prs_id slug legacy_id legacy_model prswebprefix trait_code trait_name trait_type description cohort cohort_label method gwas_source reference_label reference_url snp_count p_value pseudo_r2 brier_score aauc aauc_ci effect_metric top_effect_1 top_effect_1_ci top_or_1 top_or_1_ci top_effect_2 top_effect_2_ci top_or_2 top_or_2_ci top_effect_5 top_effect_5_ci top_or_5 top_or_5_ci top_effect_10 top_effect_10_ci top_or_10 top_or_10_ci top_effect_25 top_effect_25_ci top_or_25 top_or_25_ci q1_vs_q2_effect q1_vs_q2_effect_ci q1_vs_q2_p_value q1_vs_q3_effect q1_vs_q3_effect_ci q1_vs_q3_p_value q1_vs_q4_effect q1_vs_q4_effect_ci q1_vs_q4_p_value nominally_significant reversed_effect_warning underpowered_warning upload_to_portal sex cases controls genome_build tuning_parameter weights_external_url weights_relpath phewas_relpath exclusion_relpath last_updated mse exclusion_criteria_type exclusion_range_low exclusion_range_high exclusion_range_unit exclusion_note exprsweb-vitamin-b12-100013-irnt-pt-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-B12_100013-irnt_PT_MGI-Freeze3_20211120 100013-irnt Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 40176 0.82 0.00165437324626577 Beta 0.171 -0.04068-0.38268 0.171 -0.04068-0.38268 0.22 0.069472-0.370528 0.22 0.069472-0.370528 0.121 0.024176-0.217824 0.121 0.024176-0.217824 0.0931 0.022736-0.163464 0.0931 0.022736-0.163464 0.057 0.008196-0.105804 0.057 0.008196-0.105804 0.0198 -0.040372-0.079972 0.519 -0.00627 -0.065462-0.052922 0.835 0.0663 0.00554-0.12706 0.0327 FALSE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 3.98e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003155/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64358.4861395092 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-irnt-plink-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-B12_100013-irnt_PLINK_MGI-Freeze3_20211120 100013-irnt Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 88908 0.26 0.000988556297279602 Beta 0.0983 -0.11338-0.30998 0.0983 -0.11338-0.30998 0.0737 -0.076828-0.224228 0.0737 -0.076828-0.224228 0.138 0.041372-0.234628 0.138 0.041372-0.234628 0.0805 0.010136-0.150864 0.0805 0.010136-0.150864 0.0132 -0.035604-0.062004 0.0132 -0.035604-0.062004 0.019 -0.040584-0.078584 0.532 0.059 -0.000192-0.118192 0.0504 0.0399 -0.01988-0.09968 0.192 FALSE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 2.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003156/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64340.0103115992 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-B12_100013-irnt_DBSLMM_MGI-Freeze3_20211120 100013-irnt Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10318270 0.59 5.1942596861783e-05 Beta 0.151 -0.06068-0.36268 0.151 -0.06068-0.36268 0.109 -0.041528-0.259528 0.109 -0.041528-0.259528 -0.0344 -0.131224-0.062424 -0.0344 -0.131224-0.062424 0.0089 -0.061464-0.079264 0.0089 -0.061464-0.079264 0.00516 -0.043644-0.053964 0.00516 -0.043644-0.053964 -0.0248 -0.084188-0.034588 0.413 -0.00376 -0.06452-0.057 0.903 -0.00357 -0.063546-0.056406 0.907 FALSE TRUE FALSE TRUE Both 4313 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003157/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64354.8707179311 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-irnt-prscs-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-B12_100013-irnt_PRSCS_MGI-Freeze3_20211120 100013-irnt Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113819 0.91 0.000682380613196766 Beta 0.015 -0.19668-0.22668 0.015 -0.19668-0.22668 7.45e-05 -0.1504535-0.1506025 7.45e-05 -0.1504535-0.1506025 0.0587 -0.038124-0.155524 0.0587 -0.038124-0.155524 0.0881 0.017736-0.158464 0.0881 0.017736-0.158464 0.0292 -0.019604-0.078004 0.0292 -0.019604-0.078004 0.0108 -0.049764-0.071364 0.725 0.0051 -0.054288-0.064488 0.866 0.0369 -0.022684-0.096484 0.226 FALSE TRUE FALSE TRUE Both 4313 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003158/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64359.0469716088 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-irnt-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-B12_100013-irnt_LASSOSUM_MGI-Freeze3_20211120 100013-irnt Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 314838 0.93 0.00074682192747882 Beta 0.104 -0.10768-0.31568 0.104 -0.10768-0.31568 0.116 -0.034528-0.266528 0.116 -0.034528-0.266528 0.0373 -0.059524-0.134124 0.0373 -0.059524-0.134124 0.0404 -0.029964-0.110764 0.0404 -0.029964-0.110764 0.0171 -0.031704-0.065904 0.0171 -0.031704-0.065904 0.000714 -0.060242-0.06167 0.982 0.0179 -0.041684-0.077484 0.555 0.0239 -0.035292-0.083092 0.429 FALSE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 s=1;Lambda=0.00695 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003154/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64359.0983419893 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-raw-pt-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-raw-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-B12_100013-raw_PT_MGI-Freeze3_20211120 100013-raw Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 83714 0.85 0.00112759142898374 Beta 0.0457 -0.16598-0.25738 0.0457 -0.16598-0.25738 0.0428 -0.107728-0.193328 0.0428 -0.107728-0.193328 0.02 -0.076824-0.116824 0.02 -0.076824-0.116824 0.0421 -0.02846-0.11266 0.0421 -0.02846-0.11266 0.00122 -0.04778-0.05022 0.00122 -0.04778-0.05022 0.0407 -0.019472-0.100872 0.185 0.0473 -0.01248-0.10708 0.121 0.0323 -0.028264-0.092864 0.297 FALSE TRUE FALSE TRUE Both 4313 0 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003160/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64358.7080952652 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-raw-plink-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-raw-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-B12_100013-raw_PLINK_MGI-Freeze3_20211120 100013-raw Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 190297 0.35 0.000954225467799252 Beta 0.0235 -0.18818-0.23518 0.0235 -0.18818-0.23518 -0.0549 -0.205428-0.095628 -0.0549 -0.205428-0.095628 -0.0934 -0.190224-0.003424 -0.0934 -0.190224-0.003424 -0.0835 -0.153864--0.013136 -0.0835 -0.153864--0.013136 -0.0517 -0.100504--0.002896 -0.0517 -0.100504--0.002896 -0.04 -0.099976-0.019976 0.19 -0.0139 -0.074072-0.046272 0.65 -0.0698 -0.12958--0.01002 0.0222 FALSE TRUE FALSE TRUE Both 4313 0 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003161/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64346.136529773 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-raw-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-B12_100013-raw_DBSLMM_MGI-Freeze3_20211120 100013-raw Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10318272 0.64 3.52051942703011e-06 Beta -0.0865 -0.29818-0.12518 -0.0865 -0.29818-0.12518 -0.0628 -0.213328-0.087728 -0.0628 -0.213328-0.087728 -0.0667 -0.163524-0.030124 -0.0667 -0.163524-0.030124 0.0106 -0.059764-0.080964 0.0106 -0.059764-0.080964 -0.00253 -0.051334-0.046274 -0.00253 -0.051334-0.046274 0.0138 -0.045784-0.073384 0.65 0.0276 -0.032572-0.087772 0.368 0.0105 -0.04928-0.07028 0.73 FALSE TRUE FALSE TRUE Both 4313 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003162/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64356.0277832554 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-raw-prscs-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-B12_100013-raw_PRSCS_MGI-Freeze3_20211120 100013-raw Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113819 0.61 0.000785804900017698 Beta 0.102 -0.10968-0.31368 0.102 -0.10968-0.31368 0.147 -0.003528-0.297528 0.147 -0.003528-0.297528 0.12 0.023176-0.216824 0.12 0.023176-0.216824 0.0543 -0.016064-0.124664 0.0543 -0.016064-0.124664 0.0226 -0.026204-0.071404 0.0226 -0.026204-0.071404 -0.0237 -0.083088-0.035688 0.433 0.0125 -0.047084-0.072084 0.68 0.0206 -0.039768-0.080968 0.503 FALSE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003163/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64355.3581922701 normal_range 200 900 pg/ml exprsweb-vitamin-b12-100013-raw-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-b12-100013-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_100013-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-B12_100013-raw_LASSOSUM_MGI-Freeze3_20211120 100013-raw Vitamin B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 313902 0.74 0.00149595455500196 Beta 0.16 -0.05168-0.37168 0.16 -0.05168-0.37168 0.108 -0.042528-0.258528 0.108 -0.042528-0.258528 0.085 -0.011824-0.181824 0.085 -0.011824-0.181824 0.0665 -0.003864-0.136864 0.0665 -0.003864-0.136864 0.036 -0.012804-0.084804 0.036 -0.012804-0.084804 0.00536 -0.053832-0.064552 0.859 0.0271 -0.032288-0.086488 0.372 0.0459 -0.014664-0.106464 0.138 FALSE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 s=0.5;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003159/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_100013-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_100013-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64357.5472473366 normal_range 200 900 pg/ml exprsweb-vitamin-d-100021-irnt-pt-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-D_100021-irnt_PT_MGI-Freeze3_20211120 100021-irnt Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 11 0.13 0.000298865366553259 Beta -0.105 -0.268268-0.058268 -0.105 -0.268268-0.058268 -0.0108 -0.126832-0.105232 -0.0108 -0.126832-0.105232 -0.0234 -0.098076-0.051276 -0.0234 -0.098076-0.051276 -0.000578 -0.05487-0.053714 -0.000578 -0.05487-0.053714 -0.00428 -0.041912-0.033352 -0.00428 -0.041912-0.033352 -0.0364 -0.082656-0.009856 0.123 0.00454 -0.041716-0.050796 0.847 -0.0155 -0.061756-0.030756 0.513 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003175/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1034250103281 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-irnt-plink-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-D_100021-irnt_PLINK_MGI-Freeze3_20211120 100021-irnt Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 19 0.14 0.000183151187416066 Beta 0.0592 -0.104068-0.222468 0.0592 -0.104068-0.222468 0.00617 -0.109862-0.122202 0.00617 -0.109862-0.122202 0.0223 -0.052376-0.096976 0.0223 -0.052376-0.096976 -0.0022 -0.056492-0.052092 -0.0022 -0.056492-0.052092 0.00633 -0.031302-0.043962 0.00633 -0.031302-0.043962 0.00613 -0.040322-0.052582 0.796 -0.00218 -0.048044-0.043684 0.926 0.00876 -0.037692-0.055212 0.712 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 2.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003176/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1040095528631 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-D_100021-irnt_DBSLMM_MGI-Freeze3_20211120 100021-irnt Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10318270 0.25 1.54453461696381e-05 Beta 0.0889 -0.074368-0.252168 0.0889 -0.074368-0.252168 0.0525 -0.063532-0.168532 0.0525 -0.063532-0.168532 0.0103 -0.064376-0.084976 0.0103 -0.064376-0.084976 0.0322 -0.022092-0.086492 0.0322 -0.022092-0.086492 -0.00156 -0.039192-0.036072 -0.00156 -0.039192-0.036072 0.0104 -0.035856-0.056656 0.66 0.0269 -0.018964-0.072764 0.25 0.0104 -0.036052-0.056852 0.66 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003177/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1142870750872 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-irnt-prscs-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-D_100021-irnt_PRSCS_MGI-Freeze3_20211120 100021-irnt Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113819 0.3 1.2980776490793e-08 Beta -0.0891 -0.252172-0.073972 -0.0891 -0.252172-0.073972 -0.0498 -0.165832-0.066232 -0.0498 -0.165832-0.066232 0.055 -0.019676-0.129676 0.055 -0.019676-0.129676 0.0213 -0.032992-0.075592 0.0213 -0.032992-0.075592 0.021 -0.016632-0.058632 0.021 -0.016632-0.058632 0.00196 -0.044296-0.048216 0.934 -0.00139 -0.047646-0.044866 0.953 0.0211 -0.024568-0.066768 0.366 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003178/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1173286661257 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-irnt-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-D_100021-irnt_LASSOSUM_MGI-Freeze3_20211120 100021-irnt Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 312224 0.5 0.00049750412450984 Beta -0.0458 -0.209068-0.117468 -0.0458 -0.209068-0.117468 -0.0379 -0.153932-0.078132 -0.0379 -0.153932-0.078132 -0.000401 -0.075077-0.074275 -0.000401 -0.075077-0.074275 0.00645 -0.047842-0.060742 0.00645 -0.047842-0.060742 -0.0311 -0.068732-0.006532 -0.0311 -0.068732-0.006532 -0.0221 -0.06816-0.02396 0.345 0.0144 -0.032052-0.060852 0.544 -0.0335 -0.079168-0.012168 0.15 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 s=0.9;Lambda=0.01129 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003174/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1246737912372 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-raw-pt-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-raw-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-D_100021-raw_PT_MGI-Freeze3_20211120 100021-raw Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 5 0.14 0.000395686444911916 Beta 0.109 -0.054268-0.272268 0.109 -0.054268-0.272268 0.12 0.003968-0.236032 0.12 0.003968-0.236032 0.064 -0.010676-0.138676 0.064 -0.010676-0.138676 0.0659 0.011608-0.120192 0.0659 0.011608-0.120192 0.0266 -0.011032-0.064232 0.0266 -0.011032-0.064232 -0.0153 -0.06136-0.03076 0.515 0.028 -0.017668-0.073668 0.23 0.0306 -0.01546-0.07666 0.193 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 1.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003180/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.10518220113 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-raw-plink-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-raw-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-D_100021-raw_PLINK_MGI-Freeze3_20211120 100021-raw Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 15 0.4 0.000686260530694041 Beta 0.0645 -0.098768-0.227768 0.0645 -0.098768-0.227768 -0.00236 -0.118392-0.113672 -0.00236 -0.118392-0.113672 0.00121 -0.073466-0.075886 0.00121 -0.073466-0.075886 -0.0258 -0.080092-0.028492 -0.0258 -0.080092-0.028492 0.00734 -0.030292-0.044972 0.00734 -0.030292-0.044972 0.0197 -0.02636-0.06576 0.402 0.0281 -0.018156-0.074356 0.234 0.0236 -0.021872-0.069072 0.311 FALSE TRUE FALSE TRUE Both 6926 0 GRCh37/hg19 1.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003181/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1219307611504 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-raw-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-D_100021-raw_DBSLMM_MGI-Freeze3_20211120 100021-raw Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10318270 0.92 0.000316595307650835 Beta -0.00662 -0.169888-0.156648 -0.00662 -0.169888-0.156648 -0.00568 -0.121712-0.110352 -0.00568 -0.121712-0.110352 0.0053 -0.069376-0.079976 0.0053 -0.069376-0.079976 0.026 -0.028292-0.080292 0.026 -0.028292-0.080292 0.0259 -0.011732-0.063532 0.0259 -0.011732-0.063532 -0.0138 -0.060252-0.032652 0.561 0.00189 -0.043974-0.047754 0.936 0.0219 -0.023964-0.067764 0.351 FALSE TRUE FALSE TRUE Both 6926 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003182/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1300134874101 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-raw-prscs-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-D_100021-raw_PRSCS_MGI-Freeze3_20211120 100021-raw Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113819 0.25 2.43471798976455e-06 Beta -0.0485 -0.211768-0.114768 -0.0485 -0.211768-0.114768 -0.0465 -0.162532-0.069532 -0.0465 -0.162532-0.069532 -0.0131 -0.087776-0.061576 -0.0131 -0.087776-0.061576 0.0063 -0.047992-0.060592 0.0063 -0.047992-0.060592 0.0319 -0.005732-0.069532 0.0319 -0.005732-0.069532 -0.00484 -0.051292-0.041612 0.838 0.0139 -0.031768-0.059568 0.553 0.0358 -0.009868-0.081468 0.124 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003183/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1148982540793 normal_range 20 50 ng/ml exprsweb-vitamin-d-100021-raw-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-d-100021-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_100021-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-D_100021-raw_LASSOSUM_MGI-Freeze3_20211120 100021-raw Vitamin D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 310479 0.12 0.000169588024829762 Beta -0.0463 -0.209568-0.116968 -0.0463 -0.209568-0.116968 0.00734 -0.108692-0.123372 0.00734 -0.108692-0.123372 0.0644 -0.010276-0.139076 0.0644 -0.010276-0.139076 0.0193 -0.034992-0.073592 0.0193 -0.034992-0.073592 0.0351 -0.002532-0.072732 0.0351 -0.002532-0.072732 0.0311 -0.015352-0.077552 0.189 0.0204 -0.025464-0.066264 0.384 0.0516 0.005736-0.097464 0.0277 FALSE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 s=1;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003179/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_100021-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_100021-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1012492253432 normal_range 20 50 ng/ml exprsweb-insomnia-1160-pt-mgi-freeze3-20211120 exprsweb-insomnia-1160-pt-mgi-freeze3-20211120 ExPRSweb_insomnia_1160_PT_MGI-Freeze3_20211120 PT ExPRSweb_insomnia_1160_PT_MGI-Freeze3_20211120 1160 Sleep duration Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 147 0.3 0.000324288 0.126 0.494 0.483-0.505 OR 1.16 0.878-1.53 1.16 0.878-1.53 1.19 0.978-1.44 1.19 0.978-1.44 1.02 0.894-1.16 1.02 0.894-1.16 0.957 0.867-1.05 0.957 0.867-1.05 0.976 0.912-1.05 0.976 0.912-1.05 1.05 0.97-1.15 0.217 1.06 0.977-1.16 0.158 1.01 0.92-1.1 0.888 FALSE TRUE FALSE TRUE Both 2830 15811 GRCh37/hg19 1.26e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003320/ScoringFiles/ phewas/ExPRSweb_insomnia_1160_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1160_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126088558793871 binary_exposure exprsweb-insomnia-1160-plink-mgi-freeze3-20211120 exprsweb-insomnia-1160-plink-mgi-freeze3-20211120 ExPRSweb_insomnia_1160_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_insomnia_1160_PLINK_MGI-Freeze3_20211120 1160 Sleep duration Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 148 0.24 0.00036141 0.126 0.493 0.481-0.505 OR 1.13 0.857-1.5 1.13 0.857-1.5 1.14 0.935-1.38 1.14 0.935-1.38 1.07 0.937-1.22 1.07 0.937-1.22 0.964 0.874-1.06 0.964 0.874-1.06 0.983 0.918-1.05 0.983 0.918-1.05 1.03 0.949-1.12 0.471 1.05 0.967-1.15 0.234 1 0.919-1.1 0.919 FALSE TRUE FALSE TRUE Both 2830 15811 GRCh37/hg19 1.26e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003321/ScoringFiles/ phewas/ExPRSweb_insomnia_1160_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1160_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126086678624477 binary_exposure exprsweb-insomnia-1160-dbslmm-mgi-freeze3-20211120 exprsweb-insomnia-1160-dbslmm-mgi-freeze3-20211120 ExPRSweb_insomnia_1160_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_insomnia_1160_DBSLMM_MGI-Freeze3_20211120 1160 Sleep duration Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 8590163 0.13 0.000100406 0.126 0.492 0.481-0.504 OR 0.992 0.74-1.33 0.992 0.74-1.33 0.91 0.735-1.13 0.91 0.735-1.13 0.918 0.801-1.05 0.918 0.801-1.05 0.961 0.871-1.06 0.961 0.871-1.06 0.988 0.924-1.06 0.988 0.924-1.06 0.895 0.825-0.971 0.00778 0.919 0.847-0.997 0.0419 0.927 0.854-1.01 0.0703 FALSE TRUE FALSE TRUE Both 2830 15811 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003322/ScoringFiles/ phewas/ExPRSweb_insomnia_1160_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1160_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126087118399897 binary_exposure exprsweb-insomnia-1160-prscs-mgi-freeze3-20211120 exprsweb-insomnia-1160-prscs-mgi-freeze3-20211120 ExPRSweb_insomnia_1160_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_insomnia_1160_PRSCS_MGI-Freeze3_20211120 1160 Sleep duration Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 0.58 5.68317e-05 0.126 0.499 0.487-0.511 OR 0.979 0.726-1.32 0.979 0.726-1.32 0.948 0.768-1.17 0.948 0.768-1.17 0.991 0.867-1.13 0.991 0.867-1.13 1.02 0.923-1.12 1.02 0.923-1.12 0.99 0.925-1.06 0.99 0.925-1.06 0.982 0.905-1.07 0.664 0.975 0.896-1.06 0.561 0.959 0.879-1.05 0.353 FALSE TRUE FALSE TRUE Both 2830 15811 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003323/ScoringFiles/ phewas/ExPRSweb_insomnia_1160_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1160_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126096766072537 binary_exposure exprsweb-insomnia-1160-lassosum-mgi-freeze3-20211120 exprsweb-insomnia-1160-lassosum-mgi-freeze3-20211120 ExPRSweb_insomnia_1160_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_insomnia_1160_LASSOSUM_MGI-Freeze3_20211120 1160 Sleep duration Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 578551 0.38 0.000241596 0.126 0.498 0.486-0.51 OR 1.09 0.824-1.45 1.09 0.824-1.45 1.1 0.897-1.34 1.1 0.897-1.34 1.01 0.885-1.16 1.01 0.885-1.16 1.04 0.946-1.15 1.04 0.946-1.15 1.01 0.938-1.08 1.01 0.938-1.08 1 0.919-1.09 0.95 1.05 0.956-1.15 0.307 1.03 0.926-1.14 0.601 FALSE TRUE FALSE TRUE Both 2830 15811 GRCh37/hg19 s=1;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003319/ScoringFiles/ phewas/ExPRSweb_insomnia_1160_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1160_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126089570746504 binary_exposure exprsweb-insomnia-1200-pt-mgi-freeze3-20211120 exprsweb-insomnia-1200-pt-mgi-freeze3-20211120 ExPRSweb_insomnia_1200_PT_MGI-Freeze3_20211120 PT ExPRSweb_insomnia_1200_PT_MGI-Freeze3_20211120 1200 Sleeplessness / insomnia Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 28289 3e-05 0.00141358 0.126 0.524 0.512-0.535 OR 1.31 0.995-1.73 1.31 0.995-1.73 1.22 1-1.49 1.22 1-1.49 1.33 1.17-1.5 1.33 1.17-1.5 1.34 1.22-1.46 1.34 1.22-1.46 1.18 1.1-1.26 1.18 1.1-1.26 1.06 0.973-1.15 0.183 1.12 1.03-1.21 0.0102 1.26 1.16-1.37 3.98e-08 TRUE FALSE FALSE TRUE Both 2830 15811 GRCh37/hg19 3.16e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003325/ScoringFiles/ phewas/ExPRSweb_insomnia_1200_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1200_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.125980558383029 binary_exposure exprsweb-insomnia-1200-plink-mgi-freeze3-20211120 