prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-05-mgi-20200608	prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-05-mgi-20200608	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-05_MGI_20200608	204.12	Chronic lymphocytic leukemia	Binary	66 unique SNPs	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	GWAS Catalog (2019-05-03)	18758461;21131588;22700719;23770605;24292274;26956414;28165464	https://www.ncbi.nlm.nih.gov/pubmed/?term=18758461+21131588+22700719+23770605+24292274+26956414+28165464	44	6.1e-09	0.0557503	0.0776		0.696	0.621-0.764	OR	12.9	4.45-37.6	12.9	4.45-37.6	8.85	3.66-21.4	8.85	3.66-21.4	6.28	3.27-12.1	6.28	3.27-12.1	4.57	2.61-8	4.57	2.61-8	2.9	1.77-4.75	2.9	1.77-4.75	1.36	0.536-3.43	0.521	2.51	1.09-5.79	0.0307	4.37	1.96-9.71	3e-04	True	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode204-12-ukbb-saige-hrc-x204-12-p-5e-05-mgi-20200608	prsweb-phecode204-12-ukbb-saige-hrc-x204-12-p-5e-05-mgi-20200608	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_P_5e-05_MGI_20200608	204.12	Lymphoid leukemia, chronic	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	125	0.14	7.19398e-05	0.0827		0.546	0.476-0.615	OR	3.51	0.747-16.5	3.51	0.747-16.5	1.75	0.431-7.12	1.75	0.431-7.12	1.92	0.791-4.66	1.92	0.791-4.66	1.59	0.787-3.22	1.59	0.787-3.22	1.43	0.843-2.42	1.43	0.843-2.42	0.984	0.482-2.01	0.964	1.1	0.542-2.22	0.8	1.41	0.72-2.76	0.317	False	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-06-mgi-20200608	prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-06-mgi-20200608	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-06_MGI_20200608	204.12	Chronic lymphocytic leukemia	Binary	66 unique SNPs	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	GWAS Catalog (2019-05-03)	18758461;21131588;22700719;23770605;24292274;26956414;28165464	https://www.ncbi.nlm.nih.gov/pubmed/?term=18758461+21131588+22700719+23770605+24292274+26956414+28165464	43	4.7e-09	0.0544729	0.0775		0.698	0.623-0.766	OR	15.2	5.32-43.4	15.2	5.32-43.4	8.85	3.66-21.4	8.85	3.66-21.4	6.77	3.55-12.9	6.77	3.55-12.9	4.26	2.42-7.48	4.26	2.42-7.48	3.06	1.87-5.03	3.06	1.87-5.03	1.22	0.473-3.14	0.682	2.43	1.05-5.6	0.0376	4.59	2.07-10.2	0.000177	True	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode204-12-ukbb-saige-hrc-x204-12-p-5e-06-mgi-20200608	prsweb-phecode204-12-ukbb-saige-hrc-x204-12-p-5e-06-mgi-20200608	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_P_5e-06_MGI_20200608	204.12	Lymphoid leukemia, chronic	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	24	0.31	0.000154583	0.0828		0.521	0.447-0.598	OR	1.96	0.299-12.8	1.96	0.299-12.8	1.73	0.424-7.09	1.73	0.424-7.09	1.89	0.777-4.57	1.89	0.777-4.57	1.57	0.777-3.18	1.57	0.777-3.18	1.61	0.961-2.7	1.61	0.961-2.7	0.973	0.486-1.95	0.939	0.802	0.381-1.69	0.563	1.42	0.739-2.72	0.294	False	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-07-mgi-20200608	prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-07-mgi-20200608	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-07_MGI_20200608	P_5e-07	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-07_MGI_20200608	204.12	Chronic lymphocytic leukemia	Binary	66 unique SNPs	MGI	Michigan Genomics Initiative	Fixed threshold (5e-07)	GWAS Catalog (2019-05-03)	18758461;21131588;22700719;23770605;24292274;26956414;28165464	https://www.ncbi.nlm.nih.gov/pubmed/?term=18758461+21131588+22700719+23770605+24292274+26956414+28165464	40	7.6e-09	0.055405	0.0778		0.698	0.624-0.768	OR	12.5	4.36-36.1	12.5	4.36-36.1	6.53	2.61-16.3	6.53	2.61-16.3	6.29	3.27-12.1	6.29	3.27-12.1	4.82	2.77-8.39	4.82	2.77-8.39	3.26	1.98-5.35	3.26	1.98-5.35	0.79	0.3-2.08	0.632	2.18	0.977-4.89	0.0571	4.15	1.95-8.86	0.000233	True	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-07					2020-06-08
