20200608 202 Primary_lymphoid and hematopoietic malignant neoplasms Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 19 0.55 8.622e-06 0.0827 0.487 0.464-0.509 OR 0.838 0.348-2.02 0.838 0.348-2.02 0.805 0.426-1.52 0.805 0.426-1.52 0.91 0.619-1.34 0.91 0.619-1.34 0.913 0.691-1.21 0.913 0.691-1.21 0.976 0.809-1.18 0.976 0.809-1.18 1.35 1.07-1.71 0.0126 1.31 1.04-1.66 0.0235 1.19 0.936-1.51 0.155 False False False False Both 643 6422 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode202-c-tnk-lymphoma-p-5e-06-mgi-20200608 prsweb-phecode202-c-tnk-lymphoma-p-5e-06-mgi-20200608 PRSWEB_PHECODE202_C-TNK-LYMPHOMA_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE202_C-TNK-LYMPHOMA_P_5e-06_MGI_20200608 202 Mature T/NK-cell lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 10 0.35 3.74868e-05 0.0827 0.502 0.479-0.526 OR 1.31 0.636-2.7 1.31 0.636-2.7 1.2 0.703-2.05 1.2 0.703-2.05 1.17 0.825-1.66 1.17 0.825-1.66 1.25 0.972-1.6 1.25 0.972-1.6 1.15 0.959-1.38 1.15 0.959-1.38 0.95 0.755-1.2 0.664 0.894 0.708-1.13 0.345 1.09 0.872-1.36 0.453 False False False False Both 643 6422 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-p-5e-06-mgi-20200608 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-p-5e-06-mgi-20200608 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_P_5e-06_MGI_20200608 202 Marginal zone lymphoma;Waldenström macroglobulinemia / lymphoplasmacytic lymphoma Binary 7 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-06) GWAS Catalog (2019-05-03) 25569183;30305637 https://www.ncbi.nlm.nih.gov/pubmed/?term=25569183+30305637 7 0.43 0.000432702 0.0827 0.46 0.441-0.48 OR 1.78 0.943-3.36 1.78 0.943-3.36 1.6 0.997-2.57 1.6 0.997-2.57 1.3 0.93-1.81 1.3 0.93-1.81 1.01 0.775-1.32 1.01 0.775-1.32 1 0.832-1.21 1 0.832-1.21 0.913 0.668-1.25 0.568 0.994 0.73-1.35 0.969 0.971 0.712-1.33 0.855 False False False False Both 643 6422 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode202-ukbb-saige-hrc-x202-p-5e-06-mgi-20200608 prsweb-phecode202-ukbb-saige-hrc-x202-p-5e-06-mgi-20200608 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_P_5e-06_MGI_20200608 P_5e-06 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_P_5e-06_MGI_20200608 202 Cancer of other lymphoid, histiocytic tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative Fixed threshold (5e-06) UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 17 0.24 0.000139769 0.0827 0.51 0.486-0.533 OR 0.982 0.435-2.22 0.982 0.435-2.22 0.873 0.475-1.61 0.873 0.475-1.61 0.999 0.69-1.45 0.999 0.69-1.45 0.945 0.718-1.24 0.945 0.718-1.24 1.1 0.913-1.32 1.1 0.913-1.32 1.22 0.963-1.54 0.1 1.15 0.911-1.46 0.237 1.23 0.973-1.55 0.0839 False False False False Both 643 6422 GRCh37/hg19 P<=5e-06 2020-06-08 prsweb-phecode202-c-lymphoma-p-5e-07-mgi-20200608 prsweb-phecode202-c-lymphoma-p-5e-07-mgi-20200608 PRSWEB_PHECODE202_C-LYMPHOMA_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE202_C-LYMPHOMA_P_5e-07_MGI_20200608 202 Lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-07) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 8 0.3 0.000959855 0.0827 0.493 0.47-0.515 OR 1.14 0.532-2.45 1.14 0.532-2.45 1.28 0.759-2.15 1.28 0.759-2.15 1.1 0.773-1.58 1.1 0.773-1.58 1.03 0.793-1.35 1.03 0.793-1.35 0.977 0.81-1.18 0.977 0.81-1.18 1.32 1.05-1.67 0.0194 1.25 0.985-1.58 0.0659 