exprsweb-insomnia-1200-plink-mgi-freeze3-20211120 ExPRSweb_insomnia_1200_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_insomnia_1200_PLINK_MGI-Freeze3_20211120 1200 Sleeplessness / insomnia Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 27462 1e-04 0.0010819 0.126 0.522 0.511-0.534 OR 1.26 0.959-1.66 1.26 0.959-1.66 1.13 0.921-1.38 1.13 0.921-1.38 1.26 1.11-1.43 1.26 1.11-1.43 1.23 1.12-1.35 1.23 1.12-1.35 1.16 1.09-1.24 1.16 1.09-1.24 1.05 0.964-1.14 0.266 1.12 1.03-1.22 0.00674 1.23 1.13-1.33 1.28e-06 TRUE FALSE FALSE TRUE Both 2830 15811 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003326/ScoringFiles/ phewas/ExPRSweb_insomnia_1200_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1200_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.125999235216056 binary_exposure exprsweb-insomnia-1200-dbslmm-mgi-freeze3-20211120 exprsweb-insomnia-1200-dbslmm-mgi-freeze3-20211120 ExPRSweb_insomnia_1200_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_insomnia_1200_DBSLMM_MGI-Freeze3_20211120 1200 Sleeplessness / insomnia Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6214923 0.07 0.00161683 0.126 0.51 0.499-0.521 OR 1.41 1.08-1.84 1.41 1.08-1.84 1.23 1.01-1.5 1.23 1.01-1.5 1.16 1.02-1.32 1.16 1.02-1.32 1.14 1.04-1.26 1.14 1.04-1.26 1.1 1.03-1.17 1.1 1.03-1.17 1.01 0.929-1.1 0.823 1.14 1.05-1.23 0.00226 1.15 1.06-1.25 0.000817 FALSE FALSE FALSE TRUE Both 2830 15811 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003327/ScoringFiles/ phewas/ExPRSweb_insomnia_1200_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1200_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126079456101814 binary_exposure exprsweb-insomnia-1200-prscs-mgi-freeze3-20211120 exprsweb-insomnia-1200-prscs-mgi-freeze3-20211120 ExPRSweb_insomnia_1200_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_insomnia_1200_PRSCS_MGI-Freeze3_20211120 1200 Sleeplessness / insomnia Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1065129 5e-06 0.000899257 0.126 0.524 0.513-0.536 OR 1.56 1.2-2.02 1.56 1.2-2.02 1.37 1.13-1.66 1.37 1.13-1.66 1.25 1.1-1.42 1.25 1.1-1.42 1.24 1.13-1.36 1.24 1.13-1.36 1.16 1.09-1.24 1.16 1.09-1.24 1.08 0.998-1.18 0.0565 1.1 1.01-1.2 0.0261 1.23 1.13-1.34 8.64e-07 TRUE FALSE FALSE TRUE Both 2830 15811 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003328/ScoringFiles/ phewas/ExPRSweb_insomnia_1200_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1200_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.12594849711453 binary_exposure exprsweb-insomnia-1200-lassosum-mgi-freeze3-20211120 exprsweb-insomnia-1200-lassosum-mgi-freeze3-20211120 ExPRSweb_insomnia_1200_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_insomnia_1200_LASSOSUM_MGI-Freeze3_20211120 1200 Sleeplessness / insomnia Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 464576 0.22 0.0010052 0.126 0.507 0.496-0.518 OR 1.11 0.832-1.48 1.11 0.832-1.48 1.09 0.891-1.34 1.09 0.891-1.34 1.11 0.974-1.26 1.11 0.974-1.26 1.12 1.01-1.23 1.12 1.01-1.23 1.09 1.02-1.16 1.09 1.02-1.16 0.992 0.913-1.08 0.85 1.07 0.987-1.16 0.0975 1.11 1.02-1.2 0.0147 FALSE FALSE FALSE TRUE Both 2830 15811 GRCh37/hg19 s=0.9;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003324/ScoringFiles/ phewas/ExPRSweb_insomnia_1200_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_insomnia_1200_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.126082125252409 binary_exposure exprsweb-hypertension-20002-1065-pt-mgi-freeze3-20211120 exprsweb-hypertension-20002-1065-pt-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1065_PT_MGI-Freeze3_20211120 PT ExPRSweb_Hypertension_20002-1065_PT_MGI-Freeze3_20211120 20002-1065 Non-cancer illness code, self-reported: hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 26671 3.4e-160 0.0294432 0.185 0.612 0.603-0.62 OR 3.08 2.46-3.86 3.08 2.46-3.86 2.87 2.45-3.37 2.87 2.45-3.37 2.44 2.21-2.7 2.44 2.21-2.7 2.26 2.11-2.44 2.26 2.11-2.44 1.97 1.88-2.07 1.97 1.88-2.07 1.51 1.42-1.61 3.34e-37 1.94 1.82-2.07 9.8e-91 3.01 2.81-3.21 3.03e-232 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 1.26e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002995/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1065_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1065_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.184975100343226 binary_exposure exprsweb-hypertension-20002-1065-plink-mgi-freeze3-20211120 exprsweb-hypertension-20002-1065-plink-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1065_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Hypertension_20002-1065_PLINK_MGI-Freeze3_20211120 20002-1065 Non-cancer illness code, self-reported: hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 25909 1.7e-157 0.0288883 0.185 0.611 0.602-0.619 OR 2.97 2.38-3.72 2.97 2.38-3.72 3 2.55-3.52 3 2.55-3.52 2.56 2.31-2.83 2.56 2.31-2.83 2.22 2.06-2.38 2.22 2.06-2.38 1.96 1.87-2.06 1.96 1.87-2.06 1.5 1.41-1.6 1.9e-35 1.93 1.81-2.06 1.82e-90 2.98 2.79-3.18 2.34e-229 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 1.26e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002996/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1065_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1065_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.185087913353158 binary_exposure exprsweb-hypertension-20002-1065-dbslmm-mgi-freeze3-20211120 exprsweb-hypertension-20002-1065-dbslmm-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1065_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Hypertension_20002-1065_DBSLMM_MGI-Freeze3_20211120 20002-1065 Non-cancer illness code, self-reported: hypertension Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7601215 1.1e-80 0.0136247 0.189 0.58 0.572-0.59 OR 2.19 1.77-2.72 2.19 1.77-2.72 2.27 1.95-2.65 2.27 1.95-2.65 1.91 1.74-2.11 1.91 1.74-2.11 1.69 1.58-1.81 1.69 1.58-1.81 1.6 1.52-1.68 1.6 1.52-1.68 1.29 1.21-1.37 5.69e-16 1.63 1.54-1.73 3.16e-56 2.06 1.94-2.18 2.98e-121 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002997/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1065_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1065_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.188589421533499 binary_exposure exprsweb-hypertension-20002-1065-prscs-mgi-freeze3-20211120 exprsweb-hypertension-20002-1065-prscs-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1065_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Hypertension_20002-1065_PRSCS_MGI-Freeze3_20211120 20002-1065 Non-cancer illness code, self-reported: hypertension Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 6.4e-213 0.0392809 0.182 0.63 0.622-0.639 OR 3.99 3.16-5.03 3.99 3.16-5.03 3.28 2.79-3.85 3.28 2.79-3.85 2.93 2.64-3.24 2.93 2.64-3.24 2.65 2.46-2.85 2.65 2.46-2.85 2.24 2.13-2.35 2.24 2.13-2.35 1.58 1.48-1.69 2.42e-43 2.17 2.04-2.32 2.66e-122 3.55 3.32-3.79 1e-307 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002998/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1065_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1065_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182468993927855 binary_exposure exprsweb-hypertension-20002-1065-lassosum-mgi-freeze3-20211120 exprsweb-hypertension-20002-1065-lassosum-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1065_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Hypertension_20002-1065_LASSOSUM_MGI-Freeze3_20211120 20002-1065 Non-cancer illness code, self-reported: hypertension Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 724579 6.9e-203 0.0359291 0.183 0.628 0.62-0.636 OR 3.38 2.69-4.23 3.38 2.69-4.23 3.12 2.66-3.65 3.12 2.66-3.65 2.64 2.39-2.92 2.64 2.39-2.92 2.43 2.26-2.62 2.43 2.26-2.62 2.17 2.07-2.29 2.17 2.07-2.29 1.61 1.51-1.72 8.33e-48 2.12 1.99-2.26 5.45e-117 3.4 3.19-3.63 4.85e-300 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 s=0.5;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002994/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1065_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1065_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182914188952237 binary_exposure exprsweb-hypertension-20002-1072-pt-mgi-freeze3-20211120 exprsweb-hypertension-20002-1072-pt-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1072_PT_MGI-Freeze3_20211120 PT ExPRSweb_Hypertension_20002-1072_PT_MGI-Freeze3_20211120 20002-1072 Non-cancer illness code, self-reported: essential hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 83829 0.024 0.00101382 0.192 0.507 0.498-0.516 OR 1.19 0.963-1.46 1.19 0.963-1.46 1.12 0.965-1.3 1.12 0.965-1.3 1.17 1.06-1.28 1.17 1.06-1.28 1.18 1.1-1.27 1.18 1.1-1.27 1.13 1.08-1.19 1.13 1.08-1.19 1.03 0.967-1.09 0.405 1.05 0.991-1.11 0.0995 1.17 1.1-1.24 1.5e-07 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003000/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1072_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1072_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191849083055941 binary_exposure exprsweb-hypertension-20002-1072-plink-mgi-freeze3-20211120 exprsweb-hypertension-20002-1072-plink-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1072_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Hypertension_20002-1072_PLINK_MGI-Freeze3_20211120 20002-1072 Non-cancer illness code, self-reported: essential hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 81218 0.034 0.00103866 0.192 0.507 0.498-0.516 OR 1.24 1-1.53 1.24 1-1.53 1.17 1.01-1.35 1.17 1.01-1.35 1.2 1.09-1.32 1.2 1.09-1.32 1.19 1.11-1.27 1.19 1.11-1.27 1.12 1.07-1.18 1.12 1.07-1.18 1.01 0.948-1.07 0.837 1.04 0.982-1.1 0.18 1.14 1.08-1.21 7.01e-06 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003001/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1072_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1072_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191853593777363 binary_exposure exprsweb-hypertension-20002-1072-dbslmm-mgi-freeze3-20211120 exprsweb-hypertension-20002-1072-dbslmm-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1072_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Hypertension_20002-1072_DBSLMM_MGI-Freeze3_20211120 20002-1072 Non-cancer illness code, self-reported: essential hypertension Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7601215 0.86 0.000127791 0.192 0.486 0.478-0.495 OR 1 0.815-1.24 1 0.815-1.24 0.992 0.854-1.15 0.992 0.854-1.15 1.07 0.977-1.18 1.07 0.977-1.18 1.05 0.975-1.12 1.05 0.975-1.12 1.01 0.963-1.06 1.01 0.963-1.06 0.999 0.942-1.06 0.974 0.987 0.93-1.05 0.65 1 0.945-1.06 0.942 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003002/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1072_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1072_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.19190294215058 binary_exposure exprsweb-hypertension-20002-1072-prscs-mgi-freeze3-20211120 exprsweb-hypertension-20002-1072-prscs-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1072_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Hypertension_20002-1072_PRSCS_MGI-Freeze3_20211120 20002-1072 Non-cancer illness code, self-reported: essential hypertension Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1109030 0.00012 0.00206427 0.192 0.516 0.507-0.524 OR 1.54 1.25-1.9 1.54 1.25-1.9 1.48 1.27-1.71 1.48 1.27-1.71 1.28 1.17-1.41 1.28 1.17-1.41 1.21 1.13-1.3 1.21 1.13-1.3 1.21 1.15-1.26 1.21 1.15-1.26 0.994 0.937-1.05 0.838 1.08 1.02-1.15 0.00951 1.23 1.16-1.31 3.16e-12 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003003/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1072_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1072_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191754292244979 binary_exposure exprsweb-hypertension-20002-1072-lassosum-mgi-freeze3-20211120 exprsweb-hypertension-20002-1072-lassosum-mgi-freeze3-20211120 ExPRSweb_Hypertension_20002-1072_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Hypertension_20002-1072_LASSOSUM_MGI-Freeze3_20211120 20002-1072 Non-cancer illness code, self-reported: essential hypertension Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 313080 0.017 0.00134881 0.192 0.508 0.498-0.516 OR 1.28 1.04-1.58 1.28 1.04-1.58 1.26 1.08-1.46 1.26 1.08-1.46 1.24 1.13-1.37 1.24 1.13-1.37 1.2 1.12-1.28 1.2 1.12-1.28 1.1 1.05-1.16 1.1 1.05-1.16 1.03 0.974-1.1 0.275 1.05 0.986-1.11 0.137 1.13 1.07-1.2 3.22e-05 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 s=0.5;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002999/ScoringFiles/ phewas/ExPRSweb_Hypertension_20002-1072_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_20002-1072_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191843362750503 binary_exposure exprsweb-smoker-yes-20116-1-pt-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-1-pt-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-1_PT_MGI-Freeze3_20211120 PT ExPRSweb_Smoker-Yes_20116-1_PT_MGI-Freeze3_20211120 20116-1 Smoking status: Previous Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 14682 2.8e-45 0.00940504 0.238 0.555 0.547-0.562 OR 1.61 1.33-1.94 1.61 1.33-1.94 1.71 1.49-1.96 1.71 1.49-1.96 1.47 1.35-1.61 1.47 1.35-1.61 1.41 1.33-1.5 1.41 1.33-1.5 1.4 1.34-1.46 1.4 1.34-1.46 1.19 1.12-1.25 1.13e-09 1.36 1.29-1.44 4.07e-29 1.63 1.55-1.72 1e-71 TRUE FALSE FALSE TRUE Both 10760 11262 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003045/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-1_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-1_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.237967007441938 binary_exposure exprsweb-smoker-yes-20116-1-plink-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-1-plink-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-1_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Smoker-Yes_20116-1_PLINK_MGI-Freeze3_20211120 20116-1 Smoking status: Previous Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 27004 1.8e-26 0.00594896 0.239 0.541 0.533-0.549 OR 1.39 1.15-1.68 1.39 1.15-1.68 1.39 1.21-1.59 1.39 1.21-1.59 1.37 1.25-1.5 1.37 1.25-1.5 1.38 1.3-1.47 1.38 1.3-1.47 1.29 1.23-1.35 1.29 1.23-1.35 1.17 1.1-1.23 5.08e-08 1.26 1.19-1.33 2.88e-16 1.46 1.38-1.54 2.83e-41 TRUE FALSE FALSE TRUE Both 10760 11262 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003046/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-1_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-1_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.23890346876979 binary_exposure exprsweb-smoker-yes-20116-1-dbslmm-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-1-dbslmm-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-1_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Smoker-Yes_20116-1_DBSLMM_MGI-Freeze3_20211120 20116-1 Smoking status: Previous Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7075957 1.1e-42 0.0076763 0.238 0.552 0.545-0.56 OR 1.75 1.45-2.12 1.75 1.45-2.12 1.64 1.43-1.88 1.64 1.43-1.88 1.5 1.38-1.64 1.5 1.38-1.64 1.48 1.39-1.58 1.48 1.39-1.58 1.37 1.31-1.43 1.37 1.31-1.43 1.23 1.17-1.3 8.84e-14 1.35 1.28-1.43 3.38e-27 1.62 1.53-1.71 1.65e-65 TRUE FALSE FALSE TRUE Both 10760 11262 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003047/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-1_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-1_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.238084151896042 binary_exposure exprsweb-smoker-yes-20116-1-prscs-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-1-prscs-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-1_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Smoker-Yes_20116-1_PRSCS_MGI-Freeze3_20211120 20116-1 Smoking status: Previous Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 4.9e-81 0.0179627 0.236 0.573 0.565-0.579 OR 2.03 1.67-2.46 2.03 1.67-2.46 2.05 1.78-2.35 2.05 1.78-2.35 1.78 1.63-1.94 1.78 1.63-1.94 1.65 1.55-1.76 1.65 1.55-1.76 1.57 1.5-1.64 1.57 1.5-1.64 1.3 1.23-1.37 3.04e-20 1.53 1.45-1.62 1.82e-51 1.94 1.84-2.05 8.2e-123 TRUE FALSE FALSE TRUE Both 11544 11788 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003048/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-1_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-1_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.236368722484491 binary_exposure exprsweb-smoker-yes-20116-1-lassosum-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-1-lassosum-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-1_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Smoker-Yes_20116-1_LASSOSUM_MGI-Freeze3_20211120 20116-1 Smoking status: Previous Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 520707 7.9e-62 0.0133462 0.237 0.565 0.557-0.572 OR 1.5 1.25-1.82 1.5 1.25-1.82 1.63 1.43-1.87 1.63 1.43-1.87 1.61 1.48-1.76 1.61 1.48-1.76 1.56 1.47-1.66 1.56 1.47-1.66 1.49 1.42-1.55 1.49 1.42-1.55 1.22 1.15-1.29 1.93e-12 1.47 1.39-1.55 6.61e-43 1.79 1.69-1.89 1.14e-97 TRUE FALSE FALSE TRUE Both 10760 11262 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003044/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-1_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-1_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.237089433210484 binary_exposure exprsweb-smoker-yes-20116-2-pt-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-2-pt-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-2_PT_MGI-Freeze3_20211120 PT ExPRSweb_Smoker-Yes_20116-2_PT_MGI-Freeze3_20211120 20116-2 Smoking status: Current Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1485 0.0015 0.000922569 0.198 0.511 0.503-0.52 OR 1.09 0.89-1.33 1.09 0.89-1.33 1.13 0.979-1.31 1.13 0.979-1.31 1.11 1.01-1.22 1.11 1.01-1.22 1.1 1.03-1.18 1.1 1.03-1.18 1.12 1.07-1.17 1.12 1.07-1.17 1.07 1.01-1.13 0.0247 1.1 1.04-1.17 0.000907 1.18 1.11-1.26 5.21e-08 TRUE FALSE FALSE TRUE Both 7441 15890 GRCh37/hg19 3.16e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003050/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-2_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-2_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.198233188363558 binary_exposure exprsweb-smoker-yes-20116-2-plink-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-2-plink-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-2_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Smoker-Yes_20116-2_PLINK_MGI-Freeze3_20211120 20116-2 Smoking status: Current Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2146 0.00013 0.000597197 0.198 0.514 0.506-0.523 OR 1.02 0.83-1.25 1.02 0.83-1.25 1.01 0.872-1.17 1.01 0.872-1.17 1.07 0.976-1.18 1.07 0.976-1.18 1.1 1.02-1.17 1.1 1.02-1.17 1.09 1.04-1.15 1.09 1.04-1.15 1.1 1.04-1.17 0.00129 1.13 1.07-1.2 2.88e-05 1.19 1.12-1.26 1.29e-08 TRUE FALSE FALSE TRUE Both 7441 15890 GRCh37/hg19 3.16e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003051/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-2_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-2_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.198173487073831 binary_exposure exprsweb-smoker-yes-20116-2-dbslmm-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-2-dbslmm-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-2_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Smoker-Yes_20116-2_DBSLMM_MGI-Freeze3_20211120 20116-2 Smoking status: Current Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6575783 1.7e-10 0.000498011 0.198 0.524 0.517-0.532 OR 1.24 1.02-1.52 1.24 1.02-1.52 1.16 1.01-1.34 1.16 1.01-1.34 1.19 1.08-1.3 1.19 1.08-1.3 1.15 1.07-1.23 1.15 1.07-1.23 1.14 1.09-1.2 1.14 1.09-1.2 1.15 1.09-1.22 1.94e-06 1.16 1.09-1.23 7.94e-07 1.26 1.19-1.34 7.62e-14 TRUE FALSE FALSE TRUE Both 7441 15890 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003052/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-2_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-2_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.19797339335352 binary_exposure exprsweb-smoker-yes-20116-2-prscs-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-2-prscs-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-2_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Smoker-Yes_20116-2_PRSCS_MGI-Freeze3_20211120 20116-2 Smoking status: Current Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 5.1e-14 0.00096072 0.198 0.53 0.522-0.538 OR 1.01 0.82-1.24 1.01 0.82-1.24 1.07 0.925-1.24 1.07 0.925-1.24 1.09 0.993-1.2 1.09 0.993-1.2 1.12 1.05-1.2 1.12 1.05-1.2 1.17 1.11-1.23 1.17 1.11-1.23 1.16 1.09-1.23 1.28e-06 1.23 1.15-1.3 2.6e-11 1.33 1.25-1.41 1.37e-19 TRUE FALSE FALSE TRUE Both 7441 15890 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003053/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-2_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-2_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.197813500720797 binary_exposure exprsweb-smoker-yes-20116-2-lassosum-mgi-freeze3-20211120 exprsweb-smoker-yes-20116-2-lassosum-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20116-2_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Smoker-Yes_20116-2_LASSOSUM_MGI-Freeze3_20211120 20116-2 Smoking status: Current Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 515021 7.7e-11 0.00113587 0.198 0.527 0.518-0.535 OR 1.02 0.83-1.26 1.02 0.83-1.26 1.1 0.948-1.27 1.1 0.948-1.27 1.13 1.03-1.24 1.13 1.03-1.24 1.16 1.08-1.24 1.16 1.08-1.24 1.12 1.07-1.17 1.12 1.07-1.17 1.14 1.07-1.21 1.82e-05 1.26 1.19-1.34 5.73e-15 1.26 1.19-1.34 3.97e-14 TRUE FALSE FALSE TRUE Both 7441 15890 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003049/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20116-2_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20116-2_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.197955438210129 binary_exposure exprsweb-dinker-yes-20117-2-pt-mgi-freeze3-20211120 exprsweb-dinker-yes-20117-2-pt-mgi-freeze3-20211120 ExPRSweb_Dinker-Yes_20117-2_PT_MGI-Freeze3_20211120 PT ExPRSweb_Dinker-Yes_20117-2_PT_MGI-Freeze3_20211120 20117-2 Alcohol drinker status: Current Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10123 2.1e-14 0.00187949 0.213 0.533 0.525-0.541 OR 1.08 0.88-1.32 1.08 0.88-1.32 1.18 1.02-1.37 1.18 1.02-1.37 1.23 1.12-1.35 1.23 1.12-1.35 1.2 1.12-1.29 1.2 1.12-1.29 1.17 1.12-1.23 1.17 1.12-1.23 1.09 1.03-1.15 0.00434 1.18 1.12-1.25 9.91e-09 1.3 1.22-1.37 8.64e-19 TRUE FALSE FALSE TRUE Both 15343 7082 GRCh37/hg19 6.31e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002910/ScoringFiles/ phewas/ExPRSweb_Dinker-Yes_20117-2_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Dinker-Yes_20117-2_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.212537118525135 binary_exposure exprsweb-dinker-yes-20117-2-plink-mgi-freeze3-20211120 exprsweb-dinker-yes-20117-2-plink-mgi-freeze3-20211120 ExPRSweb_Dinker-Yes_20117-2_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Dinker-Yes_20117-2_PLINK_MGI-Freeze3_20211120 20117-2 Alcohol drinker status: Current Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 20050 8.4e-08 0.00293612 0.213 0.521 0.513-0.529 OR 1.04 0.848-1.28 1.04 0.848-1.28 0.972 0.842-1.12 0.972 0.842-1.12 1.15 1.04-1.26 1.15 1.04-1.26 1.18 1.1-1.27 1.18 1.1-1.27 1.17 1.11-1.22 1.17 1.11-1.22 1.07 1.01-1.14 0.0171 1.13 1.07-1.2 3.1e-05 1.27 1.2-1.34 6.48e-16 TRUE FALSE FALSE TRUE Both 15343 7082 GRCh37/hg19 5.