prs_id	slug	legacy_id	legacy_model	prswebprefix	trait_code	trait_name	trait_type	description	cohort	cohort_label	method	gwas_source	reference_label	reference_url	snp_count	p_value	pseudo_r2	brier_score	mse	aauc	aauc_ci	effect_metric	top_effect_1	top_effect_1_ci	top_or_1	top_or_1_ci	top_effect_2	top_effect_2_ci	top_or_2	top_or_2_ci	top_effect_5	top_effect_5_ci	top_or_5	top_or_5_ci	top_effect_10	top_effect_10_ci	top_or_10	top_or_10_ci	top_effect_25	top_effect_25_ci	top_or_25	top_or_25_ci	q1_vs_q2_effect	q1_vs_q2_effect_ci	q1_vs_q2_p_value	q1_vs_q3_effect	q1_vs_q3_effect_ci	q1_vs_q3_p_value	q1_vs_q4_effect	q1_vs_q4_effect_ci	q1_vs_q4_p_value	nominally_significant	reversed_effect_warning	underpowered_warning	upload_to_portal	sex	cases	controls	genome_build	tuning_parameter	weights_external_url	weights_url	phewas_download_url	exclusion_download_url	last_updated
prsweb-phecode204-ukbb-saige-hrc-x204-p-5e-05-mgi-20200608	prsweb-phecode204-ukbb-saige-hrc-x204-p-5e-05-mgi-20200608	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_P_5e-05_MGI_20200608	P_5e-05	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_P_5e-05_MGI_20200608	204	Leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-05)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	129	0.096	0.00066718	0.0825		0.528	0.492-0.566	OR	1.23	0.397-3.82	1.23	0.397-3.82	1.32	0.608-2.87	1.32	0.608-2.87	1.19	0.705-2.02	1.19	0.705-2.02	1.27	0.873-1.86	1.27	0.873-1.86	1.22	0.929-1.6	1.22	0.929-1.6	0.917	0.635-1.32	0.644	1.16	0.817-1.64	0.412	1.26	0.892-1.77	0.19	False	False	False	False	Both	277	2770	GRCh37/hg19	P<=5e-05					2020-06-08
prsweb-phecode204-ukbb-saige-hrc-x204-p-5e-06-mgi-20200608	prsweb-phecode204-ukbb-saige-hrc-x204-p-5e-06-mgi-20200608	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_P_5e-06_MGI_20200608	P_5e-06	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_P_5e-06_MGI_20200608	204	Leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	Fixed threshold (5e-06)	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	14	0.67	0.000712274	0.0826		0.503	0.47-0.538	OR	0.531	0.1-2.81	0.531	0.1-2.81	0.441	0.123-1.58	0.441	0.123-1.58	0.596	0.295-1.2	0.596	0.295-1.2	0.991	0.656-1.5	0.991	0.656-1.5	0.948	0.711-1.26	0.948	0.711-1.26	1.29	0.897-1.86	0.169	1.53	1.08-2.18	0.017	1.21	0.831-1.75	0.324	False	False	False	False	Both	277	2770	GRCh37/hg19	P<=5e-06					2020-06-08
prsweb-phecode204-ukbb-saige-hrc-x204-pt-mgi-20200608	prsweb-phecode204-ukbb-saige-hrc-x204-pt-mgi-20200608	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_PT_MGI_20200608	P&T	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_PT_MGI_20200608	204	Leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	P&T	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	11	0.23	0.00160209	0.0826		0.515	0.483-0.549	OR	0	0-0	0	0-0	0.261	0.051-1.33	0.261	0.051-1.33	1.04	0.598-1.82	1.04	0.598-1.82	0.997	0.66-1.51	0.997	0.66-1.51	1.12	0.852-1.48	1.12	0.852-1.48	1.11	0.777-1.6	0.556	1.25	0.881-1.78	0.211	1.24	0.873-1.77	0.227	False	False	False	False	Both	277	2770	GRCh37/hg19	P<=3.16e-06					2020-06-08