1.14 0.9-1.45 0.272 False False False False Both 643 6422 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode202-c-primary-lymphoid-hematopoietic-p-5e-07-mgi-20200608 prsweb-phecode202-c-primary-lymphoid-hematopoietic-p-5e-07-mgi-20200608 PRSWEB_PHECODE202_C-PRIMARY-LYMPHOID-HEMATOPOIETIC_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE202_C-PRIMARY-LYMPHOID-HEMATOPOIETIC_P_5e-07_MGI_20200608 202 Primary_lymphoid and hematopoietic malignant neoplasms Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative Fixed threshold (5e-07) UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 8 0.6 0.000144789 0.0827 0.477 0.456-0.497 OR 0.686 0.261-1.8 0.686 0.261-1.8 0.965 0.536-1.74 0.965 0.536-1.74 1.01 0.695-1.46 1.01 0.695-1.46 0.932 0.707-1.23 0.932 0.707-1.23 1.03 0.853-1.24 1.03 0.853-1.24 1 0.787-1.27 0.998 1.11 0.876-1.4 0.392 1.07 0.842-1.35 0.592 False False False False Both 643 6422 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-p-5e-07-mgi-20200608 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-p-5e-07-mgi-20200608 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_P_5e-07_MGI_20200608 202 Marginal zone lymphoma;Waldenström macroglobulinemia / lymphoplasmacytic lymphoma Binary 7 unique SNPs MGI Michigan Genomics Initiative Fixed threshold (5e-07) GWAS Catalog (2019-05-03) 25569183;30305637 https://www.ncbi.nlm.nih.gov/pubmed/?term=25569183+30305637 5 0.43 0.000323159 0.0827 0.456 0.438-0.476 OR 1.94 1.05-3.58 1.94 1.05-3.58 1.6 0.997-2.57 1.6 0.997-2.57 1.29 0.922-1.8 1.29 0.922-1.8 1.07 0.82-1.39 1.07 0.82-1.39 1 0.833-1.21 1 0.833-1.21 1.12 0.757-1.66 0.567 1.12 0.746-1.67 0.588 1.17 0.783-1.74 0.449 False False False False Both 643 6422 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode202-ukbb-saige-hrc-x202-p-5e-07-mgi-20200608 prsweb-phecode202-ukbb-saige-hrc-x202-p-5e-07-mgi-20200608 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_P_5e-07_MGI_20200608 P_5e-07 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_P_5e-07_MGI_20200608 202 Cancer of other lymphoid, histiocytic tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative Fixed threshold (5e-07) UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 6 0.056 7.28541e-05 0.0827 0.511 0.489-0.537 OR 0.996 0.441-2.25 0.996 0.441-2.25 1.04 0.592-1.84 1.04 0.592-1.84 1.07 0.748-1.54 1.07 0.748-1.54 1.09 0.836-1.41 1.09 0.836-1.41 1.19 0.991-1.42 1.19 0.991-1.42 1.22 0.957-1.55 0.108 1.23 0.968-1.57 0.0901 1.37 1.09-1.74 0.00801 False False False False Both 643 6422 GRCh37/hg19 P<=5e-07 2020-06-08 prsweb-phecode202-c-lymphoma-pt-mgi-20200608 prsweb-phecode202-c-lymphoma-pt-mgi-20200608 PRSWEB_PHECODE202_C-LYMPHOMA_PT_MGI_20200608 P&T PRSWEB_PHECODE202_C-LYMPHOMA_PT_MGI_20200608 202 Lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 14 0.19 0.00170198 0.0827 0.496 0.474-0.52 OR 0.982 0.435-2.22 0.982 0.435-2.22 1.04 0.589-1.83 1.04 0.589-1.83 1.3 0.931-1.82 1.3 0.931-1.82 1.02 0.777-1.33 1.02 0.777-1.33 0.992 0.823-1.2 0.992 0.823-1.2 1.14 0.903-1.44 0.269 1.23 0.978-1.55 0.0773 1.11 0.879-1.41 0.378 False False False False Both 643 6422 GRCh37/hg19 P<=1e-06 2020-06-08 prsweb-phecode202-c-nonfollicular-lymphoma-pt-mgi-20200608 prsweb-phecode202-c-nonfollicular-lymphoma-pt-mgi-20200608 PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_PT_MGI_20200608 