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002911/ScoringFiles/ phewas/ExPRSweb_Dinker-Yes_20117-2_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Dinker-Yes_20117-2_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.212800755161031 binary_exposure exprsweb-dinker-yes-20117-2-dbslmm-mgi-freeze3-20211120 exprsweb-dinker-yes-20117-2-dbslmm-mgi-freeze3-20211120 ExPRSweb_Dinker-Yes_20117-2_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Dinker-Yes_20117-2_DBSLMM_MGI-Freeze3_20211120 20117-2 Alcohol drinker status: Current Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 8598752 0.011 0.00100588 0.213 0.52 0.512-0.528 OR 0.995 0.809-1.22 0.995 0.809-1.22 1 0.865-1.16 1 0.865-1.16 1 0.914-1.1 1 0.914-1.1 1.03 0.963-1.1 1.03 0.963-1.1 1.08 1.03-1.13 1.08 1.03-1.13 1.09 1.03-1.15 0.00416 1.1 1.04-1.16 0.00141 1.13 1.07-1.2 2.1e-05 TRUE FALSE FALSE TRUE Both 15343 7082 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002912/ScoringFiles/ phewas/ExPRSweb_Dinker-Yes_20117-2_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Dinker-Yes_20117-2_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213026520618921 binary_exposure exprsweb-dinker-yes-20117-2-prscs-mgi-freeze3-20211120 exprsweb-dinker-yes-20117-2-prscs-mgi-freeze3-20211120 ExPRSweb_Dinker-Yes_20117-2_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Dinker-Yes_20117-2_PRSCS_MGI-Freeze3_20211120 20117-2 Alcohol drinker status: Current Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 5.1e-29 0.00642389 0.212 0.547 0.539-0.555 OR 1.54 1.23-1.92 1.54 1.23-1.92 1.42 1.21-1.65 1.42 1.21-1.65 1.39 1.26-1.53 1.39 1.26-1.53 1.37 1.28-1.47 1.37 1.28-1.47 1.33 1.27-1.4 1.33 1.27-1.4 1.1 1.04-1.17 0.00138 1.28 1.21-1.35 1.07e-16 1.48 1.39-1.57 1.12e-39 TRUE FALSE FALSE TRUE Both 15343 7082 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002913/ScoringFiles/ phewas/ExPRSweb_Dinker-Yes_20117-2_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Dinker-Yes_20117-2_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.211879001976941 binary_exposure exprsweb-dinker-yes-20117-2-lassosum-mgi-freeze3-20211120 exprsweb-dinker-yes-20117-2-lassosum-mgi-freeze3-20211120 ExPRSweb_Dinker-Yes_20117-2_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Dinker-Yes_20117-2_LASSOSUM_MGI-Freeze3_20211120 20117-2 Alcohol drinker status: Current Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 396976 6e-22 0.0039407 0.212 0.539 0.531-0.548 OR 1.38 1.11-1.71 1.38 1.11-1.71 1.33 1.14-1.55 1.33 1.14-1.55 1.31 1.19-1.45 1.31 1.19-1.45 1.25 1.16-1.34 1.25 1.16-1.34 1.23 1.18-1.29 1.23 1.18-1.29 1.11 1.05-1.18 0.000455 1.22 1.15-1.3 8.2e-12 1.37 1.29-1.45 2.3e-26 TRUE FALSE FALSE TRUE Both 15343 7082 GRCh37/hg19 s=0.9;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002909/ScoringFiles/ phewas/ExPRSweb_Dinker-Yes_20117-2_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Dinker-Yes_20117-2_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.212188237788981 binary_exposure exprsweb-smoker-yes-20160-pt-mgi-freeze3-20211120 exprsweb-smoker-yes-20160-pt-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20160_PT_MGI-Freeze3_20211120 PT ExPRSweb_Smoker-Yes_20160_PT_MGI-Freeze3_20211120 20160 Ever smoked Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 8787 5.4e-55 0.014311 0.238 0.559 0.552-0.567 OR 1.52 1.26-1.84 1.52 1.26-1.84 1.66 1.45-1.9 1.66 1.45-1.9 1.61 1.48-1.76 1.61 1.48-1.76 1.53 1.44-1.63 1.53 1.44-1.63 1.47 1.41-1.53 1.47 1.41-1.53 1.28 1.21-1.35 3.32e-18 1.41 1.33-1.49 2.41e-34 1.79 1.7-1.89 4.09e-97 TRUE FALSE FALSE TRUE Both 11434 11898 GRCh37/hg19 3.16e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003055/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20160_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20160_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.23816773672373 binary_exposure exprsweb-smoker-yes-20160-plink-mgi-freeze3-20211120 exprsweb-smoker-yes-20160-plink-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20160_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Smoker-Yes_20160_PLINK_MGI-Freeze3_20211120 20160 Ever smoked Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 14184 7.3e-44 0.0108093 0.239 0.553 0.546-0.561 OR 1.63 1.35-1.98 1.63 1.35-1.98 1.41 1.24-1.62 1.41 1.24-1.62 1.51 1.39-1.65 1.51 1.39-1.65 1.46 1.37-1.56 1.46 1.37-1.56 1.38 1.32-1.44 1.38 1.32-1.44 1.2 1.13-1.26 1.46e-10 1.42 1.34-1.5 2.79e-36 1.65 1.57-1.75 3.23e-73 TRUE FALSE FALSE TRUE Both 11434 11898 GRCh37/hg19 1.58e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003056/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20160_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20160_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.238725261765509 binary_exposure exprsweb-smoker-yes-20160-dbslmm-mgi-freeze3-20211120 exprsweb-smoker-yes-20160-dbslmm-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20160_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Smoker-Yes_20160_DBSLMM_MGI-Freeze3_20211120 20160 Ever smoked Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7433494 1.7e-54 0.0120488 0.238 0.558 0.551-0.565 OR 1.84 1.52-2.22 1.84 1.52-2.22 1.79 1.56-2.05 1.79 1.56-2.05 1.61 1.47-1.75 1.61 1.47-1.75 1.52 1.43-1.62 1.52 1.43-1.62 1.42 1.36-1.48 1.42 1.36-1.48 1.24 1.17-1.31 4.23e-14 1.41 1.34-1.49 5.47e-35 1.73 1.64-1.83 5.56e-85 TRUE FALSE FALSE TRUE Both 11434 11898 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003057/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20160_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20160_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.238207610002442 binary_exposure exprsweb-smoker-yes-20160-prscs-mgi-freeze3-20211120 exprsweb-smoker-yes-20160-prscs-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20160_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Smoker-Yes_20160_PRSCS_MGI-Freeze3_20211120 20160 Ever smoked Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 1.9e-103 0.0240822 0.235 0.583 0.575-0.591 OR 2.02 1.66-2.45 2.02 1.66-2.45 2.04 1.78-2.34 2.04 1.78-2.34 1.92 1.76-2.1 1.92 1.76-2.1 1.82 1.71-1.94 1.82 1.71-1.94 1.66 1.59-1.73 1.66 1.59-1.73 1.33 1.25-1.4 1.66e-22 1.61 1.52-1.7 5.47e-61 2.14 2.02-2.26 2.68e-148 TRUE FALSE FALSE TRUE Both 11544 11788 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003058/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20160_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20160_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.235263480790125 binary_exposure exprsweb-smoker-yes-20160-lassosum-mgi-freeze3-20211120 exprsweb-smoker-yes-20160-lassosum-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_20160_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Smoker-Yes_20160_LASSOSUM_MGI-Freeze3_20211120 20160 Ever smoked Binary CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 595975 1.2e-88 0.019081 0.237 0.577 0.57-0.584 OR 1.95 1.61-2.37 1.95 1.61-2.37 1.95 1.7-2.23 1.95 1.7-2.23 1.72 1.58-1.88 1.72 1.58-1.88 1.64 1.54-1.75 1.64 1.54-1.75 1.56 1.49-1.63 1.56 1.49-1.63 1.27 1.2-1.34 1.51e-16 1.53 1.45-1.62 8.35e-52 1.98 1.88-2.1 1.27e-127 TRUE FALSE FALSE TRUE Both 11434 11898 GRCh37/hg19 s=0.9;Lambda=0.00127 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003054/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_20160_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_20160_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.236515318666683 binary_exposure exprsweb-egfr-20171017-mw-egfr-ea-pt-mgi-freeze3-20211120 exprsweb-egfr-20171017-mw-egfr-ea-pt-mgi-freeze3-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_MGI-Freeze3_20211120 20171017-MW-eGFR-EA eGFR Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 2439 3.4e-96 0.0161933736618359 Beta 0.253 0.174404-0.331596 0.253 0.174404-0.331596 0.256 0.20014-0.31186 0.256 0.20014-0.31186 0.224 0.188132-0.259868 0.224 0.188132-0.259868 0.214 0.187932-0.240068 0.214 0.187932-0.240068 0.205 0.1868308-0.2231692 0.205 0.1868308-0.2231692 0.138 0.116048-0.159952 1.79e-34 0.204 0.181656-0.226344 1.28e-71 0.327 0.304264-0.349736 7.75e-176 TRUE FALSE FALSE TRUE Both 19504 0 GRCh37/hg19 1.58e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003220/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 293.366498235793 normal_range exprsweb-egfr-20171017-mw-egfr-ea-plink-mgi-freeze3-20211120 exprsweb-egfr-20171017-mw-egfr-ea-plink-mgi-freeze3-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_MGI-Freeze3_20211120 20171017-MW-eGFR-EA eGFR Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 2491 7.2e-97 0.0165476140195244 Beta 0.254 0.175404-0.332596 0.254 0.175404-0.332596 0.236 0.18014-0.29186 0.236 0.18014-0.29186 0.233 0.197132-0.268868 0.233 0.197132-0.268868 0.222 0.195932-0.248068 0.222 0.195932-0.248068 0.208 0.1898308-0.2261692 0.208 0.1898308-0.2261692 0.131 0.108852-0.153148 4.18e-31 0.203 0.180656-0.225344 2.63e-71 0.326 0.303264-0.348736 2.12e-175 TRUE FALSE FALSE TRUE Both 19504 0 GRCh37/hg19 1.58e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003221/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 293.320600233418 normal_range exprsweb-egfr-20171017-mw-egfr-ea-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-20171017-mw-egfr-ea-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_MGI-Freeze3_20211120 20171017-MW-eGFR-EA eGFR Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 4656243 9.8e-106 0.0183268885443117 Beta 0.245 0.166404-0.323596 0.245 0.166404-0.323596 0.236 0.18014-0.29186 0.236 0.18014-0.29186 0.23 0.193936-0.266064 0.23 0.193936-0.266064 0.232 0.205736-0.258264 0.232 0.205736-0.258264 0.217 0.1987916-0.2352084 0.217 0.1987916-0.2352084 0.12 0.097852-0.142148 2.11e-26 0.213 0.190656-0.235344 1.74e-77 0.334 0.311068-0.356932 1.65e-178 TRUE FALSE FALSE TRUE Both 19504 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003222/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 292.722202913889 normal_range exprsweb-egfr-20171017-mw-egfr-ea-prscs-mgi-freeze3-20211120 exprsweb-egfr-20171017-mw-egfr-ea-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_MGI-Freeze3_20211120 20171017-MW-eGFR-EA eGFR Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 1117334 3.8e-150 0.022649714784634 Beta 0.28 0.201404-0.358596 0.28 0.201404-0.358596 0.262 0.20614-0.31786 0.262 0.20614-0.31786 0.268 0.231936-0.304064 0.268 0.231936-0.304064 0.26 0.233736-0.286264 0.26 0.233736-0.286264 0.248 0.2297916-0.2662084 0.248 0.2297916-0.2662084 0.168 0.146048-0.189952 2.07e-50 0.252 0.229264-0.274736 2.09e-105 0.397 0.373872-0.420128 2.2e-248 TRUE FALSE FALSE TRUE Both 19504 0 GRCh37/hg19 PRS_auto_traiteGFR_prefix20171017_MW_eGFR_EA https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003223/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 289.759474242228 normal_range exprsweb-egfr-20171017-mw-egfr-ea-lassosum-mgi-freeze3-20211120 exprsweb-egfr-20171017-mw-egfr-ea-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_MGI-Freeze3_20211120 20171017-MW-eGFR-EA eGFR Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 443281 2.5e-144 0.0212026166318369 Beta 0.275 0.196404-0.353596 0.275 0.196404-0.353596 0.267 0.21114-0.32286 0.267 0.21114-0.32286 0.282 0.246132-0.317868 0.282 0.246132-0.317868 0.258 0.231736-0.284264 0.258 0.231736-0.284264 0.241 0.2228112-0.2591888 0.241 0.2228112-0.2591888 0.163 0.140852-0.185148 1.37e-47 0.241 0.218656-0.263344 8.65e-99 0.381 0.358068-0.403932 4.1e-231 TRUE FALSE FALSE TRUE Both 19504 0 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003219/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 290.144161529557 normal_range exprsweb-egfr-20171017-mw-egfr-ea-pt-ukb-20211120 exprsweb-egfr-20171017-mw-egfr-ea-pt-ukb-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_UKB_20211120 PT ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_UKB_20211120 20171017-MW-eGFR-EA eGFR Quantitative UKB UK Biobank C+T (DS) Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 2092 4.5e-2945 0.0536861931637489 Beta 0.521 0.493168-0.548832 0.521 0.493168-0.548832 0.492 0.472204-0.511796 0.492 0.472204-0.511796 0.457 0.4443188-0.4696812 0.457 0.4443188-0.4696812 0.422 0.4128272-0.4311728 0.422 0.4128272-0.4311728 0.375 0.3686888-0.3813112 0.375 0.3686888-0.3813112 0.235 0.2269836-0.2430164 1e-722 0.388 0.3801404-0.3958596 1e-2030 0.583 0.5753364-0.5906636 1e-4840 TRUE FALSE FALSE TRUE Both 195023 0 GRCh37/hg19 1.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003225/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PT_UKB_20211120/exclusion.tsv 2021-01-10 128.973865673365 normal_range exprsweb-egfr-20171017-mw-egfr-ea-plink-ukb-20211120 exprsweb-egfr-20171017-mw-egfr-ea-plink-ukb-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_UKB_20211120 20171017-MW-eGFR-EA eGFR Quantitative UKB UK Biobank C+T (GT) Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 2127 3.4e-2920 0.0531816834765562 Beta 0.524 0.496168-0.551832 0.524 0.496168-0.551832 0.487 0.467204-0.506796 0.487 0.467204-0.506796 0.457 0.4443188-0.4696812 0.457 0.4443188-0.4696812 0.419 0.4098272-0.4281728 0.419 0.4098272-0.4281728 0.374 0.3676888-0.3803112 0.374 0.3676888-0.3803112 0.235 0.2269836-0.2430164 1e-723 0.385 0.3771404-0.3928596 1e-2000 0.581 0.5733364-0.5886636 1e-4810 TRUE FALSE FALSE TRUE Both 195023 0 GRCh37/hg19 1.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003226/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 129.044748537005 normal_range exprsweb-egfr-20171017-mw-egfr-ea-dbslmm-ukb-20211120 exprsweb-egfr-20171017-mw-egfr-ea-dbslmm-ukb-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_UKB_20211120 20171017-MW-eGFR-EA eGFR Quantitative UKB UK Biobank DBSLMM Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 4728961 4.3e-3279 0.0568784575329485 Beta 0.579 0.551168-0.606832 0.579 0.551168-0.606832 0.529 0.509204-0.548796 0.529 0.509204-0.548796 0.473 0.4603188-0.4856812 0.473 0.4603188-0.4856812 0.434 0.4248272-0.4431728 0.434 0.4248272-0.4431728 0.39 0.3836888-0.3963112 0.39 0.3836888-0.3963112 0.243 0.2349836-0.2510164 1e-769 0.401 0.39316-0.40884 1e-2180 0.605 0.5973952-0.6126048 1e-5270 TRUE FALSE FALSE TRUE Both 195023 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003227/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 128.029654785712 normal_range exprsweb-egfr-20171017-mw-egfr-ea-prscs-ukb-20211120 exprsweb-egfr-20171017-mw-egfr-ea-prscs-ukb-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_UKB_20211120 20171017-MW-eGFR-EA eGFR Quantitative UKB UK Biobank PRS-CS Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 1118118 2.4e-3563 0.062417750901678 Beta 0.604 0.576168-0.631832 0.604 0.576168-0.631832 0.553 0.533204-0.572796 0.553 0.533204-0.572796 0.493 0.4803384-0.5056616 0.493 0.4803384-0.5056616 0.458 0.4488468-0.4671532 0.458 0.4488468-0.4671532 0.407 0.4007084-0.4132916 0.407 0.4007084-0.4132916 0.254 0.2460032-0.2619968 1e-846 0.418 0.41016-0.42584 1e-2380 0.631 0.6233952-0.6386048 1e-5750 TRUE FALSE FALSE TRUE Both 195023 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003228/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 127.236979167838 normal_range exprsweb-egfr-20171017-mw-egfr-ea-lassosum-ukb-20211120 exprsweb-egfr-20171017-mw-egfr-ea-lassosum-ukb-20211120 ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_UKB_20211120 20171017-MW-eGFR-EA eGFR Quantitative UKB UK Biobank lassosum Large GWAS 31152163 http://ckdgen.imbi.uni-freiburg.de/files/Wuttke2019/20171017_MW_eGFR_overall_EA_nstud42.dbgap.txt.gz 456946 9.5e-4023 0.069898624598175 Beta 0.605 0.577168-0.632832 0.605 0.577168-0.632832 0.566 0.546204-0.585796 0.566 0.546204-0.585796 0.517 0.5043384-0.5296616 0.517 0.5043384-0.5296616 0.478 0.4688468-0.4871532 0.478 0.4688468-0.4871532 0.43 0.423728-0.436272 0.43 0.423728-0.436272 0.275 0.2670228-0.2829772 1e-994 0.444 0.43616-0.45184 1e-2680 0.669 0.6614344-0.6765656 1e-6520 TRUE FALSE FALSE TRUE Both 195023 0 GRCh37/hg19 s=0.9;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003224/ScoringFiles/ phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR_20171017-MW-eGFR-EA_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 125.976366204327 normal_range exprsweb-alcohol-amount-20403-pt-mgi-freeze3-20211120 exprsweb-alcohol-amount-20403-pt-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_20403_PT_MGI-Freeze3_20211120 PT ExPRSweb_Alcohol-Amount_20403_PT_MGI-Freeze3_20211120 20403 Amount of alcohol drunk on a typical drinking day Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 19 3.7e-06 0.00209353514524721 Beta 0.0133 -0.105476-0.132076 0.0133 -0.105476-0.132076 0.0681 -0.016376-0.152576 0.0681 -0.016376-0.152576 0.0675 0.013208-0.121792 0.0675 0.013208-0.121792 0.0656 0.026204-0.104996 0.0656 0.026204-0.104996 0.0727 0.04526-0.10014 0.0727 0.04526-0.10014 0.0515 0.018572-0.084428 0.00216 0.0572 0.024272-0.090128 0.000683 0.109 0.075092-0.142908 2.82e-10 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 2.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002826/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_20403_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_20403_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.74888265601608 normal_range exprsweb-alcohol-amount-20403-plink-mgi-freeze3-20211120 exprsweb-alcohol-amount-20403-plink-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_20403_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Alcohol-Amount_20403_PLINK_MGI-Freeze3_20211120 20403 Amount of alcohol drunk on a typical drinking day Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 25 0.031 0.00176686497353615 Beta -0.0592 -0.177976-0.059576 -0.0592 -0.177976-0.059576 -0.00465 -0.089126-0.079826 -0.00465 -0.089126-0.079826 0.0517 -0.002592-0.105992 0.0517 -0.002592-0.105992 0.059 0.019604-0.098396 0.059 0.019604-0.098396 0.0275 0.00006-0.05494 0.0275 0.00006-0.05494 0.053 0.020072-0.085928 0.00163 0.0628 0.029284-0.096316 0.000233 0.0656 0.032084-0.099116 0.00012 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 1.00e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002827/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_20403_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_20403_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.75233968877315 normal_range exprsweb-alcohol-amount-20403-dbslmm-mgi-freeze3-20211120 exprsweb-alcohol-amount-20403-dbslmm-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_20403_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Alcohol-Amount_20403_DBSLMM_MGI-Freeze3_20211120 20403 Amount of alcohol drunk on a typical drinking day Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 5498032 0.012 0.000647265945274348 Beta 0.163 0.044224-0.281776 0.163 0.044224-0.281776 0.112 0.027524-0.196476 0.112 0.027524-0.196476 0.0621 0.007808-0.116392 0.0621 0.007808-0.116392 0.0362 -0.003196-0.075596 0.0362 -0.003196-0.075596 0.0408 0.01336-0.06824 0.0408 0.01336-0.06824 0.0139 -0.019028-0.046828 0.407 0.0412 0.007684-0.074716 0.0161 0.0577 0.023988-0.091412 0.000784 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002828/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_20403_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_20403_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.75200697212059 normal_range exprsweb-alcohol-amount-20403-prscs-mgi-freeze3-20211120 exprsweb-alcohol-amount-20403-prscs-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_20403_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Alcohol-Amount_20403_PRSCS_MGI-Freeze3_20211120 20403 Amount of alcohol drunk on a typical drinking day Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113829 0.14 0.00067817578233487 Beta 0.135 0.016224-0.253776 0.135 0.016224-0.253776 0.127 0.042524-0.211476 0.127 0.042524-0.211476 0.0611 0.006808-0.115392 0.0611 0.006808-0.115392 0.0452 0.005608-0.084792 0.0452 0.005608-0.084792 0.0365 0.00906-0.06394 0.0365 0.00906-0.06394 0.0121 -0.021024-0.045224 0.473 0.00634 -0.02698-0.03966 0.709 0.044 0.010092-0.077908 0.0111 FALSE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002829/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_20403_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_20403_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.75285971422072 normal_range exprsweb-alcohol-amount-20403-lassosum-mgi-freeze3-20211120 exprsweb-alcohol-amount-20403-lassosum-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_20403_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Alcohol-Amount_20403_LASSOSUM_MGI-Freeze3_20211120 20403 Amount of alcohol drunk on a typical drinking day Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 375749 0.0045 0.00163737338089852 Beta 0.00454 -0.114236-0.123316 0.00454 -0.114236-0.123316 -0.000406 -0.084882-0.08407 -0.000406 -0.084882-0.08407 0.018 -0.036292-0.072292 0.018 -0.036292-0.072292 0.0243 -0.015292-0.063892 0.0243 -0.015292-0.063892 0.045 0.01756-0.07244 0.045 0.01756-0.07244 0.0341 0.000976-0.067224 0.0437 0.0505 0.016984-0.084016 0.00307 0.0744 0.040492-0.108308 1.67e-05 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 s=0.9;Lambda=0.01438 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002825/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_20403_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_20403_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.75163418691263 normal_range exprsweb-bmi-21001-irnt-pt-mgi-freeze3-20211120 