prsweb-phecode204-20001-1048-prs-cs-mgi-20200608	prsweb-phecode204-20001-1048-prs-cs-mgi-20200608	PRSWEB_PHECODE204_20001-1048_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE204_20001-1048_PRS-CS_MGI_20200608	204	Cancer code, self-reported: leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	943472	0.9	0.00145612	0.0826		0.501	0.467-0.537	OR	0.876	0.235-3.26	0.876	0.235-3.26	2.07	1.08-3.97	2.07	1.08-3.97	1.19	0.704-2.01	1.19	0.704-2.01	1.11	0.745-1.64	1.11	0.745-1.64	1.02	0.766-1.35	1.02	0.766-1.35	1.2	0.85-1.69	0.3	0.999	0.699-1.43	0.997	1.08	0.762-1.54	0.66	False	False	False	False	Both	277	2770	GRCh37/hg19	auto					2020-06-08
prsweb-phecode204-ukbb-saige-hrc-x204-prs-cs-mgi-20200608	prsweb-phecode204-ukbb-saige-hrc-x204-prs-cs-mgi-20200608	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_PRS-CS_MGI_20200608	PRS-CS	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_PRS-CS_MGI_20200608	204	Leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	PRS-CS	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	1119238	0.068	0.00123352	0.0825		0.532	0.494-0.567	OR	2.02	0.793-5.15	2.02	0.793-5.15	1.75	0.864-3.53	1.75	0.864-3.53	1.9	1.22-2.96	1.9	1.22-2.96	1.85	1.32-2.59	1.85	1.32-2.59	1.22	0.927-1.6	1.22	0.927-1.6	0.851	0.592-1.22	0.383	1.04	0.739-1.48	0.805	1.15	0.818-1.61	0.427	False	False	False	False	Both	277	2770	GRCh37/hg19	auto					2020-06-08
prsweb-phecode204-20001-1048-lassosum-mgi-20200608	prsweb-phecode204-20001-1048-lassosum-mgi-20200608	PRSWEB_PHECODE204_20001-1048_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE204_20001-1048_LASSOSUM_MGI_20200608	204	Cancer code, self-reported: leukaemia	Binary	GWAS round 2: Results shared 1st August 2018. Imputed genotypes from HRC plus UK10K & 1000 Genomes reference panels as released by UK Biobank in March 2018.	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PHESANT)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	349179	0.92	0.00137955	0.0826		0.505	0.469-0.541	OR	1.25	0.401-3.86	1.25	0.401-3.86	1.17	0.511-2.66	1.17	0.511-2.66	1.19	0.703-2.01	1.19	0.703-2.01	1.11	0.745-1.64	1.11	0.745-1.64	0.962	0.723-1.28	0.962	0.723-1.28	0.943	0.665-1.34	0.743	1.05	0.748-1.48	0.77	0.964	0.68-1.36	0.835	False	False	False	False	Both	277	2770	GRCh37/hg19	s=0.9;Lambda=0.04833					2020-06-08
prsweb-phecode204-ukbb-saige-hrc-x204-lassosum-mgi-20200608	prsweb-phecode204-ukbb-saige-hrc-x204-lassosum-mgi-20200608	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_LASSOSUM_MGI_20200608	Lassosum	PRSWEB_PHECODE204_UKBB-SAIGE-HRC-X204_LASSOSUM_MGI_20200608	204	Leukemia	Binary	ICD9 and ICD10 based PheWAS codes	MGI	Michigan Genomics Initiative	lassosum	UKB GWAS (PheCode)	UKB_GWAS	https://www.ncbi.nlm.nih.gov/pubmed/?term=30104761	35027	0.095	0.00268568	0.0825		0.523	0.49-0.558	OR	2.3	0.959-5.51	2.3	0.959-5.51	2.84	1.59-5.07	2.84	1.59-5.07	1.91	1.23-2.97	1.91	1.23-2.97	1.64	1.15-2.32	1.64	1.15-2.32	1.07	0.804-1.41	1.07	0.804-1.41	1.1	0.767-1.57	0.61	1.25	0.884-1.78	0.204	1.22	0.857-1.75	0.266	False	False	False	False	Both	277	2770	GRCh37/hg19	s=0.5;Lambda=0.02976					2020-06-08