P&T PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_PT_MGI_20200608 202 Non-follicular lymphoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 12 0.45 0.00172789 0.0827 0.496 0.472-0.52 OR 1.59 0.824-3.09 1.59 0.824-3.09 1.75 1.11-2.77 1.75 1.11-2.77 1.2 0.853-1.7 1.2 0.853-1.7 0.983 0.749-1.29 0.983 0.749-1.29 1.05 0.87-1.26 1.05 0.87-1.26 0.846 0.669-1.07 0.165 1.06 0.844-1.32 0.637 1.01 0.808-1.27 0.909 False False False False Both 643 6422 GRCh37/hg19 P<=3.16e-06 2020-06-08 prsweb-phecode202-c-tnk-lymphoma-pt-mgi-20200608 prsweb-phecode202-c-tnk-lymphoma-pt-mgi-20200608 PRSWEB_PHECODE202_C-TNK-LYMPHOMA_PT_MGI_20200608 P&T PRSWEB_PHECODE202_C-TNK-LYMPHOMA_PT_MGI_20200608 202 Mature T/NK-cell lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative P&T UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 80 0.91 0.000994522 0.0827 0.498 0.474-0.52 OR 1.13 0.527-2.43 1.13 0.527-2.43 1.59 0.988-2.55 1.59 0.988-2.55 1.23 0.877-1.73 1.23 0.877-1.73 1.15 0.894-1.49 1.15 0.894-1.49 1.04 0.867-1.25 1.04 0.867-1.25 0.859 0.684-1.08 0.195 0.883 0.704-1.11 0.285 0.956 0.765-1.19 0.692 False False False False Both 643 6422 GRCh37/hg19 P<=9.78e-05 2020-06-08 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-pt-mgi-20200608 prsweb-phecode202-gwas-catalog-r2019-05-03-x202-pt-mgi-20200608 PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_PT_MGI_20200608 P&T PRSWEB_PHECODE202_GWAS-Catalog-r2019-05-03-X202_PT_MGI_20200608 202 Marginal zone lymphoma;Waldenström macroglobulinemia / lymphoplasmacytic lymphoma Binary 7 unique SNPs MGI Michigan Genomics Initiative P&T GWAS Catalog (2019-05-03) 25569183;30305637 https://www.ncbi.nlm.nih.gov/pubmed/?term=25569183+30305637 7 0.43 0.000432702 0.0827 0.46 0.441-0.48 OR 1.78 0.943-3.36 1.78 0.943-3.36 1.6 0.997-2.57 1.6 0.997-2.57 1.3 0.93-1.81 1.3 0.93-1.81 1.01 0.775-1.32 1.01 0.775-1.32 1 0.832-1.21 1 0.832-1.21 0.913 0.668-1.25 0.568 0.994 0.73-1.35 0.969 0.971 0.712-1.33 0.855 False False False False Both 643 6422 GRCh37/hg19 P<=3e-06 2020-06-08 prsweb-phecode202-ukbb-saige-hrc-x202-pt-mgi-20200608 prsweb-phecode202-ukbb-saige-hrc-x202-pt-mgi-20200608 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_PT_MGI_20200608 P&T PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_PT_MGI_20200608 202 Cancer of other lymphoid, histiocytic tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative P&T UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 10 0.1 0.000407644 0.0827 0.51 0.487-0.533 OR 1.28 0.623-2.65 1.28 0.623-2.65 1.11 0.641-1.93 1.11 0.641-1.93 1.09 0.766-1.56 1.09 0.766-1.56 0.978 0.746-1.28 0.978 0.746-1.28 0.969 0.803-1.17 0.969 0.803-1.17 1.02 0.797-1.29 0.903 1.47 1.17-1.84 0.000879 1.12 0.885-1.42 0.342 False False False False Both 643 6422 GRCh37/hg19 P<=2e-06 2020-06-08 prsweb-phecode202-c-lymphoma-prs-cs-mgi-20200608 prsweb-phecode202-c-lymphoma-prs-cs-mgi-20200608 PRSWEB_PHECODE202_C-LYMPHOMA_PRS-CS_MGI_20200608 PRS-CS PRSWEB_PHECODE202_C-LYMPHOMA_PRS-CS_MGI_20200608 202 Lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative PRS-CS UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 1109478 0.55 0.000250168 0.0827 0.505 0.482-0.527 OR 1.16 0.539-2.49 1.16 0.539-2.49 1.28 0.762-2.15 1.28 0.762-2.15 1.07 0.749-1.54 1.07 0.749-1.54 1.02 0.779-1.33 