exprsweb-bmi-21001-irnt-pt-mgi-freeze3-20211120 ExPRSweb_BMI_21001-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_BMI_21001-irnt_PT_MGI-Freeze3_20211120 21001-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 32980 4.1e-467 0.0836198580330477 Beta 0.773 0.682448-0.863552 0.773 0.682448-0.863552 0.721 0.656712-0.785288 0.721 0.656712-0.785288 0.66 0.618644-0.701356 0.66 0.618644-0.701356 0.588 0.558012-0.617988 0.588 0.558012-0.617988 0.518 0.497224-0.538776 0.518 0.497224-0.538776 0.261 0.238852-0.283148 2.12e-118 0.453 0.42948-0.47652 1e-314 0.757 0.730148-0.783852 1e-666 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002841/ScoringFiles/ phewas/ExPRSweb_BMI_21001-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.0846369642683 normal_range 18.5 24.9 exprsweb-bmi-21001-irnt-plink-mgi-freeze3-20211120 exprsweb-bmi-21001-irnt-plink-mgi-freeze3-20211120 ExPRSweb_BMI_21001-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_BMI_21001-irnt_PLINK_MGI-Freeze3_20211120 21001-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 51983 8.1e-395 0.0760082066565434 Beta 0.682 0.591644-0.772356 0.682 0.591644-0.772356 0.694 0.629712-0.758288 0.694 0.629712-0.758288 0.59 0.548644-0.631356 0.59 0.548644-0.631356 0.534 0.503816-0.564184 0.534 0.503816-0.564184 0.471 0.450224-0.491776 0.471 0.450224-0.491776 0.247 0.224656-0.269344 5.03e-104 0.427 0.403088-0.450912 1.05e-270 0.702 0.67554-0.72846 1e-585 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002842/ScoringFiles/ phewas/ExPRSweb_BMI_21001-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.6805394589043 normal_range 18.5 24.9 exprsweb-bmi-21001-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-bmi-21001-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_BMI_21001-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_BMI_21001-irnt_DBSLMM_MGI-Freeze3_20211120 21001-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7444639 2.4e-386 0.0751293742381184 Beta 0.807 0.716644-0.897356 0.807 0.716644-0.897356 0.715 0.650908-0.779092 0.715 0.650908-0.779092 0.638 0.59684-0.67916 0.638 0.59684-0.67916 0.571 0.541208-0.600792 0.571 0.541208-0.600792 0.471 0.45042-0.49158 0.471 0.45042-0.49158 0.246 0.223656-0.268344 1.75e-103 0.405 0.38148-0.42852 1.77e-250 0.692 0.666128-0.717872 1e-598 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002843/ScoringFiles/ phewas/ExPRSweb_BMI_21001-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.7514837676837 normal_range 18.5 24.9 exprsweb-bmi-21001-irnt-prscs-mgi-freeze3-20211120 exprsweb-bmi-21001-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_BMI_21001-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_BMI_21001-irnt_PRSCS_MGI-Freeze3_20211120 21001-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 2.8e-605 0.108871949220906 Beta 0.963 0.872644-1.053356 0.963 0.872644-1.053356 0.889 0.824908-0.953092 0.889 0.824908-0.953092 0.764 0.72284-0.80516 0.764 0.72284-0.80516 0.676 0.646208-0.705792 0.676 0.646208-0.705792 0.586 0.56542-0.60658 0.586 0.56542-0.60658 0.276 0.254636-0.297364 1.24e-142 0.496 0.472872-0.519128 1e-388 0.847 0.820932-0.873068 1e-877 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002844/ScoringFiles/ phewas/ExPRSweb_BMI_21001-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 43.9879387788481 normal_range 18.5 24.9 exprsweb-bmi-21001-irnt-lassosum-mgi-freeze3-20211120 exprsweb-bmi-21001-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_BMI_21001-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_BMI_21001-irnt_LASSOSUM_MGI-Freeze3_20211120 21001-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1062550 2.7e-568 0.103738876637715 Beta 0.971 0.88084-1.06116 0.971 0.88084-1.06116 0.851 0.786908-0.915092 0.851 0.786908-0.915092 0.755 0.714036-0.795964 0.755 0.714036-0.795964 0.678 0.648404-0.707596 0.678 0.648404-0.707596 0.554 0.533616-0.574384 0.554 0.533616-0.574384 0.264 0.242636-0.285364 3.99e-129 0.489 0.466068-0.511932 1e-378 0.808 0.78252-0.83348 1e-838 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002840/ScoringFiles/ phewas/ExPRSweb_BMI_21001-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 44.2762505863417 normal_range 18.5 24.9 exprsweb-bmi-21001-raw-pt-mgi-freeze3-20211120 exprsweb-bmi-21001-raw-pt-mgi-freeze3-20211120 ExPRSweb_BMI_21001-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_BMI_21001-raw_PT_MGI-Freeze3_20211120 21001-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 32526 5.7e-453 0.0861797381448654 Beta 0.806 0.715644-0.896356 0.806 0.715644-0.896356 0.702 0.637712-0.766288 0.702 0.637712-0.766288 0.661 0.619644-0.702356 0.661 0.619644-0.702356 0.592 0.562012-0.621988 0.592 0.562012-0.621988 0.517 0.496224-0.537776 0.517 0.496224-0.537776 0.261 0.239048-0.282952 1.15e-119 0.456 0.432284-0.479716 1e-311 0.763 0.736344-0.789656 1e-680 TRUE FALSE FALSE TRUE Both 23383 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002846/ScoringFiles/ phewas/ExPRSweb_BMI_21001-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 44.5858224387187 normal_range 18.5 24.9 exprsweb-bmi-21001-raw-plink-mgi-freeze3-20211120 exprsweb-bmi-21001-raw-plink-mgi-freeze3-20211120 ExPRSweb_BMI_21001-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_BMI_21001-raw_PLINK_MGI-Freeze3_20211120 21001-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 51370 3e-420 0.0757557095408586 Beta 0.773 0.682448-0.863552 0.773 0.682448-0.863552 0.662 0.597516-0.726484 0.662 0.597516-0.726484 0.614 0.572644-0.655356 0.614 0.572644-0.655356 0.569 0.538816-0.599184 0.569 0.538816-0.599184 0.488 0.467028-0.508972 0.488 0.467028-0.508972 0.247 0.224656-0.269344 1.48e-103 0.428 0.404284-0.451716 9.12e-272 0.717 0.690148-0.743852 1e-597 TRUE FALSE FALSE TRUE Both 23383 0 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002847/ScoringFiles/ phewas/ExPRSweb_BMI_21001-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 44.8512624000696 normal_range 18.5 24.9 exprsweb-bmi-21001-raw-dbslmm-mgi-freeze3-20211120 exprsweb-bmi-21001-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_BMI_21001-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_BMI_21001-raw_DBSLMM_MGI-Freeze3_20211120 21001-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7444629 9.8e-392 0.0747599922935961 Beta 0.803 0.712644-0.893356 0.803 0.712644-0.893356 0.748 0.683908-0.812092 0.748 0.683908-0.812092 0.674 0.63284-0.71516 0.674 0.63284-0.71516 0.576 0.546208-0.605792 0.576 0.546208-0.605792 0.472 0.45142-0.49258 0.472 0.45142-0.49258 0.249 0.226656-0.271344 7.63e-106 0.405 0.38148-0.42852 8.02999999999999e-249 0.695 0.668932-0.721068 1e-596 TRUE FALSE FALSE TRUE Both 23383 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002848/ScoringFiles/ phewas/ExPRSweb_BMI_21001-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.0852385754017 normal_range 18.5 24.9 exprsweb-bmi-21001-raw-prscs-mgi-freeze3-20211120 exprsweb-bmi-21001-raw-prscs-mgi-freeze3-20211120 ExPRSweb_BMI_21001-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_BMI_21001-raw_PRSCS_MGI-Freeze3_20211120 21001-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 5.3e-607 0.107527658051958 Beta 0.931 0.840644-1.021356 0.931 0.840644-1.021356 0.881 0.816712-0.945288 0.881 0.816712-0.945288 0.746 0.70484-0.78716 0.746 0.70484-0.78716 0.663 0.633012-0.692988 0.663 0.633012-0.692988 0.592 0.57142-0.61258 0.592 0.57142-0.61258 0.272 0.250636-0.293364 2.11e-136 0.493 0.469872-0.516128 1e-382 0.852 0.825736-0.878264 1e-874 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002849/ScoringFiles/ phewas/ExPRSweb_BMI_21001-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 43.974583659416 normal_range 18.5 24.9 exprsweb-bmi-21001-raw-lassosum-mgi-freeze3-20211120 exprsweb-bmi-21001-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_BMI_21001-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_BMI_21001-raw_LASSOSUM_MGI-Freeze3_20211120 21001-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1052511 1e-566 0.103724761043297 Beta 0.985 0.89484-1.07516 0.985 0.89484-1.07516 0.842 0.777908-0.906092 0.842 0.777908-0.906092 0.765 0.724036-0.805964 0.765 0.724036-0.805964 0.669 0.639404-0.698596 0.669 0.639404-0.698596 0.561 0.540616-0.581384 0.561 0.540616-0.581384 0.269 0.247636-0.290364 2.2e-134 0.485 0.462068-0.507932 1e-375 0.818 0.792324-0.843676 1e-849 TRUE FALSE FALSE TRUE Both 23383 0 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002845/ScoringFiles/ phewas/ExPRSweb_BMI_21001-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_21001-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 43.6868310655574 normal_range 18.5 24.9 exprsweb-bmi-23104-irnt-pt-mgi-freeze3-20211120 exprsweb-bmi-23104-irnt-pt-mgi-freeze3-20211120 ExPRSweb_BMI_23104-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_BMI_23104-irnt_PT_MGI-Freeze3_20211120 23104-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 32697 3.9e-468 0.0823401985217282 Beta 0.813 0.722644-0.903356 0.813 0.722644-0.903356 0.748 0.683712-0.812288 0.748 0.683712-0.812288 0.665 0.623644-0.706356 0.665 0.623644-0.706356 0.6 0.570012-0.629988 0.6 0.570012-0.629988 0.507 0.486028-0.527972 0.507 0.486028-0.527972 0.259 0.236852-0.281148 1.26e-116 0.457 0.433284-0.480716 1e-311 0.751 0.723952-0.778048 1e-643 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002851/ScoringFiles/ phewas/ExPRSweb_BMI_23104-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.0763121186043 normal_range 18.5 24.9 exprsweb-bmi-23104-irnt-plink-mgi-freeze3-20211120 exprsweb-bmi-23104-irnt-plink-mgi-freeze3-20211120 ExPRSweb_BMI_23104-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_BMI_23104-irnt_PLINK_MGI-Freeze3_20211120 23104-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 51563 3e-403 0.0747757433663699 Beta 0.759 0.668644-0.849356 0.759 0.668644-0.849356 0.687 0.622712-0.751288 0.687 0.622712-0.751288 0.61 0.568644-0.651356 0.61 0.568644-0.651356 0.56 0.530012-0.589988 0.56 0.530012-0.589988 0.466 0.445028-0.486972 0.466 0.445028-0.486972 0.257 0.234656-0.279344 7.02e-113 0.431 0.407088-0.454912 1.95e-274 0.701 0.67454-0.72746 1e-585 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 1.26e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002852/ScoringFiles/ phewas/ExPRSweb_BMI_23104-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.6102076214365 normal_range 18.5 24.9 exprsweb-bmi-23104-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-bmi-23104-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_BMI_23104-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_BMI_23104-irnt_DBSLMM_MGI-Freeze3_20211120 23104-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7446664 6.6e-379 0.0736703815439853 Beta 0.797 0.706644-0.887356 0.797 0.706644-0.887356 0.726 0.661908-0.790092 0.726 0.661908-0.790092 0.63 0.58884-0.67116 0.63 0.58884-0.67116 0.568 0.538208-0.597792 0.568 0.538208-0.597792 0.477 0.45642-0.49758 0.477 0.45642-0.49758 0.243 0.22046-0.26554 9.04e-100 0.393 0.369676-0.416324 4.44e-238 0.692 0.665932-0.718068 1e-586 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002853/ScoringFiles/ phewas/ExPRSweb_BMI_23104-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.8137902772009 normal_range 18.5 24.9 exprsweb-bmi-23104-irnt-prscs-mgi-freeze3-20211120 exprsweb-bmi-23104-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_BMI_23104-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_BMI_23104-irnt_PRSCS_MGI-Freeze3_20211120 23104-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 4e-595 0.108261945837325 Beta 0.974 0.88384-1.06416 0.974 0.88384-1.06416 0.886 0.821908-0.950092 0.886 0.821908-0.950092 0.753 0.71184-0.79416 0.753 0.71184-0.79416 0.671 0.641208-0.700792 0.671 0.641208-0.700792 0.593 0.57242-0.61358 0.593 0.57242-0.61358 0.261 0.239636-0.282364 1.87e-126 0.478 0.454872-0.501128 1e-360 0.843 0.816736-0.869264 1e-865 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002854/ScoringFiles/ phewas/ExPRSweb_BMI_23104-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 44.0667511516142 normal_range 18.5 24.9 exprsweb-bmi-23104-irnt-lassosum-mgi-freeze3-20211120 exprsweb-bmi-23104-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_BMI_23104-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_BMI_23104-irnt_LASSOSUM_MGI-Freeze3_20211120 23104-irnt Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1053861 2e-563 0.102937910219478 Beta 0.951 0.86084-1.04116 0.951 0.86084-1.04116 0.837 0.772908-0.901092 0.837 0.772908-0.901092 0.765 0.724036-0.805964 0.765 0.724036-0.805964 0.658 0.628404-0.687596 0.658 0.628404-0.687596 0.554 0.533616-0.574384 0.554 0.533616-0.574384 0.262 0.240636-0.283364 5.88e-127 0.481 0.458068-0.503932 1e-370 0.805 0.779324-0.830676 1e-829 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002850/ScoringFiles/ phewas/ExPRSweb_BMI_23104-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 44.3145170243924 normal_range 18.5 24.9 exprsweb-bmi-23104-raw-pt-mgi-freeze3-20211120 exprsweb-bmi-23104-raw-pt-mgi-freeze3-20211120 ExPRSweb_BMI_23104-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_BMI_23104-raw_PT_MGI-Freeze3_20211120 23104-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 28689 2e-462 0.0858125844892273 Beta 0.763 0.672448-0.853552 0.763 0.672448-0.853552 0.758 0.693712-0.822288 0.758 0.693712-0.822288 0.659 0.617644-0.700356 0.659 0.617644-0.700356 0.586 0.555816-0.616184 0.586 0.555816-0.616184 0.517 0.496224-0.537776 0.517 0.496224-0.537776 0.28 0.257852-0.302148 8.96e-136 0.445 0.42148-0.46852 2.26e-301 0.768 0.741344-0.794656 1e-691 TRUE FALSE FALSE TRUE Both 23381 0 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002856/ScoringFiles/ phewas/ExPRSweb_BMI_23104-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.903656587963055 normal_range 18.5 24.9 exprsweb-bmi-23104-raw-plink-mgi-freeze3-20211120 exprsweb-bmi-23104-raw-plink-mgi-freeze3-20211120 ExPRSweb_BMI_23104-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_BMI_23104-raw_PLINK_MGI-Freeze3_20211120 23104-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 44240 5.2e-401 0.0777215802102424 Beta 0.785 0.694644-0.875356 0.785 0.694644-0.875356 0.686 0.621712-0.750288 0.686 0.621712-0.750288 0.618 0.576644-0.659356 0.618 0.576644-0.659356 0.548 0.517816-0.578184 0.548 0.517816-0.578184 0.464 0.443028-0.484972 0.464 0.443028-0.484972 0.248 0.225656-0.270344 1.45e-105 0.439 0.415088-0.462912 4.47e-285 0.7 0.673344-0.726656 1e-578 TRUE FALSE FALSE TRUE Both 23381 0 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002857/ScoringFiles/ phewas/ExPRSweb_BMI_23104-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.913791493013428 normal_range 18.5 24.9 exprsweb-bmi-23104-raw-dbslmm-mgi-freeze3-20211120 exprsweb-bmi-23104-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_BMI_23104-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_BMI_23104-raw_DBSLMM_MGI-Freeze3_20211120 23104-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7446652 3.2e-395 0.0707451889589881 Beta 0.813 0.722644-0.903356 0.813 0.722644-0.903356 0.734 0.669908-0.798092 0.734 0.669908-0.798092 0.646 0.60484-0.68716 0.646 0.60484-0.68716 0.555 0.525208-0.584792 0.555 0.525208-0.584792 0.464 0.443224-0.484776 0.464 0.443224-0.484776 0.24 0.217656-0.262344 6.24e-98 0.4 0.376284-0.423716 2.3e-240 0.682 0.655736-0.708264 1e-568 TRUE FALSE FALSE TRUE Both 23381 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002858/ScoringFiles/ phewas/ExPRSweb_BMI_23104-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.914758744040441 normal_range 18.5 24.9 exprsweb-bmi-23104-raw-prscs-mgi-freeze3-20211120 exprsweb-bmi-23104-raw-prscs-mgi-freeze3-20211120 ExPRSweb_BMI_23104-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_BMI_23104-raw_PRSCS_MGI-Freeze3_20211120 23104-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 1.9e-603 0.108501494207428 Beta 0.958 0.867644-1.048356 0.958 0.867644-1.048356 0.89 0.825908-0.954092 0.89 0.825908-0.954092 0.761 0.71984-0.80216 0.761 0.71984-0.80216 0.675 0.645208-0.704792 0.675 0.645208-0.704792 0.594 0.57342-0.61458 0.594 0.57342-0.61458 0.267 0.245832-0.288168 4.77e-134 0.498 0.474872-0.521128 1e-390 0.857 0.830736-0.883264 1e-886 TRUE FALSE FALSE TRUE Both 23382 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002859/ScoringFiles/ phewas/ExPRSweb_BMI_23104-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 44.0021127765113 normal_range 18.5 24.9 exprsweb-bmi-23104-raw-lassosum-mgi-freeze3-20211120 exprsweb-bmi-23104-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_BMI_23104-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_BMI_23104-raw_LASSOSUM_MGI-Freeze3_20211120 23104-raw Body mass index Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1044654 6.4e-575 0.102975690619167 Beta 0.943 0.85284-1.03316 0.943 0.85284-1.03316 0.842 0.777908-0.906092 0.842 0.777908-0.906092 0.747 0.706036-0.787964 0.747 0.706036-0.787964 0.678 0.648404-0.707596 0.678 0.648404-0.707596 0.559 0.538616-0.579384 0.559 0.538616-0.579384 0.266 0.244636-0.287364 2.54e-130 0.483 0.460264-0.505736 1e-376 0.814 0.788324-0.839676 1e-843 TRUE FALSE FALSE TRUE Both 23381 0 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002855/ScoringFiles/ phewas/ExPRSweb_BMI_23104-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_BMI_23104-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.88566215286831 normal_range 18.5 24.9 exprsweb-t2d-2443-pt-mgi-freeze3-20211120 exprsweb-t2d-2443-pt-mgi-freeze3-20211120 ExPRSweb_T2D_2443_PT_MGI-Freeze3_20211120 PT ExPRSweb_T2D_2443_PT_MGI-Freeze3_20211120 2443 Diabetes diagnosed by doctor Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1888 9.4e-77 0.0299005 0.143 0.599 0.582-0.615 OR 2.31 1.85-2.88 2.31 1.85-2.88 2.11 1.8-2.48 2.11 1.8-2.48 1.91 1.72-2.12 1.91 1.72-2.12 1.87 1.73-2.03 1.87 1.73-2.03 1.81 1.71-1.92 1.81 1.71-1.92 1.33 1.23-1.44 1.85e-12 1.71 1.58-1.84 6.51e-41 2.4 2.22-2.59 1.34e-110 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 3.98e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003090/ScoringFiles/ phewas/ExPRSweb_T2D_2443_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_2443_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.142519651193176 binary_exposure exprsweb-t2d-2443-plink-mgi-freeze3-20211120 exprsweb-t2d-2443-plink-mgi-freeze3-20211120 ExPRSweb_T2D_2443_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_T2D_2443_PLINK_MGI-Freeze3_20211120 2443 Diabetes diagnosed by doctor Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2707 6.3e-65 0.0254891 0.143 0.591 0.574-0.606 OR 1.92 1.53-2.41 1.92 1.53-2.41 1.97 1.67-2.32 1.97 1.67-2.32 1.86 1.67-2.06 1.86 1.67-2.06 1.75 1.62-1.89 1.75 1.62-1.89 1.65 1.56-1.75 1.65 1.56-1.75 1.33 1.23-1.44 2.57e-12 1.72 1.59-1.86 3.48e-43 2.25 2.08-2.42 6.2e-96 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 3.98e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003091/ScoringFiles/ phewas/ExPRSweb_T2D_2443_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_2443_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.142943044919927 binary_exposure exprsweb-t2d-2443-dbslmm-mgi-freeze3-20211120 exprsweb-t2d-2443-dbslmm-mgi-freeze3-20211120 ExPRSweb_T2D_2443_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_T2D_2443_DBSLMM_MGI-Freeze3_20211120 2443 Diabetes diagnosed by doctor Binary Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10304000 7.7e-40 0.016524 0.144 0.563 0.546-0.58 OR 1.41 1.12-1.78 1.41 1.12-1.78 1.42 1.21-1.68 1.42 1.21-1.68 1.65 1.48-1.83 1.65 1.48-1.83 1.73 1.6-1.87 1.73 1.6-1.87 1.55 1.47-1.64 1.55 1.47-1.64 1.36 1.26-1.46 7.64e-15 1.53 1.41-1.65 1.06e-27 1.96 1.82-2.11 3.23e-71 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003092/ScoringFiles/ phewas/ExPRSweb_T2D_2443_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_2443_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.143879557805104 binary_exposure exprsweb-t2d-2443-prscs-mgi-freeze3-20211120 exprsweb-t2d-2443-prscs-mgi-freeze3-20211120 ExPRSweb_T2D_2443_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_T2D_2443_PRSCS_MGI-Freeze3_20211120 2443 Diabetes diagnosed by doctor Binary Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 1.4e-123 0.0454224 0.141 0.625 0.608-0.639 OR 2.59 2.08-3.22 2.59 2.08-3.22 2.56 2.18-3 2.56 2.18-3 2.44 2.2-2.71 2.44 2.2-2.71 2.22 2.05-2.4 2.22 2.05-2.4 2.1 1.98-2.22 2.1 1.98-2.22 1.53 1.41-1.66 1.18e-23 2.13 1.96-2.3 1.48e-74 3.11 2.87-3.37 3.79e-168 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003093/ScoringFiles/ phewas/ExPRSweb_T2D_2443_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_2443_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.140632081179746 binary_exposure exprsweb-t2d-2443-lassosum-mgi-freeze3-20211120 exprsweb-t2d-2443-lassosum-mgi-freeze3-20211120 ExPRSweb_T2D_2443_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_T2D_2443_LASSOSUM_MGI-Freeze3_20211120 2443 Diabetes diagnosed by doctor Binary Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 488969 9.2e-108 0.0401463 0.141 0.616 0.6-0.63 OR 2.64 2.13-3.28 2.64 2.13-3.28 2.78 2.38-3.25 2.78 2.38-3.25 2.34 2.11-2.6 2.34 2.11-2.6 2.11 1.95-2.27 2.11 1.95-2.27 1.99 1.88-2.1 1.99 1.88-2.1 1.55 1.42-1.68 2.12e-25 1.99 1.84-2.16 6.77e-64 2.92 2.7-3.16 5.73e-158 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003089/ScoringFiles/ phewas/ExPRSweb_T2D_2443_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_2443_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.141345550933343 binary_exposure exprsweb-c-reactive-protein-28887542-gcst004941-pt-mgi-freeze3-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-pt-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_MGI-Freeze3_20211120 PT ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_MGI-Freeze3_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 414578 0.33 0.000744167218347905 Beta 0.0979 -0.095748-0.291548 0.0979 -0.095748-0.291548 0.0358 -0.101792-0.173392 0.0358 -0.101792-0.173392 0.0295 -0.059092-0.118092 0.0295 -0.059092-0.118092 0.0339 -0.030584-0.098384 0.0339 -0.030584-0.098384 0.0137 -0.03138-0.05878 0.0137 -0.03138-0.05878 -0.0125 -0.070124-0.045124 0.672 -0.0123 -0.070512-0.045912 0.678 0.000303 -0.058693-0.059299 0.992 FALSE TRUE FALSE TRUE Both 5147 0 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002861/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.597719629993951 