prsweb-phecode204-12-ukbb-saige-hrc-x204-12-p-5e-07-mgi-20200608	prsweb-phecode204-12-ukbb-saige-hrc-x204-12-p-5e-07-mgi-20200608	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_P_5e-07_MGI_20200608	P_5e-07	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_P_5e-07_MGI_20200608	204.12	Lymphoid leukemia, chronic	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-07)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	6	0.0054	0.0173877	0.0822		0.577	0.511-0.645	OR	2	0.308-13	2	0.308-13	2.47	0.725-8.43	2.47	0.725-8.43	2.53	1.14-5.6	2.53	1.14-5.6	1.57	0.781-3.15	1.57	0.781-3.15	1.23	0.722-2.11	1.23	0.722-2.11	1.7	0.702-4.12	0.239	3.96	1.77-8.86	0.000809	2.84	1.22-6.58	0.015	True	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-07					2020-06-08
prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-09-mgi-20200608	prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-09-mgi-20200608	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-09_MGI_20200608	P_5e-09	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-09_MGI_20200608	204.12	Chronic lymphocytic leukemia	Binary	66 unique SNPs	MGI	Michigan Genomics Initiative	Fixed threshold (5e-09)	GWAS Catalog (2019-05-03)	18758461;21131588;22700719;23770605;24292274;26956414;28165464	https://www.ncbi.nlm.nih.gov/pubmed/?term=18758461+21131588+22700719+23770605+24292274+26956414+28165464	23	5.1e-08	0.0371243	0.0784		0.688	0.618-0.758	OR	11.1	3.68-33.4	11.1	3.68-33.4	6.49	2.58-16.3	6.49	2.58-16.3	6.86	3.58-13.1	6.86	3.58-13.1	4.67	2.66-8.22	4.67	2.66-8.22	2.78	1.69-4.58	2.78	1.69-4.58	1.16	0.454-2.99	0.752	2.87	1.25-6.6	0.0132	4.37	1.96-9.76	0.000316	True	False	False	False	Both	69	687	GRCh37/hg19	P<=5e-09					2020-06-08
prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-08-mgi-20200608	prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-p-5e-08-mgi-20200608	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-08_MGI_20200608	P_5e-08	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-08_MGI_20200608	204.12	Chronic lymphocytic leukemia	Binary	66 unique SNPs	MGI	Michigan Genomics Initiative	GWAS Hits	GWAS Catalog (2019-05-03)	18758461;21131588;22700719;23770605;24292274;26956414;28165464	https://www.ncbi.nlm.nih.gov/pubmed/?term=18758461+21131588+22700719+23770605+24292274+26956414+28165464	32	1.3e-08	0.0457519	0.0779		0.696	0.628-0.765	OR	11.3	3.76-33.9	11.3	3.76-33.9	8.41	3.51-20.1	8.41	3.51-20.1	6.81	3.57-13	6.81	3.57-13	4.45	2.51-7.9	4.45	2.51-7.9	2.9	1.77-4.75	2.9	1.77-4.75	1.28	0.515-3.18	0.594	2.42	1.05-5.61	0.0385	4.3	1.94-9.52	0.00033	True	False	False	True	Both	69	687	GRCh37/hg19	P<=5e-08	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000646/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000646/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-08_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_P_5e-08_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode204-12-20001-1055-pt-mgi-20200608	prsweb-phecode204-12-20001-1055-pt-mgi-20200608	PRSWEB_PHECODE204.12_20001-1055_PT_MGI_20200608	P&T	PRSWEB_PHECODE204.12_20001-1055_PT_MGI_20200608	204.12	Cancer code, self-reported: chronic lymphocytic	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	7	0.22	0.00150579	0.0828		0.522	0.452-0.593	OR	1.93	0.295-12.6	1.93	0.295-12.6	3.24	1.05-10	3.24	1.05-10	1.26	0.457-3.46	1.26	0.457-3.46	1.56	0.779-3.14	1.56	0.779-3.14	1.24	0.725-2.12	1.24	0.725-2.12	1.22	0.605-2.47	0.574	1.22	0.59-2.51	0.595	1.4	0.7-2.79	0.343	False	False	False	False	Both	69	687	GRCh37/hg19	P<=1.58e-06					2020-06-08
prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-pt-mgi-20200608	prsweb-phecode204-12-gwas-catalog-r2019-05-03-x204-12-pt-mgi-20200608	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_PT_MGI_20200608	P&T	PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_PT_MGI_20200608	204.12	Chronic lymphocytic leukemia	Binary	66 unique SNPs	MGI	Michigan Genomics Initiative	P&T	GWAS Catalog (2019-05-03)	18758461;21131588;22700719;23770605;24292274;26956414;28165464	https://www.ncbi.nlm.nih.gov/pubmed/?term=18758461+21131588+22700719+23770605+24292274+26956414+28165464	44	6.1e-09	0.0557503	0.0776		0.696	0.621-0.764	OR	12.9	4.45-37.6	12.9	4.45-37.6	8.85	3.66-21.4	8.85	3.66-21.4	6.28	3.27-12.1	6.28	3.27-12.1	4.57	2.61-8	4.57	2.61-8	2.9	1.77-4.75	2.9	1.77-4.75	1.36	0.536-3.43	0.521	2.51	1.09-5.79	0.0307	4.37	1.96-9.71	3e-04	True	False	False	True	Both	69	687	GRCh37/hg19	P<=7e-06	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000648/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000648/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_PT_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_GWAS-Catalog-r2019-05-03-X204.12_PT_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode204-12-ukbb-saige-hrc-x204-12-pt-mgi-20200608	prsweb-phecode204-12-ukbb-saige-hrc-x204-12-pt-mgi-20200608	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_PT_MGI_20200608	P&T	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_PT_MGI_20200608	204.12	Lymphoid leukemia, chronic	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	6	0.0054	0.0173877	0.0822		0.577	0.511-0.645	OR	2	0.308-13	2	0.308-13	2.47	0.725-8.43	2.47	0.725-8.43	2.53	1.14-5.6	2.53	1.14-5.6	1.57	0.781-3.15	1.57	0.781-3.15	1.23	0.722-2.11	1.23	0.722-2.11	1.7	0.702-4.12	0.239	3.96	1.77-8.86	0.000809	2.84	1.22-6.58	0.015	True	False	False	True	Both	69	687	GRCh37/hg19	P<=3.98e-07	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000650/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000650/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_PT_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_PT_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode204-12-ukbb-saige-hrc-x204-12-prs-cs-mgi-20200608	prsweb-phecode204-12-ukbb-saige-hrc-x204-12-prs-cs-mgi-20200608	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_PRS-CS_MGI_20200608	204.12	Lymphoid leukemia, chronic	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.16	6.53567e-06	0.0826		0.557	0.482-0.634	OR	1.91	0.294-12.5	1.91	0.294-12.5	1	0.178-5.66	1	0.178-5.66	2.18	0.946-5.01	2.18	0.946-5.01	1.93	0.997-3.72	1.93	0.997-3.72	1.73	1.04-2.89	1.73	1.04-2.89	1.05	0.519-2.14	0.884	0.92	0.436-1.94	0.827	1.69	0.873-3.26	0.12	False	False	False	False	Both	69	687	GRCh37/hg19	auto					2020-06-08
prsweb-phecode204-12-20001-1055-lassosum-mgi-20200608	prsweb-phecode204-12-20001-1055-lassosum-mgi-20200608	PRSWEB_PHECODE204.12_20001-1055_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE204.12_20001-1055_LASSOSUM_MGI_20200608	204.12	Cancer code, self-reported: chronic lymphocytic	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	3533	0.88	0.00735335	0.0829		0.498	0.423-0.565	OR	0	0-0	0	0-0	0.334	0.0188-5.93	0.334	0.0188-5.93	1.25	0.454-3.46	1.25	0.454-3.46	1.58	0.784-3.19	1.58	0.784-3.19	1.08	0.619-1.88	1.08	0.619-1.88	1.12	0.575-2.17	0.742	0.929	0.46-1.88	0.837	1.09	0.552-2.17	0.796	False	False	False	False	Both	69	687	GRCh37/hg19	s=0.5;Lambda=0.1					2020-06-08
prsweb-phecode204-12-ukbb-saige-hrc-x204-12-lassosum-mgi-20200608	prsweb-phecode204-12-ukbb-saige-hrc-x204-12-lassosum-mgi-20200608	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_LASSOSUM_MGI_20200608	204.12	Lymphoid leukemia, chronic	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	76	0.022	0.00431619	0.0823		0.573	0.503-0.644	OR	4.84	1.23-19	4.84	1.23-19	2.47	0.722-8.45	2.47	0.722-8.45	2.23	0.963-5.16	2.23	0.963-5.16	2.15	1.12-4.1	2.15	1.12-4.1	1.24	0.723-2.13	1.24	0.723-2.13	1.06	0.477-2.34	0.893	2.33	1.13-4.78	0.0217	1.7	0.807-3.57	0.163	True	False	False	True	Both	69	687	GRCh37/hg19	s=0.5;Lambda=0.1	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000651/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000651/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_LASSOSUM_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.12_UKBB-SAIGE-HRC-X204.12_LASSOSUM_MGI_20200608/exclusion.tsv	2020-06-08