1.02 0.779-1.33 1 0.833-1.21 1 0.833-1.21 1.21 0.958-1.52 0.111 1.18 0.932-1.49 0.172 1.14 0.898-1.44 0.289 False False False False Both 643 6422 GRCh37/hg19 auto 2020-06-08 prsweb-phecode202-ukbb-saige-hrc-x202-prs-cs-mgi-20200608 prsweb-phecode202-ukbb-saige-hrc-x202-prs-cs-mgi-20200608 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_PRS-CS_MGI_20200608 PRS-CS PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_PRS-CS_MGI_20200608 202 Cancer of other lymphoid, histiocytic tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative PRS-CS UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 1119238 0.56 0.000140408 0.0827 0.51 0.487-0.531 OR 1.31 0.635-2.7 1.31 0.635-2.7 0.883 0.48-1.62 0.883 0.48-1.62 0.873 0.59-1.29 0.873 0.59-1.29 1.05 0.806-1.37 1.05 0.806-1.37 1.09 0.906-1.31 1.09 0.906-1.31 1.03 0.817-1.3 0.794 1.08 0.859-1.36 0.504 1.13 0.9-1.42 0.292 False False False False Both 643 6422 GRCh37/hg19 auto 2020-06-08 prsweb-phecode202-c-lymphoma-lassosum-mgi-20200608 prsweb-phecode202-c-lymphoma-lassosum-mgi-20200608 PRSWEB_PHECODE202_C-LYMPHOMA_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE202_C-LYMPHOMA_LASSOSUM_MGI_20200608 202 Lymphomas Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative lassosum UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 215 0.43 0.000456261 0.0827 0.478 0.458-0.501 OR 0.993 0.44-2.24 0.993 0.44-2.24 0.882 0.479-1.62 0.882 0.479-1.62 1.11 0.774-1.58 1.11 0.774-1.58 1.14 0.884-1.48 1.14 0.884-1.48 0.998 0.828-1.2 0.998 0.828-1.2 1.17 0.924-1.47 0.196 1.2 0.955-1.52 0.116 1.13 0.891-1.43 0.318 False False False False Both 643 6422 GRCh37/hg19 s=0.2;Lambda=0.04833 2020-06-08 prsweb-phecode202-c-nonfollicular-lymphoma-lassosum-mgi-20200608 prsweb-phecode202-c-nonfollicular-lymphoma-lassosum-mgi-20200608 PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE202_C-NONFOLLICULAR-LYMPHOMA_LASSOSUM_MGI_20200608 202 Non-follicular lymphoma Binary GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018. MGI Michigan Genomics Initiative lassosum UKB GWAS (FINNGEN) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 238 0.33 0.000889991 0.0827 0.495 0.472-0.519 OR 0.989 0.438-2.23 0.989 0.438-2.23 1.19 0.698-2.03 1.19 0.698-2.03 1.3 0.929-1.81 1.3 0.929-1.81 1.23 0.955-1.58 1.23 0.955-1.58 1.06 0.882-1.28 1.06 0.882-1.28 1.09 0.864-1.36 0.478 0.98 0.776-1.24 0.866 1.09 0.864-1.36 0.48 False False False False Both 643 6422 GRCh37/hg19 s=0.9;Lambda=0.07848 2020-06-08 prsweb-phecode202-ukbb-saige-hrc-x202-lassosum-mgi-20200608 prsweb-phecode202-ukbb-saige-hrc-x202-lassosum-mgi-20200608 PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_LASSOSUM_MGI_20200608 Lassosum PRSWEB_PHECODE202_UKBB-SAIGE-HRC-X202_LASSOSUM_MGI_20200608 202 Cancer of other lymphoid, histiocytic tissue Binary ICD9 and ICD10 based PheWAS codes MGI Michigan Genomics Initiative lassosum UKB GWAS (PheCode) UKB_GWAS https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761 39308 0.36 0.000876834 0.0827 0.509 0.484-0.535 OR 2.41 1.37-4.24 2.41 1.37-4.24 1.6 0.996-2.57 1.6 0.996-2.57 1.31 0.935-1.82 1.31 0.935-1.82 1.25 0.972-1.6 1.25 0.972-1.6 1.13 0.943-1.36 1.13 0.943-1.36 0.913 0.723-1.15 0.445 1.01 0.803-1.27 0.937 1.09 0.874-1.37 0.433 False False False False Both 643 6422 GRCh37/hg19 s=0.2;Lambda=0.02336 2020-06-08