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-plink-mgi-freeze3-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-plink-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_MGI-Freeze3_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 407315 0.43 0.000833632242535582 Beta 0.126 -0.067648-0.319648 0.126 -0.067648-0.319648 0.0319 -0.105692-0.169492 0.0319 -0.105692-0.169492 0.0176 -0.070992-0.106192 0.0176 -0.070992-0.106192 0.0219 -0.042584-0.086384 0.0219 -0.042584-0.086384 0.0264 -0.01868-0.07148 0.0264 -0.01868-0.07148 0.00664 -0.050984-0.064264 0.821 -0.0161 -0.073332-0.041132 0.581 0.0168 -0.042-0.0756 0.575 FALSE TRUE FALSE TRUE Both 5147 0 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002862/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.597756414608916 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-prscs-mgi-freeze3-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-prscs-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_MGI-Freeze3_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 1118117 0.39 6.71160751901595e-06 Beta -0.0677 -0.261544-0.126144 -0.0677 -0.261544-0.126144 0.0264 -0.111388-0.164188 0.0264 -0.111388-0.164188 -0.0489 -0.137492-0.039692 -0.0489 -0.137492-0.039692 -0.0282 -0.092684-0.036284 -0.0282 -0.092684-0.036284 -0.0205 -0.065384-0.024384 -0.0205 -0.065384-0.024384 0.00637 -0.048118-0.060858 0.819 0.000225 -0.055047-0.055497 0.994 -0.0166 -0.072264-0.039064 0.56 FALSE TRUE FALSE TRUE Both 5147 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002863/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.597743323650452 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-lassosum-mgi-freeze3-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-lassosum-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_MGI-Freeze3_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 579046 0.7 0.000316648264563682 Beta -0.0512 -0.245044-0.142644 -0.0512 -0.245044-0.142644 -0.00176 -0.139548-0.136028 -0.00176 -0.139548-0.136028 -0.00278 -0.091372-0.085812 -0.00278 -0.091372-0.085812 0.00311 -0.061374-0.067594 0.00311 -0.061374-0.067594 -0.00683 -0.051714-0.038054 -0.00683 -0.051714-0.038054 -0.0023 -0.057572-0.052972 0.935 -0.00415 -0.060206-0.051906 0.885 -0.0231 -0.079352-0.033152 0.421 FALSE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 s=0.2;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002860/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.597813205974331 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-pt-ukb-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-pt-ukb-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_UKB_20211120 PT ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_UKB_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank C+T (DS) Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 2 0.0053 3.66578632802765e-05 Beta 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 0.00838 0.0019904-0.0147696 TRUE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 5.01e-16 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002880/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PT_UKB_20211120/exclusion.tsv 2021-01-10 18.9274877718369 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-plink-ukb-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-plink-ukb-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_UKB_20211120 PLINK ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_UKB_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank C+T (GT) Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 2 0.034 4.80059648756314e-05 Beta 0.00203 -0.0116116-0.0156716 0.00203 -0.0116116-0.0156716 0.00203 -0.0116116-0.0156716 0.00203 -0.0116116-0.0156716 0.00203 -0.0116116-0.0156716 0.00203 -0.0116116-0.0156716 0.00964 -0.0007872-0.0200672 0.00964 -0.0007872-0.0200672 0.00434 -0.0024808-0.0111608 0.00434 -0.0024808-0.0111608 0.00737 -0.001548-0.016288 0.105 0.00535 -0.0023136-0.0130136 0.171 0.0134 0.0029728-0.0238272 0.0119 TRUE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 6.31e-09 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002881/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 18.9278058750588 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-dbslmm-ukb-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-dbslmm-ukb-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_C-reactive-protein_28887542-GCST004941_DBSLMM_UKB_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank DBSLMM Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 746 0.26 1.20076431566858e-07 Beta 0.00801 -0.023546-0.039566 0.00801 -0.023546-0.039566 -0.00365 -0.025994-0.018694 -0.00365 -0.025994-0.018694 -0.00748 -0.0218468-0.0068868 -0.00748 -0.0218468-0.0068868 -0.00388 -0.0143268-0.0065668 -0.00388 -0.0143268-0.0065668 -0.00193 -0.0091624-0.0053024 -0.00193 -0.0091624-0.0053024 0.00345 -0.0054288-0.0123288 0.446 0.00194 -0.0068996-0.0107796 0.667 -0.000101 -0.008921-0.008719 0.982 FALSE TRUE FALSE TRUE Both 194718 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002882/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 18.9281189250096 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-prscs-ukb-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-prscs-ukb-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_UKB_20211120 PRSCS ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_UKB_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank PRS-CS Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 1119064 0.67 8.67378473973291e-08 Beta -0.0055 -0.037056-0.026056 -0.0055 -0.037056-0.026056 0.00965 -0.012694-0.031994 0.00965 -0.012694-0.031994 6.45e-05 -0.0143219-0.0144509 6.45e-05 -0.0143219-0.0144509 -0.00237 -0.0128168-0.0080768 -0.00237 -0.0128168-0.0080768 -0.00288 -0.0101124-0.0043524 -0.00288 -0.0101124-0.0043524 0.000117 -0.0086638-0.0088978 0.979 0.00472 -0.0041588-0.0135988 0.297 -0.00106 -0.0099388-0.0078188 0.814 FALSE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002883/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 18.9282242805023 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-28887542-gcst004941-lassosum-ukb-20211120 exprsweb-c-reactive-protein-28887542-gcst004941-lassosum-ukb-20211120 ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_UKB_20211120 28887542-GCST004941 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank lassosum Large GWAS 28887542 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/PrinsBP_28887542_GCST004941/harmonised/28887542-GCST004941-EFO_0007001-build37.f.tsv.gz 721243 0.11 6.60161498157466e-05 Beta 0.0237 -0.007856-0.055256 0.0237 -0.007856-0.055256 0.0294 0.007056-0.051744 0.0294 0.007056-0.051744 0.0141 -0.0002668-0.0284668 0.0141 -0.0002668-0.0284668 0.00588 -0.0045668-0.0163268 0.00588 -0.0045668-0.0163268 0.00563 -0.0016024-0.0128624 0.00563 -0.0016024-0.0128624 0.00189 -0.00693-0.01071 0.675 0.013 0.0041016-0.0218984 0.00413 0.0105 0.0016604-0.0193396 0.0196 FALSE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 s=1;Lambda=0.04833 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002879/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_28887542-GCST004941_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 18.9279953639963 normal_range 0.01 0.3 mg/dl exprsweb-vitamin-d-29343764-gcst005367-pt-mgi-freeze3-20211120 exprsweb-vitamin-d-29343764-gcst005367-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-D_29343764-GCST005367_PT_MGI-Freeze3_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 16 2.4e-25 0.0144337322428648 Beta 0.377 0.213928-0.540072 0.377 0.213928-0.540072 0.36 0.244164-0.475836 0.36 0.244164-0.475836 0.289 0.21452-0.36348 0.289 0.21452-0.36348 0.208 0.153904-0.262096 0.208 0.153904-0.262096 0.195 0.157564-0.232436 0.195 0.157564-0.232436 0.135 0.090116-0.179884 3.23e-09 0.198 0.152724-0.243276 8.55e-18 0.306 0.26092-0.35108 1.75e-40 TRUE FALSE FALSE TRUE Both 6926 0 hg38 6.31e-14 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003185/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.8798874759552 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-plink-mgi-freeze3-20211120 exprsweb-vitamin-d-29343764-gcst005367-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_MGI-Freeze3_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 15 2e-24 0.0148536149150791 Beta 0.342 0.178928-0.505072 0.342 0.178928-0.505072 0.341 0.225164-0.456836 0.341 0.225164-0.456836 0.278 0.20352-0.35248 0.278 0.20352-0.35248 0.198 0.143904-0.252096 0.198 0.143904-0.252096 0.194 0.156564-0.231436 0.194 0.156564-0.231436 0.101 0.056312-0.145688 9.57e-06 0.197 0.151332-0.242668 2.78e-17 0.294 0.248724-0.339276 3.09e-37 TRUE FALSE FALSE TRUE Both 6926 0 hg38 6.31e-14 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003186/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.9277413519465 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-d-29343764-gcst005367-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_MGI-Freeze3_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 98135 0.87 4.95195181247323e-08 Beta -0.112 -0.275268-0.051268 -0.112 -0.275268-0.051268 -0.115 -0.231032-0.001032 -0.115 -0.231032-0.001032 0.00451 -0.070166-0.079186 0.00451 -0.070166-0.079186 0.000434 -0.053858-0.054726 0.000434 -0.053858-0.054726 0.00788 -0.029752-0.045512 0.00788 -0.029752-0.045512 -0.0237 -0.069956-0.022556 0.315 -0.0191 -0.06516-0.02696 0.415 -0.00638 -0.052244-0.039484 0.785 FALSE TRUE FALSE TRUE Both 6926 0 hg38 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003187/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 81.1298102030465 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-prscs-mgi-freeze3-20211120 exprsweb-vitamin-d-29343764-gcst005367-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_MGI-Freeze3_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 1058027 3.5e-24 0.0141529908869426 Beta 0.194 0.030536-0.357464 0.194 0.030536-0.357464 0.22 0.103772-0.336228 0.22 0.103772-0.336228 0.238 0.163128-0.312872 0.238 0.163128-0.312872 0.217 0.162512-0.271488 0.217 0.162512-0.271488 0.221 0.182976-0.259024 0.221 0.182976-0.259024 0.118 0.072332-0.163668 4.29e-07 0.18 0.13296-0.22704 5.92e-14 0.316 0.267784-0.364216 1.32e-37 TRUE FALSE FALSE TRUE Both 6926 0 hg38 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003188/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.9400465096751 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-d-29343764-gcst005367-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_MGI-Freeze3_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 108547 5.5e-38 0.0194802143257594 Beta 0.355 0.191928-0.518072 0.355 0.191928-0.518072 0.323 0.207164-0.438836 0.323 0.207164-0.438836 0.276 0.20152-0.35048 0.276 0.20152-0.35048 0.267 0.212904-0.321096 0.267 0.212904-0.321096 0.213 0.175564-0.250436 0.213 0.175564-0.250436 0.141 0.096704-0.185296 4.52e-10 0.267 0.222508-0.311492 4.35e-32 0.348 0.302136-0.393864 2.87e-50 TRUE FALSE FALSE TRUE Both 6926 0 hg38 s=0.9;Lambda=0.01129 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003184/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.2278650328757 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-pt-ukb-20211120 exprsweb-vitamin-d-29343764-gcst005367-pt-ukb-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_PT_UKB_20211120 PT ExPRSweb_Vitamin-D_29343764-GCST005367_PT_UKB_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml UKB UK Biobank C+T (DS) Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 23 7.7e-1017 0.0233548721644401 Beta 0.35 0.317856-0.382144 0.35 0.317856-0.382144 0.317 0.294264-0.339736 0.317 0.294264-0.339736 0.305 0.2903588-0.3196412 0.305 0.2903588-0.3196412 0.277 0.2663768-0.2876232 0.277 0.2663768-0.2876232 0.254 0.2466696-0.2613304 0.254 0.2466696-0.2613304 0.157 0.1485524-0.1654476 1.22e-291 0.264 0.2553368-0.2726632 1e-776 0.394 0.3850428-0.4029572 1e-1620 TRUE FALSE FALSE TRUE Both 186680 0 hg38 1.26e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003200/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PT_UKB_20211120/exclusion.tsv 2021-01-10 422.955234007527 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-plink-ukb-20211120 exprsweb-vitamin-d-29343764-gcst005367-plink-ukb-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_UKB_20211120 PLINK ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_UKB_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml UKB UK Biobank C+T (GT) Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 22 1.2e-1008 0.0233332035792013 Beta 0.362 0.329856-0.394144 0.362 0.329856-0.394144 0.329 0.306264-0.351736 0.329 0.306264-0.351736 0.301 0.2863588-0.3156412 0.301 0.2863588-0.3156412 0.28 0.2693768-0.2906232 0.28 0.2693768-0.2906232 0.256 0.2486696-0.2633304 0.256 0.2486696-0.2633304 0.158 0.1495524-0.1664476 1.54e-292 0.261 0.2523368-0.2696632 1e-761 0.396 0.3870428-0.4049572 1e-1630 TRUE FALSE FALSE TRUE Both 186680 0 hg38 1.26e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003201/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 423.038493595675 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-dbslmm-ukb-20211120 exprsweb-vitamin-d-29343764-gcst005367-dbslmm-ukb-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_UKB_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml UKB UK Biobank DBSLMM Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 805427 6.4e-13 0.00043521703156644 Beta -0.0877 -0.119844--0.055556 -0.0877 -0.119844--0.055556 -0.0678 -0.090732--0.044868 -0.0678 -0.090732--0.044868 -0.0611 -0.0757608--0.0464392 -0.0611 -0.0757608--0.0464392 -0.0512 -0.0618624--0.0405376 -0.0512 -0.0618624--0.0405376 -0.047 -0.0543892--0.0396108 -0.047 -0.0543892--0.0396108 0.00162 -0.0074744-0.0107144 0.727 -0.00824 -0.0173148-0.0008348 0.0752 -0.0489 -0.0579356--0.0398644 3.04e-26 TRUE TRUE FALSE TRUE Both 186680 0 hg38 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003202/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 433.417406534747 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-prscs-ukb-20211120 exprsweb-vitamin-d-29343764-gcst005367-prscs-ukb-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_UKB_20211120 PRSCS ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_UKB_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml UKB UK Biobank PRS-CS Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 1058756 4.2e-1051 0.0256149788061342 Beta 0.39 0.357856-0.422144 0.39 0.357856-0.422144 0.359 0.336264-0.381736 0.359 0.336264-0.381736 0.324 0.3093588-0.3386412 0.324 0.3093588-0.3386412 0.288 0.2773768-0.2986232 0.288 0.2773768-0.2986232 0.259 0.25165-0.26635 0.259 0.25165-0.26635 0.157 0.148474-0.165526 1.02e-283 0.266 0.2572388-0.2747612 1e-770 0.401 0.3920232-0.4099768 1e-1660 TRUE FALSE FALSE TRUE Both 186680 0 hg38 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003203/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 422.606795766519 normal_range 20 50 ng/ml exprsweb-vitamin-d-29343764-gcst005367-lassosum-ukb-20211120 exprsweb-vitamin-d-29343764-gcst005367-lassosum-ukb-20211120 ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_UKB_20211120 29343764-GCST005367 Vitamin_D Quantitative Range unit: ng/ml UKB UK Biobank lassosum Large GWAS 29343764 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/JiangX_29343764_GCST005367/harmonised/29343764-GCST005367-EFO_0004631.h.tsv.gz 109290 3.3e-1114 0.0251024455722818 Beta 0.364 0.331856-0.396144 0.364 0.331856-0.396144 0.335 0.312264-0.357736 0.335 0.312264-0.357736 0.318 0.3033588-0.3326412 0.318 0.3033588-0.3326412 0.294 0.2833768-0.3046232 0.294 0.2833768-0.3046232 0.267 0.2596696-0.2743304 0.267 0.2596696-0.2743304 0.166 0.1576112-0.1743888 1e-328 0.27 0.2613956-0.2786044 1e-827 0.412 0.4030428-0.4209572 1e-1770 TRUE FALSE FALSE TRUE Both 186680 0 hg38 s=0.9;Lambda=0.01129 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003199/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_29343764-GCST005367_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 421.966517083809 normal_range 20 50 ng/ml exprsweb-t2d-29358691-gcst005413-pt-mgi-freeze3-20211120 exprsweb-t2d-29358691-gcst005413-pt-mgi-freeze3-20211120 ExPRSweb_T2D_29358691-GCST005413_PT_MGI-Freeze3_20211120 PT ExPRSweb_T2D_29358691-GCST005413_PT_MGI-Freeze3_20211120 29358691-GCST005413 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 45 2.4e-32 0.0168839 0.144 0.562 0.546-0.578 OR 2.15 1.72-2.67 2.15 1.72-2.67 1.85 1.57-2.17 1.85 1.57-2.17 1.65 1.48-1.83 1.65 1.48-1.83 1.58 1.46-1.71 1.58 1.46-1.71 1.44 1.37-1.53 1.44 1.37-1.53 1.22 1.13-1.32 2.15e-07 1.46 1.35-1.57 4.77e-23 1.76 1.63-1.89 1.19e-52 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 3.98e-07 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003095/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.144165247844208 binary_exposure exprsweb-t2d-29358691-gcst005413-plink-mgi-freeze3-20211120 exprsweb-t2d-29358691-gcst005413-plink-mgi-freeze3-20211120 ExPRSweb_T2D_29358691-GCST005413_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_T2D_29358691-GCST005413_PLINK_MGI-Freeze3_20211120 29358691-GCST005413 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 46 1.1e-30 0.0169082 0.144 0.56 0.545-0.576 OR 2.19 1.76-2.72 2.19 1.76-2.72 1.89 1.61-2.21 1.89 1.61-2.21 1.68 1.51-1.87 1.68 1.51-1.87 1.61 1.49-1.73 1.61 1.49-1.73 1.44 1.36-1.52 1.44 1.36-1.52 1.19 1.1-1.29 5.62e-06 1.45 1.34-1.56 1.33e-22 1.72 1.6-1.85 4.36e-49 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 7.94e-07 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003096/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.144228697881523 binary_exposure exprsweb-t2d-29358691-gcst005413-dbslmm-mgi-freeze3-20211120 exprsweb-t2d-29358691-gcst005413-dbslmm-mgi-freeze3-20211120 ExPRSweb_T2D_29358691-GCST005413_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_T2D_29358691-GCST005413_DBSLMM_MGI-Freeze3_20211120 29358691-GCST005413 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 229 0.54 0.000130932 0.145 0.5 0.484-0.517 OR 1.06 0.826-1.35 1.06 0.826-1.35 0.909 0.758-1.09 0.909 0.758-1.09 0.96 0.856-1.08 0.96 0.856-1.08 0.985 0.907-1.07 0.985 0.907-1.07 0.986 0.93-1.04 0.986 0.93-1.04 1.03 0.959-1.1 0.418 1 0.934-1.08 0.945 0.998 0.929-1.07 0.948 FALSE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003097/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.145261692351382 binary_exposure exprsweb-t2d-29358691-gcst005413-prscs-mgi-freeze3-20211120 exprsweb-t2d-29358691-gcst005413-prscs-mgi-freeze3-20211120 ExPRSweb_T2D_29358691-GCST005413_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_T2D_29358691-GCST005413_PRSCS_MGI-Freeze3_20211120 29358691-GCST005413 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 1116101 1.8e-62 0.0222516 0.143 0.593 0.577-0.608 OR 2.32 1.87-2.89 2.32 1.87-2.89 2.14 1.83-2.51 2.14 1.83-2.51 1.98 1.79-2.19 1.98 1.79-2.19 1.87 1.73-2.01 1.87 1.73-2.01 1.63 1.54-1.72 1.63 1.54-1.72 1.36 1.26-1.47 1.06e-14 1.62 1.5-1.75 3.53e-35 2.16 2.01-2.33 2.3e-93 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003098/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.142899298034846 binary_exposure exprsweb-t2d-29358691-gcst005413-lassosum-mgi-freeze3-20211120 exprsweb-t2d-29358691-gcst005413-lassosum-mgi-freeze3-20211120 ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_MGI-Freeze3_20211120 29358691-GCST005413 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 266890 4e-55 0.0227739 0.143 0.589 0.572-0.604 OR 2.54 2.04-3.16 2.54 2.04-3.16 2.17 1.86-2.54 2.17 1.86-2.54 1.92 1.73-2.13 1.92 1.73-2.13 1.7 1.57-1.84 1.7 1.57-1.84 1.65 1.56-1.75 1.65 1.56-1.75 1.33 1.23-1.44 5.19e-13 1.57 1.46-1.7 7.23e-32 2.13 1.98-2.29 9.43e-90 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 s=0.9;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003094/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.143162360717683 binary_exposure exprsweb-t2d-29358691-gcst005413-pt-ukb-20211120 exprsweb-t2d-29358691-gcst005413-pt-ukb-20211120 ExPRSweb_T2D_29358691-GCST005413_PT_UKB_20211120 PT ExPRSweb_T2D_29358691-GCST005413_PT_UKB_20211120 29358691-GCST005413 T2D Binary Binary UKB UK Biobank C+T (DS) Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 118 1.9e-239 0.0164324 0.0449 0.594 0.588-0.6 OR 2.45 2.22-2.71 2.45 2.22-2.71 2.16 2.01-2.33 2.16 2.01-2.33 1.98 1.88-2.09 1.98 1.88-2.09 1.88 1.81-1.96 1.88 1.81-1.96 1.77 1.72-1.83 1.77 1.72-1.83 1.35 1.29-1.42 1.53e-35 1.73 1.65-1.81 4.79e-121 2.41 2.31-2.52 1e-344 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 7.94e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003110/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_PT_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.0449427852985938 binary_exposure exprsweb-t2d-29358691-gcst005413-plink-ukb-20211120 exprsweb-t2d-29358691-gcst005413-plink-ukb-20211120 ExPRSweb_T2D_29358691-GCST005413_PLINK_UKB_20211120 PLINK ExPRSweb_T2D_29358691-GCST005413_PLINK_UKB_20211120 29358691-GCST005413 T2D Binary Binary UKB UK Biobank C+T (GT) Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 143 1.9e-227 0.0156494 0.045 0.59 0.584-0.596 OR 2.35 2.12-2.6 2.35 2.12-2.6 2.25 2.09-2.43 2.25 2.09-2.43 1.98 1.88-2.09 1.98 1.88-2.09 1.86 1.78-1.93 1.86 1.78-1.93 1.73 1.68-1.78 1.73 1.68-1.78 1.38 1.31-1.45 1.19e-39 1.75 1.67-1.83 3.74e-127 2.37 2.27-2.48 1e-330 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 3.98e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003111/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.0449649791477879 binary_exposure exprsweb-t2d-29358691-gcst005413-dbslmm-ukb-20211120 exprsweb-t2d-29358691-gcst005413-dbslmm-ukb-20211120 ExPRSweb_T2D_29358691-GCST005413_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_T2D_29358691-GCST005413_DBSLMM_UKB_20211120 29358691-GCST005413 T2D Binary Binary UKB UK Biobank DBSLMM Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 222 0.35 7.79453e-07 0.0452 0.501 0.495-0.507 OR 1.03 0.892-1.19 1.03 0.892-1.19 1.02 0.918-1.13 1.02 0.918-1.13 0.999 0.935-1.07 0.999 0.935-1.07 0.985 0.939-1.03 0.985 0.939-1.03 1.01 0.972-1.04 1.01 0.972-1.04 1.04 0.995-1.08 0.0882 0.999 0.959-1.04 0.981 1.02 0.976-1.06 0.415 FALSE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003112/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0452432688179122 