prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode204-1-c91-p-5e-05-mgi-20200608	prsweb-phecode204-1-c91-p-5e-05-mgi-20200608	PRSWEB_PHECODE204.1_C91_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE204.1_C91_P_5e-05_MGI_20200608	204.1	Diagnoses - main ICD10: C91 Lymphoid leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	91	0.82	8.98411e-07	0.0826		0.495	0.434-0.552	OR	2.64	0.604-11.5	2.64	0.604-11.5	3.66	1.43-9.42	3.66	1.43-9.42	1.73	0.765-3.9	1.73	0.765-3.9	1.21	0.61-2.4	1.21	0.61-2.4	0.903	0.539-1.51	0.903	0.539-1.51	1.1	0.604-2.02	0.747	1.11	0.605-2.03	0.738	0.882	0.472-1.65	0.695	False	False	False	False	Both	87	870	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode204-1-ukbb-saige-hrc-x204-1-p-5e-05-mgi-20200608	prsweb-phecode204-1-ukbb-saige-hrc-x204-1-p-5e-05-mgi-20200608	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_P_5e-05_MGI_20200608	204.1	Lymphoid leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	113	0.37	0.0050686	0.0825		0.523	0.452-0.591	OR	5.09	1.53-16.9	5.09	1.53-16.9	3.15	1.15-8.59	3.15	1.15-8.59	1.52	0.642-3.58	1.52	0.642-3.58	1.22	0.622-2.41	1.22	0.622-2.41	1.44	0.901-2.3	1.44	0.901-2.3	0.768	0.41-1.44	0.408	0.821	0.438-1.54	0.54	1.2	0.675-2.12	0.539	False	False	False	False	Both	87	870	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode204-1-c-lymphoid-leukaemia-p-5e-06-mgi-20200608	prsweb-phecode204-1-c-lymphoid-leukaemia-p-5e-06-mgi-20200608	PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_P_5e-06_MGI_20200608	204.1	Lymphoid leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (FINNGEN)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	20	0.61	0.00369312	0.0826		0.511	0.45-0.58	OR	0	0-0	0	0-0	0.803	0.147-4.39	0.803	0.147-4.39	1	0.371-2.72	1	0.371-2.72	1.21	0.61-2.38	1.21	0.61-2.38	0.85	0.505-1.43	0.85	0.505-1.43	0.689	0.352-1.35	0.277	1.52	0.861-2.7	0.148	0.907	0.483-1.7	0.762	False	False	False	False	Both	87	870	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode204-1-c91-p-5e-06-mgi-20200608	prsweb-phecode204-1-c91-p-5e-06-mgi-20200608	PRSWEB_PHECODE204.1_C91_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE204.1_C91_P_5e-06_MGI_20200608	204.1	Diagnoses - main ICD10: C91 Lymphoid leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	21	0.31	0.000109791	0.0825		0.521	0.453-0.588	OR	1.51	0.247-9.27	1.51	0.247-9.27	1.9	0.581-6.23	1.9	0.581-6.23	1.73	0.768-3.89	1.73	0.768-3.89	1.35	0.7-2.61	1.35	0.7-2.61	1.21	0.749-1.97	1.21	0.749-1.97	0.735	0.372-1.45	0.375	1.19	0.653-2.17	0.568	1.23	0.674-2.25	0.497	False	False	False	False	Both	87	870	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode204-1-ukbb-saige-hrc-x204-1-p-5e-06-mgi-20200608	prsweb-phecode204-1-ukbb-saige-hrc-x204-1-p-5e-06-mgi-20200608	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_P_5e-06_MGI_20200608	204.1	Lymphoid leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	25	0.13	0.00793421	0.0824		0.528	0.463-0.593	OR	1.59	0.259-9.81	1.59	0.259-9.81	2.54	0.862-7.48	2.54	0.862-7.48	1.24	0.497-3.1	1.24	0.497-3.1	1.35	0.699-2.6	1.35	0.699-2.6	1.28	0.797-2.07	1.28	0.797-2.07	0.743	0.387-1.43	0.371	1.03	0.567-1.88	0.921	1.16	0.647-2.07	0.621	False	False	False	False	Both	87	870	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode204-1-ukbb-saige-hrc-x204-1-p-5e-07-mgi-20200608	prsweb-phecode204-1-ukbb-saige-hrc-x204-1-p-5e-07-mgi-20200608	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_P_5e-07_MGI_20200608	P_5e-07	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_P_5e-07_MGI_20200608	204.1	Lymphoid leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-07)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	5	0.028	0.0152043	0.0823		0.557	0.506-0.614	OR	0	0-0	0	0-0	1.93	0.591-6.34	1.93	0.591-6.34	1.51	0.641-3.56	1.51	0.641-3.56	1.24	0.625-2.44	1.24	0.625-2.44	1.36	0.846-2.17	1.36	0.846-2.17	2.22	1.1-4.48	0.0257	1.99	0.98-4.04	0.057	2.32	1.16-4.64	0.0178	True	False	False	False	Both	87	870	GRCh37/hg19	P<=5e-07					2020-06-08