binary_exposure exprsweb-t2d-29358691-gcst005413-prscs-ukb-20211120 exprsweb-t2d-29358691-gcst005413-prscs-ukb-20211120 ExPRSweb_T2D_29358691-GCST005413_PRSCS_UKB_20211120 PRSCS ExPRSweb_T2D_29358691-GCST005413_PRSCS_UKB_20211120 29358691-GCST005413 T2D Binary Binary UKB UK Biobank PRS-CS Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 1117087 8.2e-345 0.0261726 0.0448 0.616 0.611-0.622 OR 2.84 2.58-3.13 2.84 2.58-3.13 2.67 2.49-2.87 2.67 2.49-2.87 2.36 2.25-2.48 2.36 2.25-2.48 2.2 2.12-2.29 2.2 2.12-2.29 2.02 1.97-2.09 2.02 1.97-2.09 1.44 1.37-1.52 4.46e-47 1.94 1.85-2.03 1.78e-163 2.96 2.83-3.09 1e-490 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003113/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0447832493059482 binary_exposure exprsweb-t2d-29358691-gcst005413-lassosum-ukb-20211120 exprsweb-t2d-29358691-gcst005413-lassosum-ukb-20211120 ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_UKB_20211120 29358691-GCST005413 T2D Binary Binary UKB UK Biobank lassosum Large GWAS 29358691 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Bonas-GuarchS_29358691_GCST005413/harmonised/29358691-GCST005413-GCST005413-build37.f.tsv.gz 311565 2.3e-346 0.0243475 0.0448 0.616 0.61-0.622 OR 2.92 2.65-3.22 2.92 2.65-3.22 2.74 2.55-2.94 2.74 2.55-2.94 2.36 2.25-2.48 2.36 2.25-2.48 2.18 2.1-2.26 2.18 2.1-2.26 2.01 1.95-2.07 2.01 1.95-2.07 1.44 1.37-1.51 1.24e-46 1.91 1.82-2 6.2e-158 2.9 2.77-3.03 1e-477 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 s=0.9;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003109/ScoringFiles/ phewas/ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_29358691-GCST005413_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0447699665151765 binary_exposure exprsweb-t2d-30054458-gcst006867-pt-mgi-freeze3-20211120 exprsweb-t2d-30054458-gcst006867-pt-mgi-freeze3-20211120 ExPRSweb_T2D_30054458-GCST006867_PT_MGI-Freeze3_20211120 PT ExPRSweb_T2D_30054458-GCST006867_PT_MGI-Freeze3_20211120 30054458-GCST006867 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 5693 1.6e-107 0.0369017 0.141 0.6 0.585-0.616 OR 2.7 2.18-3.35 2.7 2.18-3.35 2.73 2.33-3.18 2.73 2.33-3.18 2.47 2.23-2.73 2.47 2.23-2.73 2.18 2.02-2.35 2.18 2.02-2.35 2.04 1.93-2.16 2.04 1.93-2.16 1.46 1.34-1.58 1.59e-19 1.89 1.74-2.05 7.7e-55 2.95 2.73-3.19 3.08e-163 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003100/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.141118376573018 binary_exposure exprsweb-t2d-30054458-gcst006867-plink-mgi-freeze3-20211120 exprsweb-t2d-30054458-gcst006867-plink-mgi-freeze3-20211120 ExPRSweb_T2D_30054458-GCST006867_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_T2D_30054458-GCST006867_PLINK_MGI-Freeze3_20211120 30054458-GCST006867 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 5693 1.6e-107 0.0369017 0.141 0.6 0.585-0.616 OR 2.7 2.18-3.35 2.7 2.18-3.35 2.73 2.33-3.18 2.73 2.33-3.18 2.47 2.23-2.73 2.47 2.23-2.73 2.18 2.02-2.35 2.18 2.02-2.35 2.04 1.93-2.16 2.04 1.93-2.16 1.46 1.34-1.58 1.59e-19 1.89 1.74-2.05 7.7e-55 2.95 2.73-3.19 3.08e-163 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003101/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.141118376573018 binary_exposure exprsweb-t2d-30054458-gcst006867-dbslmm-mgi-freeze3-20211120 exprsweb-t2d-30054458-gcst006867-dbslmm-mgi-freeze3-20211120 ExPRSweb_T2D_30054458-GCST006867_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_T2D_30054458-GCST006867_DBSLMM_MGI-Freeze3_20211120 30054458-GCST006867 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 5052574 1.5e-139 0.0483341 0.14 0.628 0.611-0.643 OR 3.62 2.93-4.48 3.62 2.93-4.48 3.22 2.76-3.75 3.22 2.76-3.75 2.72 2.46-3.02 2.72 2.46-3.02 2.49 2.31-2.69 2.49 2.31-2.69 2.3 2.17-2.43 2.3 2.17-2.43 1.46 1.34-1.59 8.99e-19 2.11 1.94-2.29 6.59e-73 3.4 3.14-3.68 2.18e-199 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003102/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.139666149003062 binary_exposure exprsweb-t2d-30054458-gcst006867-prscs-mgi-freeze3-20211120 exprsweb-t2d-30054458-gcst006867-prscs-mgi-freeze3-20211120 ExPRSweb_T2D_30054458-GCST006867_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_T2D_30054458-GCST006867_PRSCS_MGI-Freeze3_20211120 30054458-GCST006867 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 945820 1.1e-159 0.0561058 0.139 0.637 0.621-0.653 OR 3.29 2.65-4.08 3.29 2.65-4.08 3.29 2.82-3.83 3.29 2.82-3.83 3.07 2.78-3.4 3.07 2.78-3.4 2.68 2.48-2.89 2.68 2.48-2.89 2.39 2.26-2.53 2.39 2.26-2.53 1.51 1.38-1.64 4.22e-21 2.17 1.99-2.35 6.05e-76 3.75 3.46-4.06 7.89e-228 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003103/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.138850030945266 binary_exposure exprsweb-t2d-30054458-gcst006867-lassosum-mgi-freeze3-20211120 exprsweb-t2d-30054458-gcst006867-lassosum-mgi-freeze3-20211120 ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_MGI-Freeze3_20211120 30054458-GCST006867 T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 555512 4.1e-147 0.053459 0.139 0.626 0.609-0.641 OR 3.54 2.87-4.36 3.54 2.87-4.36 3 2.58-3.5 3 2.58-3.5 2.82 2.55-3.12 2.82 2.55-3.12 2.71 2.51-2.92 2.71 2.51-2.92 2.28 2.16-2.41 2.28 2.16-2.41 1.44 1.33-1.57 2.43e-17 2.21 2.03-2.39 2.04e-81 3.49 3.22-3.78 3.9e-209 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 s=0.2;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003099/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.139376044806277 binary_exposure exprsweb-t2d-30054458-gcst006867-pt-ukb-20211120 exprsweb-t2d-30054458-gcst006867-pt-ukb-20211120 ExPRSweb_T2D_30054458-GCST006867_PT_UKB_20211120 PT ExPRSweb_T2D_30054458-GCST006867_PT_UKB_20211120 30054458-GCST006867 T2D Binary Binary UKB UK Biobank C+T (DS) Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 31462 5.3e-2671 0.228184 0.0379 0.816 0.811-0.82 OR 32.1 30-34.3 32.1 30-34.3 23.9 22.8-25.1 23.9 22.8-25.1 16 15.5-16.6 16 15.5-16.6 11.9 11.5-12.3 11.9 11.5-12.3 8.55 8.28-8.82 8.55 8.28-8.82 1.79 1.65-1.94 2.74e-44 3.27 3.04-3.53 3.18e-209 17 15.9-18.2 1e-1450 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003115/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_PT_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.0379130721114652 binary_exposure exprsweb-t2d-30054458-gcst006867-plink-ukb-20211120 exprsweb-t2d-30054458-gcst006867-plink-ukb-20211120 ExPRSweb_T2D_30054458-GCST006867_PLINK_UKB_20211120 PLINK ExPRSweb_T2D_30054458-GCST006867_PLINK_UKB_20211120 30054458-GCST006867 T2D Binary Binary UKB UK Biobank C+T (GT) Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 31462 5.3e-2671 0.228184 0.0379 0.816 0.811-0.82 OR 32.1 30-34.3 32.1 30-34.3 23.9 22.8-25.1 23.9 22.8-25.1 16 15.5-16.6 16 15.5-16.6 11.9 11.5-12.3 11.9 11.5-12.3 8.55 8.28-8.82 8.55 8.28-8.82 1.79 1.65-1.94 2.74e-44 3.27 3.04-3.53 3.18e-209 17 15.9-18.2 1e-1450 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003116/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.0379130721114652 binary_exposure exprsweb-t2d-30054458-gcst006867-dbslmm-ukb-20211120 exprsweb-t2d-30054458-gcst006867-dbslmm-ukb-20211120 ExPRSweb_T2D_30054458-GCST006867_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_T2D_30054458-GCST006867_DBSLMM_UKB_20211120 30054458-GCST006867 T2D Binary Binary UKB UK Biobank DBSLMM Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 5052993 3.6e-2005 0.156564 0.0409 0.778 0.774-0.783 OR 15.7 14.7-16.8 15.7 14.7-16.8 12.2 11.6-12.8 12.2 11.6-12.8 9.04 8.71-9.37 9.04 8.71-9.37 7.39 7.16-7.63 7.39 7.16-7.63 5.99 5.81-6.17 5.99 5.81-6.17 2.09 1.94-2.26 1.08e-77 4.08 3.8-4.38 1e-324 14.2 13.3-15.2 1e-1330 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003117/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0409334180240091 binary_exposure exprsweb-t2d-30054458-gcst006867-prscs-ukb-20211120 exprsweb-t2d-30054458-gcst006867-prscs-ukb-20211120 ExPRSweb_T2D_30054458-GCST006867_PRSCS_UKB_20211120 PRSCS ExPRSweb_T2D_30054458-GCST006867_PRSCS_UKB_20211120 30054458-GCST006867 T2D Binary Binary UKB UK Biobank PRS-CS Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 945921 9.7e-2116 0.170585 0.0406 0.786 0.782-0.791 OR 16.8 15.7-17.9 16.8 15.7-17.9 13.2 12.6-13.9 13.2 12.6-13.9 9.71 9.36-10.1 9.71 9.36-10.1 7.91 7.67-8.16 7.91 7.67-8.16 6.53 6.33-6.73 6.53 6.33-6.73 2.06 1.9-2.23 1.47e-70 4.1 3.81-4.41 1e-312 15.3 14.3-16.4 1e-1350 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003118/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0405698804021261 binary_exposure exprsweb-t2d-30054458-gcst006867-lassosum-ukb-20211120 exprsweb-t2d-30054458-gcst006867-lassosum-ukb-20211120 ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_UKB_20211120 30054458-GCST006867 T2D Binary Binary UKB UK Biobank lassosum Large GWAS 30054458 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/XueA_30054458_GCST006867/harmonised/30054458-GCST006867-EFO_0001360-build37.f.tsv.gz 555528 2.1e-2790 0.242604 0.0373 0.825 0.82-0.829 OR 34.9 32.7-37.4 34.9 32.7-37.4 26.3 25.1-27.6 26.3 25.1-27.6 17.4 16.8-18 17.4 16.8-18 13 12.6-13.4 13 12.6-13.4 9.24 8.94-9.54 9.24 8.94-9.54 1.74 1.6-1.9 1.14e-37 3.4 3.15-3.67 2.96e-211 18.4 17.2-19.8 1e-1460 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 s=0.2;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003114/ScoringFiles/ phewas/ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_30054458-GCST006867_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0372874722295333 binary_exposure exprsweb-egfr-creatine-30510-irnt-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-irnt-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_30510-irnt_PT_MGI-Freeze3_20211120 30510-irnt Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 11173 0.00011 0.000564567040980725 Beta 0.147 0.062916-0.231084 0.147 0.062916-0.231084 0.0576 -0.00218-0.11738 0.0576 -0.00218-0.11738 0.0409 0.002484-0.079316 0.0409 0.002484-0.079316 0.0333 0.005272-0.061328 0.0333 0.005272-0.061328 0.0385 0.0190568-0.0579432 0.0385 0.0190568-0.0579432 0.0405 0.016784-0.064216 0.000837 0.0495 0.025784-0.073216 4.22e-05 0.0699 0.045596-0.094204 1.72e-08 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003230/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394600692565944 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-irnt-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-irnt-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_30510-irnt_PLINK_MGI-Freeze3_20211120 30510-irnt Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 19491 0.00026 0.000411009868028221 Beta 0.115 0.030916-0.199084 0.115 0.030916-0.199084 0.0715 0.01172-0.13128 0.0715 0.01172-0.13128 0.0504 0.011984-0.088816 0.0504 0.011984-0.088816 0.0268 -0.001228-0.054828 0.0268 -0.001228-0.054828 0.0353 0.0158764-0.0547236 0.0353 0.0158764-0.0547236 0.0255 0.001784-0.049216 0.0355 0.0394 0.015488-0.063312 0.00121 0.0581 0.034188-0.082012 2.06e-06 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 3.98e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003231/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394633479692056 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_30510-irnt_DBSLMM_MGI-Freeze3_20211120 30510-irnt Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7062258 1.7e-07 0.000342682851296882 Beta 0.0647 -0.01958-0.14898 0.0647 -0.01958-0.14898 0.0688 0.008824-0.128776 0.0688 0.008824-0.128776 0.0578 0.019188-0.096412 0.0578 0.019188-0.096412 0.0575 0.029472-0.085528 0.0575 0.029472-0.085528 0.048 0.0284392-0.0675608 0.048 0.0284392-0.0675608 0.00985 -0.013866-0.033566 0.416 0.0431 0.018992-0.067208 0.000458 0.0681 0.043404-0.092796 6.01e-08 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003232/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394362375997665 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-irnt-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_30510-irnt_PRSCS_MGI-Freeze3_20211120 30510-irnt Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 9.9e-10 0.000523589963271687 Beta 0.0997 0.015616-0.183784 0.0997 0.015616-0.183784 0.0446 -0.015376-0.104576 0.0446 -0.015376-0.104576 0.0622 0.023588-0.100812 0.0622 0.023588-0.100812 0.0517 0.023672-0.079728 0.0517 0.023672-0.079728 0.0535 0.0339196-0.0730804 0.0535 0.0339196-0.0730804 0.0554 0.031488-0.079312 5.29e-06 0.0706 0.046688-0.094512 6.6e-09 0.0978 0.0733-0.1223 6.31e-15 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003233/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394169697022639 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-irnt-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_30510-irnt_LASSOSUM_MGI-Freeze3_20211120 30510-irnt Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 557260 1.4e-05 0.000905047699878173 Beta 0.116 0.031916-0.200084 0.116 0.031916-0.200084 0.135 0.07522-0.19478 0.135 0.07522-0.19478 0.0909 0.052484-0.129316 0.0909 0.052484-0.129316 0.064 0.035972-0.092028 0.064 0.035972-0.092028 0.0421 0.0227156-0.0614844 0.0421 0.0227156-0.0614844 0.0235 -0.00002-0.04702 0.0507 0.0516 0.027884-0.075316 1.87e-05 0.0681 0.044188-0.092012 2.52e-08 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 s=1;Lambda=0.00695 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003229/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394527642895819 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-raw-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-raw-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_30510-raw_PT_MGI-Freeze3_20211120 30510-raw Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10760 5.4e-06 0.000426735857581007 Beta 0.0926 0.008516-0.176684 0.0926 0.008516-0.176684 0.118 0.05822-0.17778 0.118 0.05822-0.17778 0.0742 0.035784-0.112616 0.0742 0.035784-0.112616 0.052 0.023972-0.080028 0.052 0.023972-0.080028 0.0419 0.022496-0.061304 0.0419 0.022496-0.061304 -0.00537 -0.02889-0.01815 0.655 0.0359 0.012184-0.059616 0.00307 0.0504 0.026292-0.074508 4.08e-05 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 5.01e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003235/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394491145870134 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-raw-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-raw-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_30510-raw_PLINK_MGI-Freeze3_20211120 30510-raw Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 19006 5.3e-07 0.000318861313384889 Beta 0.0563 -0.027784-0.140384 0.0563 -0.027784-0.140384 0.016 -0.04378-0.07578 0.016 -0.04378-0.07578 0.0368 -0.001616-0.075216 0.0368 -0.001616-0.075216 0.0509 0.023068-0.078732 0.0509 0.023068-0.078732 0.0438 0.0244156-0.0631844 0.0438 0.0244156-0.0631844 -0.00206 -0.02558-0.02146 0.863 0.0473 0.023388-0.071212 0.000106 0.0613 0.037192-0.085408 6.24e-07 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 3.98e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003236/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.039440526484014 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-raw-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_30510-raw_DBSLMM_MGI-Freeze3_20211120 30510-raw Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7021804 5.6e-06 0.000320463541181333 Beta 0.0862 0.00192-0.17048 0.0862 0.00192-0.17048 0.0609 0.000924-0.120876 0.0609 0.000924-0.120876 0.0367 -0.001912-0.075312 0.0367 -0.001912-0.075312 0.0366 0.008572-0.064628 0.0366 0.008572-0.064628 0.0439 0.024398-0.063402 0.0439 0.024398-0.063402 -0.000935 -0.024847-0.022977 0.939 0.034 0.010088-0.057912 0.00539 0.058 0.0335-0.0825 3.57e-06 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003237/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394492971296317 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-raw-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-raw-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_30510-raw_PRSCS_MGI-Freeze3_20211120 30510-raw Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 6.9e-10 0.000431820520174146 Beta 0.0186 -0.065484-0.102684 0.0186 -0.065484-0.102684 0.0578 -0.00198-0.11758 0.0578 -0.00198-0.11758 0.0625 0.024084-0.100916 0.0625 0.024084-0.100916 0.0705 0.042472-0.098528 0.0705 0.042472-0.098528 0.0571 0.0375784-0.0766216 0.0571 0.0375784-0.0766216 0.0389 0.014988-0.062812 0.0014 0.0681 0.044188-0.092012 2.11e-08 0.0953 0.070604-0.119996 3.64e-14 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003238/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394156209027834 normal_range 0.6 1.3 exprsweb-egfr-creatine-30510-raw-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-30510-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30510-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_30510-raw_LASSOSUM_MGI-Freeze3_20211120 30510-raw Creatinine (enzymatic) in urine Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 530378 4.8e-06 0.000895955733644376 Beta 0.126 0.041916-0.210084 0.126 0.041916-0.210084 0.0953 0.03552-0.15508 0.0953 0.03552-0.15508 0.0876 0.049184-0.126016 0.0876 0.049184-0.126016 0.0654 0.037568-0.093232 0.0654 0.037568-0.093232 0.0534 0.0340352-0.0727648 0.0534 0.0340352-0.0727648 0.0145 -0.00902-0.03802 0.225 0.0327 0.00918-0.05622 0.00636 0.0692 0.045288-0.093112 1.27e-08 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 s=1;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003234/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30510-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30510-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394487104455189 normal_range 0.6 1.3 exprsweb-totalcholesterol-30690-irnt-pt-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-irnt-pt-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_TotalCholesterol_30690-irnt_PT_MGI-Freeze3_20211120 30690-irnt Cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2822 4.5e-143 0.0574806851834556 Beta 0.655 0.514664-0.795336 0.655 0.514664-0.795336 0.577 0.477236-0.676764 0.577 0.477236-0.676764 0.472 0.407908-0.536092 0.472 0.407908-0.536092 0.421 0.374352-0.467648 0.421 0.374352-0.467648 0.394 0.361856-0.426144 0.394 0.361856-0.426144 0.255 0.217368-0.292632 2.2e-40 0.438 0.398996-0.477004 6.36e-108 0.622 0.58182-0.66218 5.51e-202 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003135/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1014.53325293368 normal_range 0.01 200 exprsweb-totalcholesterol-30690-irnt-plink-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-irnt-plink-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_TotalCholesterol_30690-irnt_PLINK_MGI-Freeze3_20211120 30690-irnt Cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 3566 8.9e-149 0.0604283672571424 Beta 0.63 0.489664-0.770336 0.63 0.489664-0.770336 0.542 0.442236-0.641764 0.542 0.442236-0.641764 0.464 0.399908-0.528092 0.464 0.399908-0.528092 0.414 0.367548-0.460452 0.414 0.367548-0.460452 0.394 0.361856-0.426144 0.394 0.361856-0.426144 0.261 0.223368-0.298632 6.69e-42 0.454 0.415584-0.492416 8.51e-119 0.633 0.593016-0.672984 3.13e-212 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003136/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1011.81002726786 normal_range 0.01 200 exprsweb-totalcholesterol-30690-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_TotalCholesterol_30690-irnt_DBSLMM_MGI-Freeze3_20211120 30690-irnt Cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7459292 3.4e-151 0.0627773943275204 Beta 0.58 0.439664-0.720336 0.58 0.439664-0.720336 0.494 0.394236-0.593764 0.494 0.394236-0.593764 0.447 0.382908-0.511092 0.447 0.382908-0.511092 0.459 0.412744-0.505256 0.459 0.412744-0.505256 0.408 0.376052-0.439948 0.408 0.376052-0.439948 0.269 0.231368-0.306632 1.29e-44 0.449 0.410388-0.487612 3.15e-115 0.645 0.6058-0.6842 4.56e-228 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003137/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1010.66326891298 normal_range 0.01 200 exprsweb-totalcholesterol-30690-irnt-prscs-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_TotalCholesterol_30690-irnt_PRSCS_MGI-Freeze3_20211120 30690-irnt Cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 3.2e-168 0.0693672645286796 Beta 0.731 0.590664-0.871336 0.731 0.590664-0.871336 0.63 0.530236-0.729764 0.63 0.530236-0.729764 0.533 0.468908-0.597092 0.533 0.468908-0.597092 0.489 0.442548-0.535452 0.489 0.442548-0.535452 0.437 0.404856-0.469144 0.437 0.404856-0.469144 0.242 0.204368-0.279632 2.41e-36 0.45 0.4108-0.4892 1.56e-112 0.672 0.631428-0.712572 4.01e-231 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003138/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1002.64207952968 normal_range 0.01 200 exprsweb-totalcholesterol-30690-irnt-lassosum-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_TotalCholesterol_30690-irnt_LASSOSUM_MGI-Freeze3_20211120 30690-irnt Cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 585328 3.6e-148 0.0571479322853187 Beta 0.593 0.452468-0.733532 0.593 0.452468-0.733532 0.57 0.47004-0.66996 0.57 0.47004-0.66996 0.479 0.414908-0.543092 0.479 0.414908-0.543092 0.439 0.392352-0.485648 0.439 0.392352-0.485648 0.399 0.36666-0.43134 0.399 0.36666-0.43134 0.242 0.204172-0.279828 6.4e-36 0.422 0.382604-0.461396 2.3e-97 0.625 0.584428-0.665572 6.57e-200 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 s=0.9;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003134/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1012.10031490463 normal_range 0.01 200 exprsweb-totalcholesterol-30690-raw-pt-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-raw-pt-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_TotalCholesterol_30690-raw_PT_MGI-Freeze3_20211120 30690-raw Cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2863 1.6e-143 0.0577453386640381 Beta 0.63 0.489664-0.770336 0.63 0.489664-0.770336 0.614 0.514236-0.713764 0.614 0.514236-0.713764 0.474 0.409908-0.538092 0.474 0.409908-0.538092 0.437 0.390548-0.483452 0.437 0.390548-0.483452 0.4 0.367856-0.432144 0.4 0.367856-0.432144 0.277 0.239564-0.314436 2.33e-47 0.424 0.384996-0.463004 1.22e-100 0.629 0.58882-0.66918 2.23e-207 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003140/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1014.31144336217 normal_range 0.01 200 exprsweb-totalcholesterol-30690-raw-plink-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-raw-plink-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_TotalCholesterol_30690-raw_PLINK_MGI-Freeze3_20211120 30690-raw Cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 3604 4.6e-149 0.0606244973456015 Beta 0.627 0.486664-0.767336 0.627 0.486664-0.767336 0.544 0.444236-0.643764 0.544 0.444236-0.643764 0.491 0.426908-0.555092 0.491 0.426908-0.555092 0.448 0.401548-0.494452 0.448 0.401548-0.494452 0.395 0.362856-0.427144 0.395 0.362856-0.427144 0.263 0.225564-0.300436 5.83e-43 0.444 0.404996-0.483004 2.18e-110 0.63 0.590016-0.669984 2.39e-210 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 3.16e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003141/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1011.67403051117 normal_range 0.01 200 exprsweb-totalcholesterol-30690-raw-dbslmm-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_TotalCholesterol_30690-raw_DBSLMM_MGI-Freeze3_20211120 30690-raw Cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7459288 4.9e-152 0.063111014387233 Beta 0.524 0.383664-0.664336 0.524 0.383664-0.664336 0.527 0.427236-0.626764 0.527 0.427236-0.626764 0.465 0.400908-0.529092 0.465 0.400908-0.529092 0.442 0.395548-0.488452 0.442 0.395548-0.488452 0.404 0.372052-0.435948 0.404 0.372052-0.435948 0.268 0.230368-0.305632 2.99e-44 0.454 0.415388-0.492612 4.79e-118 0.644 0.604996-0.683004 5.23e-229 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003142/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1010.26249979288 normal_range 0.01 200 exprsweb-totalcholesterol-30690-raw-prscs-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-raw-prscs-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_TotalCholesterol_30690-raw_PRSCS_MGI-Freeze3_20211120 30690-raw Cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 1.1e-165 0.0709563334613966 Beta 0.656 0.515664-0.796336 0.656 0.515664-0.796336 0.639 0.539236-0.738764 0.639 0.539236-0.738764 0.546 0.482104-0.609896 0.546 0.482104-0.609896 0.486 0.439548-0.532452 0.486 0.439548-0.532452 0.435 0.402856-0.467144 0.435 0.402856-0.467144 0.256 0.218564-0.293436 1e-40 0.458 0.4188-0.4972 2.42e-116 0.681 0.640624-0.721376 4.68e-239 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003143/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1003.82815613752 normal_range 0.01 200 exprsweb-totalcholesterol-30690-raw-lassosum-mgi-freeze3-20211120 exprsweb-totalcholesterol-30690-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_TotalCholesterol_30690-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_TotalCholesterol_30690-raw_LASSOSUM_MGI-Freeze3_20211120 30690-raw Cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 569518 7.1e-144 0.0562161722576276 Beta 0.617 0.476468-0.757532 0.617 0.476468-0.757532 0.553 0.45304-0.65296 0.553 0.45304-0.65296 0.465 0.400908-0.529092 0.465 0.400908-0.529092 0.443 0.396352-0.489648 0.443 0.396352-0.489648 0.393 0.36066-0.42534 0.393 0.36066-0.42534 0.212 0.173976-0.250024 9.58e-28 0.41 0.370604-0.449396 7.03e-93 0.604 0.563232-0.644768 3.27e-185 TRUE FALSE FALSE TRUE Both 9115 0 GRCh37/hg19 s=0.9;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003139/ScoringFiles/ phewas/ExPRSweb_TotalCholesterol_30690-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_TotalCholesterol_30690-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 1014.14760545564 normal_range 0.01 200 exprsweb-egfr-creatine-30700-irnt-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-irnt-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_30700-irnt_PT_MGI-Freeze3_20211120 30700-irnt Creatinine (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 19120 2.5e-146 0.022440047225247 Beta 0.457 0.37272-0.54128 0.457 0.37272-0.54128 0.431 0.371024-0.490976 0.431 0.371024-0.490976 0.351 0.312192-0.389808 0.351 0.312192-0.389808 0.314 0.285776-0.342224 0.314 0.285776-0.342224 0.283 0.263204-0.302796 0.283 0.263204-0.302796 0.145 0.12148-0.16852 2.25e-33 0.23 0.205892-0.254108 1e-77 0.416 0.390128-0.441872 3.03e-219 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 5.01e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003240/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0382442600099065 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-irnt-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-irnt-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_30700-irnt_PLINK_MGI-Freeze3_20211120 30700-irnt Creatinine (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 29361 8.1e-141 0.0201028504992473 Beta 0.486 0.40172-0.57028 0.486 0.40172-0.57028 0.39 0.329828-0.450172 0.39 0.329828-0.450172 0.343 0.304192-0.381808 0.343 0.304192-0.381808 0.317 0.288776-0.345224 0.317 0.288776-0.345224 0.257 0.237204-0.276796 0.257 0.237204-0.276796 0.129 0.10548-0.15252 5.93e-27 0.233 0.208892-0.257108 1.69e-79 0.384 0.358324-0.409676 7.84e-189 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 5.01e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003241/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0382902816998355 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_30700-irnt_DBSLMM_MGI-Freeze3_20211120 30700-irnt Creatinine (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7451744 7.3e-145 0.0204544306092026 Beta 0.4 0.31572-0.48428 0.4 0.31572-0.48428 0.383 0.32322-0.44278 0.383 0.32322-0.44278 0.361 0.322584-0.399416 0.361 0.322584-0.399416 0.315 0.286972-0.343028 0.315 0.286972-0.343028 0.262 0.2425372-0.2814628 0.262 0.2425372-0.2814628 0.137 0.113676-0.160324 1.05e-30 0.232 0.20848-0.25552 9.73e-83 0.386 0.361696-0.410304 1.71e-212 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003242/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0382564312252887 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-irnt-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_30700-irnt_PRSCS_MGI-Freeze3_20211120 30700-irnt Creatinine (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 4.6e-189 0.0287559275973546 Beta 0.474 0.389524-0.558476 0.474 0.389524-0.558476 0.453 0.392828-0.513172 0.453 0.392828-0.513172 0.393 0.354192-0.431808 0.393 0.354192-0.431808 0.361 0.332776-0.389224 0.361 0.332776-0.389224 0.312 0.2924-0.3316 0.312 0.2924-0.3316 0.158 0.13448-0.18152 1.02e-39 0.259 0.23548-0.28252 2.33e-103 0.463 0.437912-0.488088 1.74e-287 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003243/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0378903512948283 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-irnt-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_30700-irnt_LASSOSUM_MGI-Freeze3_20211120 30700-irnt Creatinine (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 828634 9.4e-171 0.0258899639309866 Beta 0.484 0.39972-0.56828 0.484 0.39972-0.56828 0.418 0.358024-0.477976 0.418 0.358024-0.477976 0.362 0.323388-0.400612 0.362 0.323388-0.400612 0.339 0.310972-0.367028 0.339 0.310972-0.367028 0.295 0.2754588-0.3145412 0.295 0.2754588-0.3145412 0.126 0.102676-0.149324 5.06e-26 0.253 0.229284-0.276716 2.62e-97 0.43 0.404912-0.455088 1.05e-249 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 s=0.5;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003239/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0380411777773587 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-raw-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-raw-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_30700-raw_PT_MGI-Freeze3_20211120 30700-raw Creatinine (umol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 3503 1.5e-108 0.0184360152766018 Beta 0.447 0.36272-0.53128 0.447 0.36272-0.53128 0.426 0.366024-0.485976 0.426 0.366024-0.485976 0.35 0.311192-0.388808 0.35 0.311192-0.388808 0.292 0.263776-0.320224 0.292 0.263776-0.320224 0.242 0.222204-0.261796 0.242 0.222204-0.261796 0.12 0.096284-0.143716 4.93e-23 0.189 0.164892-0.213108 4.04e-53 0.354 0.328324-0.379676 6.63e-161 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 3.16e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003245/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0385624013749638 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-raw-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-raw-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_30700-raw_PLINK_MGI-Freeze3_20211120 30700-raw Creatinine (umol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6012 1.8e-76 0.0133019458052658 Beta 0.311 0.226916-0.395084 0.311 0.226916-0.395084 0.316 0.25622-0.37578 0.316 0.25622-0.37578 0.282 0.243584-0.320416 0.282 0.243584-0.320416 0.227 0.198972-0.255028 0.227 0.198972-0.255028 0.2 0.1805372-0.2194628 0.2 0.1805372-0.2194628 0.0864 0.06288-0.10992 5.39e-13 0.172 0.148088-0.195912 1.16e-45 0.28 0.255696-0.304304 2.29e-112 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 1.00e-07 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003246/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0388366384957309 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-raw-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_30700-raw_DBSLMM_MGI-Freeze3_20211120 30700-raw Creatinine (umol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7451626 4e-104 0.0136260458861048 Beta 0.347 0.262916-0.431084 0.347 0.262916-0.431084 0.299 0.23922-0.35878 0.299 0.23922-0.35878 0.259 0.220388-0.297612 0.259 0.220388-0.297612 0.247 0.218972-0.275028 0.247 0.218972-0.275028 0.203 0.183498-0.222502 0.203 0.183498-0.222502 0.125 0.101284-0.148716 4.07e-25 0.205 0.181088-0.228912 3.43e-63 0.314 0.289696-0.338304 2.02e-141 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003247/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0386000290028766 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-raw-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-raw-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_30700-raw_PRSCS_MGI-Freeze3_20211120 30700-raw Creatinine (umol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 3.5e-162 0.0245423714640979 Beta 0.421 0.336524-0.505476 0.421 0.336524-0.505476 0.406 0.345828-0.466172 0.406 0.345828-0.466172 0.367 0.328192-0.405808 0.367 0.328192-0.405808 0.339 0.310776-0.367224 0.339 0.310776-0.367224 0.301 0.2814-0.3206 0.301 0.2814-0.3206 0.141 0.11748-0.16452 8.32e-32 0.225 0.201088-0.248912 1.4e-76 0.43 0.404716-0.455284 1.77e-242 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003248/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0381121637018701 normal_range 0.6 1.3 exprsweb-egfr-creatine-30700-raw-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-30700-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_30700-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_30700-raw_LASSOSUM_MGI-Freeze3_20211120 30700-raw Creatinine (umol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 638561 1.7e-133 0.0208773849702504 Beta 0.453 0.36872-0.53728 0.453 0.36872-0.53728 0.379 0.319024-0.438976 0.379 0.319024-0.438976 0.343 0.304388-0.381612 0.343 0.304388-0.381612 0.31 0.281776-0.338224 0.31 0.281776-0.338224 0.264 0.2444392-0.2835608 0.264 0.2444392-0.2835608 0.122 0.098676-0.145324 1.87e-24 0.222 0.198088-0.245912 1.07e-74 0.385 0.359912-0.410088 1.06e-199 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 s=0.5;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003244/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_30700-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_30700-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0383517143510923 normal_range 0.6 1.3 exprsweb-c-reactive-protein-30710-irnt-pt-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-irnt-pt-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_C-reactive-protein_30710-irnt_PT_MGI-Freeze3_20211120 30710-irnt C-reactive protein (quantile) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 9373 3.3e-20 0.0148667782225603 Beta 0.416 0.221764-0.610236 0.416 0.221764-0.610236 0.395 0.256624-0.533376 0.395 0.256624-0.533376 0.383 0.293624-0.472376 0.383 0.293624-0.472376 0.33 0.264732-0.395268 0.33 0.264732-0.395268 0.253 0.207136-0.298864 0.253 0.207136-0.298864 0.055 0.002864-0.107136 0.0383 0.154 0.098532-0.209468 5.31e-08 0.326 0.264652-0.387348 2.13e-25 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 1.58e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002865/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.588119308584412 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-irnt-plink-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-irnt-plink-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_C-reactive-protein_30710-irnt_PLINK_MGI-Freeze3_20211120 30710-irnt C-reactive protein (quantile) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 13371 6.7e-23 0.0138021431602595 Beta 0.579 0.385156-0.772844 0.579 0.385156-0.772844 0.398 0.25982-0.53618 0.398 0.25982-0.53618 0.4 0.31082-0.48918 0.4 0.31082-0.48918 0.317 0.251732-0.382268 0.317 0.251732-0.382268 0.225 0.179136-0.270864 0.225 0.179136-0.270864 0.129 0.07608-0.18192 1.71e-06 0.167 0.112708-0.221292 1.67e-09 0.334 0.274024-0.393976 1.01e-27 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 1.58e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002866/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.586739370796338 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_C-reactive-protein_30710-irnt_DBSLMM_MGI-Freeze3_20211120 30710-irnt C-reactive protein (quantile) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10306310 5.7e-21 0.0101599224885006 Beta 0.53 0.336548-0.723452 0.53 0.336548-0.723452 0.4 0.262408-0.537592 0.4 0.262408-0.537592 0.344 0.255604-0.432396 0.344 0.255604-0.432396 0.265 0.200712-0.329288 0.265 0.200712-0.329288 0.215 0.170508-0.259492 0.215 0.170508-0.259492 0.0568 0.005056-0.108544 0.0315 0.124 0.070688-0.177312 4.81e-06 0.272 0.215944-0.328056 1.82e-21 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002867/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.58772659778652 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-irnt-prscs-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_C-reactive-protein_30710-irnt_PRSCS_MGI-Freeze3_20211120 30710-irnt C-reactive protein (quantile) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 6.2e-30 0.0220314467995081 Beta 0.442 0.248352-0.635648 0.442 0.248352-0.635648 0.416 0.278212-0.553788 0.416 0.278212-0.553788 0.377 0.288408-0.465592 0.377 0.288408-0.465592 0.388 0.323712-0.452288 0.388 0.323712-0.452288 0.286 0.241116-0.330884 0.286 0.241116-0.330884 0.122 0.071236-0.172764 2.38e-06 0.227 0.174276-0.279724 2.96e-17 0.404 0.346768-0.461232 1.34e-43 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002868/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.583160640407701 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-irnt-lassosum-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_C-reactive-protein_30710-irnt_LASSOSUM_MGI-Freeze3_20211120 30710-irnt C-reactive protein (quantile) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 763400 1.5e-20 0.0206322134876563 Beta 0.36 0.166156-0.553844 0.36 0.166156-0.553844 0.434 0.296408-0.571592 0.434 0.296408-0.571592 0.322 0.233408-0.410592 0.322 0.233408-0.410592 0.304 0.239516-0.368484 0.304 0.239516-0.368484 0.222 0.177116-0.266884 0.222 0.177116-0.266884 0.144 0.092844-0.195156 3.43e-08 0.226 0.172492-0.279508 9.77e-17 0.336 0.279748-0.392252 1.04e-31 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 s=0.5;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002864/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.587937431861464 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-raw-pt-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-raw-pt-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_C-reactive-protein_30710-raw_PT_MGI-Freeze3_20211120 30710-raw C-reactive protein (mg/L) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 630 3e-12 0.0128874384994512 Beta 0.548 0.354352-0.741648 0.548 0.354352-0.741648 0.383 0.245408-0.520592 0.383 0.245408-0.520592 0.234 0.145408-0.322592 0.234 0.145408-0.322592 0.227 0.162516-0.291484 0.227 0.162516-0.291484 0.179 0.134312-0.223688 0.179 0.134312-0.223688 0.104 0.05206-0.15594 9.38e-05 0.159 0.104904-0.213096 8.07e-09 0.265 0.209924-0.320076 4.19e-21 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 3.98e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002870/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.592218510479284 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-raw-plink-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-raw-plink-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_C-reactive-protein_30710-raw_PLINK_MGI-Freeze3_20211120 30710-raw C-reactive protein (mg/L) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 837 5e-13 0.0133351254858047 Beta 0.477 0.283352-0.670648 0.477 0.283352-0.670648 0.354 0.216408-0.491592 0.354 0.216408-0.491592 0.258 0.169604-0.346396 0.258 0.169604-0.346396 0.247 0.182712-0.311288 0.247 0.182712-0.311288 0.207 0.162312-0.251688 0.207 0.162312-0.251688 0.121 0.069452-0.172548 4.02e-06 0.16 0.106884-0.213116 3.41e-09 0.299 0.243532-0.354468 5.21e-26 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 1.58e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002871/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.591814053705675 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-raw-dbslmm-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_C-reactive-protein_30710-raw_DBSLMM_MGI-Freeze3_20211120 30710-raw C-reactive protein (mg/L) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10306271 3.4e-10 0.00800857075318242 Beta 0.276 0.082156-0.469844 0.276 0.082156-0.469844 0.154 0.016212-0.291788 0.154 0.016212-0.291788 0.148 0.059408-0.236592 0.148 0.059408-0.236592 0.135 0.070516-0.199484 0.135 0.070516-0.199484 0.162 0.117312-0.206688 0.162 0.117312-0.206688 0.0941 0.040984-0.147216 0.000513 0.117 0.064276-0.169724 1.33e-05 0.237 0.18114-0.29286 9.63e-17 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002872/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.593276158847633 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-raw-prscs-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-raw-prscs-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_C-reactive-protein_30710-raw_PRSCS_MGI-Freeze3_20211120 30710-raw C-reactive protein (mg/L) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 8e-23 0.0171866290784533 Beta 0.641 0.447548-0.834452 0.641 0.447548-0.834452 0.5 0.362408-0.637592 0.5 0.362408-0.637592 0.351 0.262408-0.439592 0.351 0.262408-0.439592 0.282 0.217516-0.346484 0.282 0.217516-0.346484 0.241 0.196312-0.285688 0.241 0.196312-0.285688 0.0977 0.046152-0.149248 0.000207 0.205 0.15208-0.25792 3.28e-14 0.338 0.282532-0.393468 5.61e-33 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002873/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.58677696053735 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-30710-raw-lassosum-mgi-freeze3-20211120 exprsweb-c-reactive-protein-30710-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_30710-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_C-reactive-protein_30710-raw_LASSOSUM_MGI-Freeze3_20211120 30710-raw C-reactive protein (mg/L) Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 481279 4.2e-19 0.0164965980378032 Beta 0.637 0.443352-0.830648 0.637 0.443352-0.830648 0.507 0.369212-0.644788 0.507 0.369212-0.644788 0.413 0.324408-0.501592 0.413 0.324408-0.501592 0.323 0.258712-0.387288 0.323 0.258712-0.387288 0.229 0.184312-0.273688 0.229 0.184312-0.273688 0.142 0.089276-0.194724 1.25e-07 0.157 0.104864-0.209136 4e-09 0.321 0.265336-0.376664 1.35e-29 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 s=0.5;Lambda=0.00428 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002869/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_30710-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_30710-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.588685014599415 normal_range 0.01 0.3 mg/dl exprsweb-egfr-cystatinc-30720-irnt-pt-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-irnt-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-CystatinC_30720-irnt_PT_MGI-Freeze3_20211120 30720-irnt Cystatin C (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 346 0.66 0.0404174194512705 Beta 1.05 -0.01428-2.11428 1.05 -0.01428-2.11428 0.482 -0.34316-1.30716 0.482 -0.34316-1.30716 0.0816 -0.4966-0.6598 0.0816 -0.4966-0.6598 0.0177 -0.39782-0.43322 0.0177 -0.39782-0.43322 0.0919 -0.2021-0.3859 0.0919 -0.2021-0.3859 0.26 -0.12024-0.64024 0.181 0.346 -0.02052-0.71252 0.0647 0.221 -0.11808-0.56008 0.202 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 3.98e-15 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003280/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214175377759257 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-irnt-plink-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-irnt-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-CystatinC_30720-irnt_PLINK_MGI-Freeze3_20211120 30720-irnt Cystatin C (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 415 0.65 0.0587116092339106 Beta -0.532 -1.5904-0.5264 -0.532 -1.5904-0.5264 -0.503 -1.336-0.33 -0.503 -1.336-0.33 -0.192 -0.76824-0.38424 -0.192 -0.76824-0.38424 0.098 -0.31948-0.51548 0.098 -0.31948-0.51548 0.156 -0.13408-0.44608 0.156 -0.13408-0.44608 0.137 -0.22952-0.50352 0.466 0.284 -0.06488-0.63288 0.11 0.347 -0.00776-0.70176 0.0545 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 1.58e-102 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003281/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214166892265218 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_30720-irnt_DBSLMM_MGI-Freeze3_20211120 30720-irnt Cystatin C (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7451904 0.81 0.0201872686324914 Beta -0.584 -1.662-0.494 -0.584 -1.662-0.494 0.0229 -0.82186-0.86766 0.0229 -0.82186-0.86766 -0.0472 -0.62344-0.52904 -0.0472 -0.62344-0.52904 0.227 -0.19636-0.65036 0.227 -0.19636-0.65036 0.191 -0.10104-0.48304 0.191 -0.10104-0.48304 -0.0189 -0.42266-0.38486 0.927 -0.15 -0.47732-0.17732 0.369 0.00176 -0.37652-0.38004 0.993 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003282/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214494674223231 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-irnt-prscs-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-CystatinC_30720-irnt_PRSCS_MGI-Freeze3_20211120 30720-irnt Cystatin C (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 0.99 0.0638011087059434 Beta 1.83 0.77748-2.88252 1.83 0.77748-2.88252 0.857 0.024-1.69 0.857 0.024-1.69 0.417 -0.1612-0.9952 0.417 -0.1612-0.9952 0.413 -0.03192-0.85792 0.413 -0.03192-0.85792 0.382 0.07624-0.68776 0.382 0.07624-0.68776 0.0169 -0.37118-0.40498 0.932 -0.00595 -0.36463-0.35273 0.974 0.335 -0.09032-0.76032 0.123 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003283/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214615291985705 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-irnt-lassosum-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_30720-irnt_LASSOSUM_MGI-Freeze3_20211120 30720-irnt Cystatin C (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 879560 0.83 0.0817294077165443 Beta 0.343 -0.73304-1.41904 0.343 -0.73304-1.41904 0.777 -0.04816-1.60216 0.777 -0.04816-1.60216 0.801 0.22672-1.37528 0.801 0.22672-1.37528 0.611 0.19352-1.02848 0.611 0.19352-1.02848 0.286 -0.02368-0.59568 0.286 -0.02368-0.59568 0.117 -0.25736-0.49136 0.538 0.0215 -0.33326-0.37626 0.906 0.291 -0.14216-0.72416 0.189 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 s=0.9;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003279/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214514337385094 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-raw-pt-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-raw-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-CystatinC_30720-raw_PT_MGI-Freeze3_20211120 30720-raw Cystatin C (mg/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 931 0.57 0.0434451995817922 Beta 0.627 -0.4706-1.7246 0.627 -0.4706-1.7246 0.488 -0.345-1.321 0.488 -0.345-1.321 0.284 -0.2942-0.8622 0.284 -0.2942-0.8622 0.304 -0.1174-0.7254 0.304 -0.1174-0.7254 0.302 0.00212-0.60188 0.302 0.00212-0.60188 0.217 -0.13384-0.56784 0.225 0.208 -0.13696-0.55296 0.237 0.345 -0.02348-0.71348 0.0673 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 1.