prsweb-phecode204-1-c-lymphoid-leukaemia-pt-mgi-20200608	prsweb-phecode204-1-c-lymphoid-leukaemia-pt-mgi-20200608	PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_PT_MGI_20200608	P&T	PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_PT_MGI_20200608	204.1	Lymphoid leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (FINNGEN)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	6	0.0026	0.0154783	0.0819		0.578	0.517-0.642	OR	3.69	1.01-13.4	3.69	1.01-13.4	2.53	0.864-7.44	2.53	0.864-7.44	1.99	0.919-4.31	1.99	0.919-4.31	1.78	0.968-3.27	1.78	0.968-3.27	1.66	1.05-2.63	1.66	1.05-2.63	1.55	0.773-3.11	0.216	1.75	0.885-3.47	0.108	2.38	1.24-4.57	0.00934	True	False	False	True	Both	87	870	GRCh37/hg19	P<=1e-06	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000645/ScoringFiles/	https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS000645/ScoringFiles/	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_PT_MGI_20200608/all.tsv	/larsf/prsweb-data/cancerprsweb/releases/cancerprsweb_20200608/phewas/PRSWEB_PHECODE204.1_C-LYMPHOID-LEUKAEMIA_PT_MGI_20200608/exclusion.tsv	2020-06-08
prsweb-phecode204-1-c91-pt-mgi-20200608	prsweb-phecode204-1-c91-pt-mgi-20200608	PRSWEB_PHECODE204.1_C91_PT_MGI_20200608	P&T	PRSWEB_PHECODE204.1_C91_PT_MGI_20200608	204.1	Diagnoses - main ICD10: C91 Lymphoid leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	6	0.18	0.00100075	0.0825		0.512	0.448-0.573	OR	1.57	0.256-9.68	1.57	0.256-9.68	1.36	0.347-5.35	1.36	0.347-5.35	1.77	0.783-4	1.77	0.783-4	1.66	0.889-3.08	1.66	0.889-3.08	1.03	0.625-1.7	1.03	0.625-1.7	1.98	1.03-3.81	0.0409	1.64	0.849-3.18	0.14	1.5	0.766-2.93	0.237	False	False	False	False	Both	87	870	GRCh37/hg19	P<=1.26e-06					2020-06-08
prsweb-phecode204-1-ukbb-saige-hrc-x204-1-pt-mgi-20200608	prsweb-phecode204-1-ukbb-saige-hrc-x204-1-pt-mgi-20200608	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_PT_MGI_20200608	P&T	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_PT_MGI_20200608	204.1	Lymphoid leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	10	0.45	0.0177568	0.0826		0.498	0.442-0.561	OR	1.57	0.256-9.66	1.57	0.256-9.66	1.87	0.573-6.12	1.87	0.573-6.12	1.24	0.497-3.1	1.24	0.497-3.1	0.958	0.458-2	0.958	0.458-2	0.799	0.471-1.36	0.799	0.471-1.36	1.4	0.742-2.64	0.299	1.6	0.863-2.95	0.136	1.06	0.547-2.05	0.868	False	False	False	False	Both	87	870	GRCh37/hg19	P<=1.58e-06					2020-06-08
prsweb-phecode204-1-ukbb-saige-hrc-x204-1-prs-cs-mgi-20200608	prsweb-phecode204-1-ukbb-saige-hrc-x204-1-prs-cs-mgi-20200608	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_PRS-CS_MGI_20200608	204.1	Lymphoid leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.16	0.000591521	0.0824		0.532	0.466-0.601	OR	3.82	1.02-14.3	3.82	1.02-14.3	1.91	0.578-6.33	1.91	0.578-6.33	2.25	1.07-4.74	2.25	1.07-4.74	1.63	0.873-3.03	1.63	0.873-3.03	1.28	0.795-2.06	1.28	0.795-2.06	1.21	0.643-2.29	0.549	1.18	0.619-2.23	0.62	1.44	0.775-2.66	0.25	False	False	False	False	Both	87	870	GRCh37/hg19	auto					2020-06-08
prsweb-phecode204-1-c91-lassosum-mgi-20200608	prsweb-phecode204-1-c91-lassosum-mgi-20200608	PRSWEB_PHECODE204.1_C91_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE204.1_C91_LASSOSUM_MGI_20200608	204.1	Diagnoses - main ICD10: C91 Lymphoid leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (ICD10)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	11436	0.88	0.00462042	0.0826		0.504	0.445-0.565	OR	1.58	0.259-9.59	1.58	0.259-9.59	0.795	0.145-4.37	0.795	0.145-4.37	1.24	0.497-3.11	1.24	0.497-3.11	0.956	0.457-2	0.956	0.457-2	0.847	0.504-1.43	0.847	0.504-1.43	1.09	0.578-2.05	0.792	1.41	0.778-2.56	0.256	0.985	0.518-1.87	0.964	False	False	False	False	Both	87	870	GRCh37/hg19	s=0.9;Lambda=0.07848					2020-06-08
prsweb-phecode204-1-ukbb-saige-hrc-x204-1-lassosum-mgi-20200608	prsweb-phecode204-1-ukbb-saige-hrc-x204-1-lassosum-mgi-20200608	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE204.1_UKBB-SAIGE-HRC-X204.1_LASSOSUM_MGI_20200608	204.1	Lymphoid leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	14079	0.81	0.0118882	0.0826		0.502	0.432-0.566	OR	2.68	0.615-11.7	2.68	0.615-11.7	1.94	0.592-6.37	1.94	0.592-6.37	2.01	0.926-4.37	2.01	0.926-4.37	1.22	0.617-2.41	1.22	0.617-2.41	1.35	0.843-2.17	1.35	0.843-2.17	0.605	0.323-1.14	0.118	0.621	0.335-1.15	0.131	0.97	0.556-1.69	0.914	False	False	False	False	Both	87	870	GRCh37/hg19	s=0.9;Lambda=0.06158					2020-06-08