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003285/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213910466916294 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-raw-plink-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-raw-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-CystatinC_30720-raw_PLINK_MGI-Freeze3_20211120 30720-raw Cystatin C (mg/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1057 0.71 0.0531233569800657 Beta 1.05 -0.01428-2.11428 1.05 -0.01428-2.11428 0.397 -0.42816-1.22216 0.397 -0.42816-1.22216 0.624 0.05364-1.19436 0.624 0.05364-1.19436 0.343 -0.07448-0.76048 0.343 -0.07448-0.76048 0.306 0.012-0.6 0.306 0.012-0.6 0.205 -0.14976-0.55976 0.257 0.15 -0.20084-0.50084 0.402 0.321 -0.0318-0.6738 0.0747 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 1.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003286/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214320108127603 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-raw-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_30720-raw_DBSLMM_MGI-Freeze3_20211120 30720-raw Cystatin C (mg/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7451726 0.69 0.0362509146219576 Beta 1.04 -0.0184-2.0984 1.04 -0.0184-2.0984 0.371 -0.45808-1.20008 0.371 -0.45808-1.20008 0.544 -0.02244-1.11044 0.544 -0.02244-1.11044 0.308 -0.12124-0.73724 0.308 -0.12124-0.73724 0.16 -0.13792-0.45792 0.16 -0.13792-0.45792 0.0193 -0.36878-0.40738 0.922 0.0105 -0.3521-0.3731 0.955 0.0605 -0.32954-0.45054 0.761 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003287/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214257514142174 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-raw-prscs-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-raw-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-CystatinC_30720-raw_PRSCS_MGI-Freeze3_20211120 30720-raw Cystatin C (mg/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 0.82 0.0709418651687208 Beta 0.559 -0.5092-1.6272 0.559 -0.5092-1.6272 0.445 -0.39388-1.28388 0.445 -0.39388-1.28388 0.53 -0.058-1.118 0.53 -0.058-1.118 0.497 0.0364-0.9576 0.497 0.0364-0.9576 0.296 -0.01172-0.60372 0.296 -0.01172-0.60372 -0.0458 -0.42408-0.33248 0.812 0.132 -0.23256-0.49656 0.478 0.263 -0.17016-0.69616 0.234 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003288/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214504966502356 normal_range 0.6 1 exprsweb-egfr-cystatinc-30720-raw-lassosum-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-30720-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_30720-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_30720-raw_LASSOSUM_MGI-Freeze3_20211120 30720-raw Cystatin C (mg/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 735756 0.69 0.0683873688670981 Beta 0.916 -0.15808-1.99008 0.916 -0.15808-1.99008 0.542 -0.30668-1.39068 0.542 -0.30668-1.39068 0.997 0.41684-1.57716 0.997 0.41684-1.57716 0.491 0.0402-0.9418 0.491 0.0402-0.9418 0.286 -0.0276-0.5996 0.286 -0.0276-0.5996 0.169 -0.22888-0.56688 0.405 0.0109 -0.32818-0.34998 0.95 0.285 -0.17168-0.74168 0.222 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 s=0.9;Lambda=0.00428 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003284/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_30720-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_30720-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.21425861334053 normal_range 0.6 1 exprsweb-glucose-30740-irnt-pt-mgi-freeze3-20211120 exprsweb-glucose-30740-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Glucose_30740-irnt_PT_MGI-Freeze3_20211120 30740-irnt Glucose (quantile) Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 4535 2.1e-76 0.0139768922422348 Beta 0.343 0.253428-0.432572 0.343 0.253428-0.432572 0.254 0.1903-0.3177 0.254 0.1903-0.3177 0.244 0.203036-0.284964 0.244 0.203036-0.284964 0.225 0.195208-0.254792 0.225 0.195208-0.254792 0.196 0.17542-0.21658 0.196 0.17542-0.21658 0.107 0.0825-0.1315 1.15e-17 0.188 0.163108-0.212892 6.83e-50 0.294 0.26852-0.31948 7.38e-114 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 1.26e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002935/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 306.861489652782 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-irnt-plink-mgi-freeze3-20211120 exprsweb-glucose-30740-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Glucose_30740-irnt_PLINK_MGI-Freeze3_20211120 30740-irnt Glucose (quantile) Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 4405 3.2e-74 0.0140468710168781 Beta 0.304 0.214428-0.393572 0.304 0.214428-0.393572 0.273 0.2093-0.3367 0.273 0.2093-0.3367 0.24 0.199036-0.280964 0.24 0.199036-0.280964 0.219 0.189208-0.248792 0.219 0.189208-0.248792 0.192 0.17142-0.21258 0.192 0.17142-0.21258 0.112 0.087304-0.136696 6.88e-19 0.189 0.164108-0.213892 1.82e-50 0.293 0.26752-0.31848 5.27e-113 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 1.26e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002936/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 307.009809118674 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-glucose-30740-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Glucose_30740-irnt_DBSLMM_MGI-Freeze3_20211120 30740-irnt Glucose (quantile) Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7600988 2.5e-41 0.00804083812775815 Beta 0.257 0.167428-0.346572 0.257 0.167428-0.346572 0.246 0.1823-0.3097 0.246 0.1823-0.3097 0.187 0.146036-0.227964 0.187 0.146036-0.227964 0.18 0.150208-0.209792 0.18 0.150208-0.209792 0.16 0.13942-0.18058 0.16 0.13942-0.18058 0.0857 0.060808-0.110592 1.61e-11 0.137 0.112108-0.161892 4.61e-27 0.233 0.207324-0.258676 3.46e-71 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002937/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 309.262584928574 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-irnt-prscs-mgi-freeze3-20211120 exprsweb-glucose-30740-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Glucose_30740-irnt_PRSCS_MGI-Freeze3_20211120 30740-irnt Glucose (quantile) Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113830 1.5e-91 0.0178138610663825 Beta 0.368 0.278232-0.457768 0.368 0.278232-0.457768 0.295 0.231104-0.358896 0.295 0.231104-0.358896 0.254 0.21284-0.29516 0.254 0.21284-0.29516 0.277 0.247208-0.306792 0.277 0.247208-0.306792 0.235 0.214224-0.255776 0.235 0.214224-0.255776 0.113 0.088304-0.137696 2.51e-19 0.201 0.176108-0.225892 1.75e-56 0.339 0.313128-0.364872 2.3e-145 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002938/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 305.83555698026 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-irnt-lassosum-mgi-freeze3-20211120 exprsweb-glucose-30740-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Glucose_30740-irnt_LASSOSUM_MGI-Freeze3_20211120 30740-irnt Glucose (quantile) Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 513495 5.4e-90 0.017016625418381 Beta 0.353 0.263232-0.442768 0.353 0.263232-0.442768 0.31 0.246104-0.373896 0.31 0.246104-0.373896 0.287 0.24584-0.32816 0.287 0.24584-0.32816 0.253 0.223208-0.282792 0.253 0.223208-0.282792 0.222 0.201224-0.242776 0.222 0.201224-0.242776 0.111 0.0865-0.1355 5.38e-19 0.202 0.177108-0.226892 8.9e-57 0.333 0.307324-0.358676 8.66e-142 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 s=0.9;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002934/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 305.940848792878 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-raw-pt-mgi-freeze3-20211120 exprsweb-glucose-30740-raw-pt-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Glucose_30740-raw_PT_MGI-Freeze3_20211120 30740-raw Glucose (mmol/L) Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1080 3.8e-61 0.0175557150989809 Beta 0.243 0.153036-0.332964 0.243 0.153036-0.332964 0.261 0.196712-0.325288 0.261 0.196712-0.325288 0.25 0.208448-0.291552 0.25 0.208448-0.291552 0.232 0.20162-0.26238 0.232 0.20162-0.26238 0.213 0.191832-0.234168 0.213 0.191832-0.234168 0.112 0.087696-0.136304 1.88e-19 0.184 0.158912-0.209088 1.01e-46 0.311 0.284148-0.337852 1.05e-113 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002940/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 307.90220950595 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-raw-plink-mgi-freeze3-20211120 exprsweb-glucose-30740-raw-plink-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Glucose_30740-raw_PLINK_MGI-Freeze3_20211120 30740-raw Glucose (mmol/L) Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1049 1.5e-62 0.0170904970922343 Beta 0.223 0.13284-0.31316 0.223 0.13284-0.31316 0.263 0.198712-0.327288 0.263 0.198712-0.327288 0.253 0.211252-0.294748 0.253 0.211252-0.294748 0.241 0.21062-0.27138 0.241 0.21062-0.27138 0.216 0.194832-0.237168 0.216 0.194832-0.237168 0.114 0.0895-0.1385 8.91e-20 0.186 0.161108-0.210892 2.95e-48 0.319 0.292148-0.345852 6.41e-119 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002941/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 307.806827473185 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-raw-dbslmm-mgi-freeze3-20211120 exprsweb-glucose-30740-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Glucose_30740-raw_DBSLMM_MGI-Freeze3_20211120 30740-raw Glucose (mmol/L) Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7600988 2e-31 0.0066061310086217 Beta 0.227 0.137232-0.316768 0.227 0.137232-0.316768 0.218 0.154104-0.281896 0.218 0.154104-0.281896 0.198 0.15684-0.23916 0.198 0.15684-0.23916 0.155 0.125012-0.184988 0.155 0.125012-0.184988 0.134 0.113224-0.154776 0.134 0.113224-0.154776 0.0811 0.0566-0.1056 7.99e-11 0.113 0.088108-0.137892 4.27e-19 0.2 0.174324-0.225676 1.33e-52 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002942/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 309.945198870489 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-raw-prscs-mgi-freeze3-20211120 exprsweb-glucose-30740-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Glucose_30740-raw_PRSCS_MGI-Freeze3_20211120 30740-raw Glucose (mmol/L) Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113830 8.4e-112 0.019620662098703 Beta 0.358 0.267056-0.448944 0.358 0.267056-0.448944 0.32 0.254928-0.385072 0.32 0.254928-0.385072 0.317 0.274664-0.359336 0.317 0.274664-0.359336 0.281 0.250032-0.311968 0.281 0.250032-0.311968 0.265 0.24344-0.28656 0.265 0.24344-0.28656 0.116 0.091892-0.140108 7.08e-21 0.22 0.195108-0.244892 5.24e-67 0.383 0.355168-0.410832 4.42e-161 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002943/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 304.473354986159 normal_range 0.01 140 mg/dl exprsweb-glucose-30740-raw-lassosum-mgi-freeze3-20211120 exprsweb-glucose-30740-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Glucose_30740-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Glucose_30740-raw_LASSOSUM_MGI-Freeze3_20211120 30740-raw Glucose (mmol/L) Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 444825 4.5e-84 0.0184965209417475 Beta 0.331 0.240252-0.421748 0.331 0.240252-0.421748 0.292 0.226928-0.357072 0.292 0.226928-0.357072 0.269 0.226664-0.311336 0.269 0.226664-0.311336 0.25 0.219032-0.280968 0.25 0.219032-0.280968 0.229 0.20744-0.25056 0.229 0.20744-0.25056 0.117 0.093088-0.140912 1.42e-21 0.205 0.179716-0.230284 3.09e-57 0.348 0.320364-0.375636 2.83e-135 TRUE FALSE FALSE TRUE Both 20401 0 GRCh37/hg19 s=0.5;Lambda=0.00428 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002939/ScoringFiles/ phewas/ExPRSweb_Glucose_30740-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Glucose_30740-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 306.341450483452 normal_range 0.01 140 mg/dl exprsweb-hdl-30760-irnt-pt-mgi-freeze3-20211120 exprsweb-hdl-30760-irnt-pt-mgi-freeze3-20211120 ExPRSweb_HDL_30760-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_HDL_30760-irnt_PT_MGI-Freeze3_20211120 30760-irnt HDL cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 16393 4.6e-263 0.0874439161702711 Beta 0.858 0.726876-0.989124 0.858 0.726876-0.989124 0.761 0.6679-0.8541 0.761 0.6679-0.8541 0.706 0.646612-0.765388 0.706 0.646612-0.765388 0.608 0.565076-0.650924 0.608 0.565076-0.650924 0.507 0.477404-0.536596 0.507 0.477404-0.536596 0.282 0.247896-0.316104 4.31e-59 0.497 0.462112-0.531888 1.33e-170 0.773 0.73674-0.80926 1e-381 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 3.98e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002955/ScoringFiles/ phewas/ExPRSweb_HDL_30760-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 144.214836894067 normal_range 60 10000 exprsweb-hdl-30760-irnt-plink-mgi-freeze3-20211120 exprsweb-hdl-30760-irnt-plink-mgi-freeze3-20211120 ExPRSweb_HDL_30760-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_HDL_30760-irnt_PLINK_MGI-Freeze3_20211120 30760-irnt HDL cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 25134 4.9e-256 0.0879458773505566 Beta 0.824 0.692876-0.955124 0.824 0.692876-0.955124 0.731 0.6379-0.8241 0.731 0.6379-0.8241 0.628 0.568416-0.687584 0.628 0.568416-0.687584 0.567 0.52388-0.61012 0.567 0.52388-0.61012 0.509 0.479404-0.538596 0.509 0.479404-0.538596 0.275 0.2407-0.3093 9.49e-56 0.501 0.466112-0.535888 5.46e-174 0.778 0.74174-0.81426 1e-385 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 3.98e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002956/ScoringFiles/ phewas/ExPRSweb_HDL_30760-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 144.660067666909 normal_range 60 10000 exprsweb-hdl-30760-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-hdl-30760-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_HDL_30760-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_HDL_30760-irnt_DBSLMM_MGI-Freeze3_20211120 30760-irnt HDL cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7449065 2.4e-283 0.0968020829830786 Beta 0.934 0.803072-1.064928 0.934 0.803072-1.064928 0.793 0.6999-0.8861 0.793 0.6999-0.8861 0.695 0.635612-0.754388 0.695 0.635612-0.754388 0.604 0.561076-0.646924 0.604 0.561076-0.646924 0.533 0.5036-0.5624 0.533 0.5036-0.5624 0.283 0.249288-0.316712 1.33e-60 0.509 0.474308-0.543692 2.85e-181 0.803 0.766936-0.839064 1e-414 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002957/ScoringFiles/ phewas/ExPRSweb_HDL_30760-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 142.945307358583 normal_range 60 10000 exprsweb-hdl-30760-irnt-prscs-mgi-freeze3-20211120 exprsweb-hdl-30760-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_HDL_30760-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_HDL_30760-irnt_PRSCS_MGI-Freeze3_20211120 30760-irnt HDL cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113830 1.3e-294 0.0885388016160969 Beta 0.841 0.709876-0.972124 0.841 0.709876-0.972124 0.793 0.6999-0.8861 0.793 0.6999-0.8861 0.689 0.629416-0.748584 0.689 0.629416-0.748584 0.615 0.57188-0.65812 0.615 0.57188-0.65812 0.55 0.520404-0.579596 0.55 0.520404-0.579596 0.293 0.259092-0.326908 5.34e-64 0.515 0.479916-0.550084 9.18e-182 0.826 0.788956-0.863044 1e-414 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002958/ScoringFiles/ phewas/ExPRSweb_HDL_30760-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 142.249648246102 normal_range 60 10000 exprsweb-hdl-30760-irnt-lassosum-mgi-freeze3-20211120 exprsweb-hdl-30760-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_HDL_30760-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_HDL_30760-irnt_LASSOSUM_MGI-Freeze3_20211120 30760-irnt HDL cholesterol (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 815573 4.3e-245 0.0791124942025449 Beta 0.916 0.784876-1.047124 0.916 0.784876-1.047124 0.766 0.6729-0.8591 0.766 0.6729-0.8591 0.637 0.577416-0.696584 0.637 0.577416-0.696584 0.593 0.54988-0.63612 0.593 0.54988-0.63612 0.497 0.467208-0.526792 0.497 0.467208-0.526792 0.273 0.238504-0.307496 2.15e-54 0.485 0.449524-0.520476 3.31e-158 0.761 0.72376-0.79824 1e-349 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 s=0.9;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002954/ScoringFiles/ phewas/ExPRSweb_HDL_30760-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 145.35906611962 normal_range 60 10000 exprsweb-hdl-30760-raw-pt-mgi-freeze3-20211120 exprsweb-hdl-30760-raw-pt-mgi-freeze3-20211120 ExPRSweb_HDL_30760-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_HDL_30760-raw_PT_MGI-Freeze3_20211120 30760-raw HDL cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 17935 1.2e-254 0.0845514148788201 Beta 0.806 0.674876-0.937124 0.806 0.674876-0.937124 0.757 0.6639-0.8501 0.757 0.6639-0.8501 0.671 0.611416-0.730584 0.671 0.611416-0.730584 0.588 0.54488-0.63112 0.588 0.54488-0.63112 0.509 0.479404-0.538596 0.509 0.479404-0.538596 0.281 0.2467-0.3153 4.77e-58 0.473 0.437916-0.508084 2.02e-154 0.768 0.731544-0.804456 1e-371 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002960/ScoringFiles/ phewas/ExPRSweb_HDL_30760-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 144.748563031668 normal_range 60 10000 exprsweb-hdl-30760-raw-plink-mgi-freeze3-20211120 exprsweb-hdl-30760-raw-plink-mgi-freeze3-20211120 ExPRSweb_HDL_30760-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_HDL_30760-raw_PLINK_MGI-Freeze3_20211120 30760-raw HDL cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 28354 1.3e-247 0.084010978102708 Beta 0.775 0.643876-0.906124 0.775 0.643876-0.906124 0.67 0.576704-0.763296 0.67 0.576704-0.763296 0.604 0.544416-0.663584 0.604 0.544416-0.663584 0.564 0.52088-0.60712 0.564 0.52088-0.60712 0.502 0.472208-0.531792 0.502 0.472208-0.531792 0.279 0.2447-0.3133 6.38e-57 0.496 0.461112-0.530888 4.97e-171 0.765 0.728348-0.801652 1e-365 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002961/ScoringFiles/ phewas/ExPRSweb_HDL_30760-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 145.197320358804 normal_range 60 10000 exprsweb-hdl-30760-raw-dbslmm-mgi-freeze3-20211120 exprsweb-hdl-30760-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_HDL_30760-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_HDL_30760-raw_DBSLMM_MGI-Freeze3_20211120 30760-raw HDL cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7449036 2e-268 0.0922747517318195 Beta 0.892 0.760876-1.023124 0.892 0.760876-1.023124 0.749 0.6559-0.8421 0.749 0.6559-0.8421 0.671 0.611416-0.730584 0.671 0.611416-0.730584 0.591 0.548076-0.633924 0.591 0.548076-0.633924 0.525 0.495404-0.554596 0.525 0.495404-0.554596 0.29 0.256092-0.323908 1.09e-62 0.493 0.458308-0.527692 8.48e-170 0.791 0.75474-0.82726 1e-399 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002962/ScoringFiles/ phewas/ExPRSweb_HDL_30760-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.876621949061 normal_range 60 10000 exprsweb-hdl-30760-raw-prscs-mgi-freeze3-20211120 exprsweb-hdl-30760-raw-prscs-mgi-freeze3-20211120 ExPRSweb_HDL_30760-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_HDL_30760-raw_PRSCS_MGI-Freeze3_20211120 30760-raw HDL cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113830 4.2e-291 0.0884151593455864 Beta 0.809 0.67768-0.94032 0.809 0.67768-0.94032 0.781 0.6879-0.8741 0.781 0.6879-0.8741 0.68 0.620416-0.739584 0.68 0.620416-0.739584 0.629 0.58588-0.67212 0.629 0.58588-0.67212 0.545 0.515404-0.574596 0.545 0.515404-0.574596 0.291 0.257092-0.324908 4.19e-63 0.515 0.479916-0.550084 2.03e-182 0.821 0.784152-0.857848 1e-416 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002963/ScoringFiles/ phewas/ExPRSweb_HDL_30760-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 142.466002627066 normal_range 60 10000 exprsweb-hdl-30760-raw-lassosum-mgi-freeze3-20211120 exprsweb-hdl-30760-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_HDL_30760-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_HDL_30760-raw_LASSOSUM_MGI-Freeze3_20211120 30760-raw HDL cholesterol (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 799981 1.7e-242 0.077783725190269 Beta 0.869 0.737876-1.000124 0.869 0.737876-1.000124 0.772 0.6789-0.8651 0.772 0.6789-0.8651 0.662 0.602416-0.721584 0.662 0.602416-0.721584 0.57 0.52688-0.61312 0.57 0.52688-0.61312 0.482 0.452208-0.511792 0.482 0.452208-0.511792 0.254 0.219504-0.288496 7.76e-47 0.494 0.458524-0.529476 3.58e-163 0.74 0.70276-0.77724 1e-331 TRUE FALSE FALSE TRUE Both 9320 0 GRCh37/hg19 s=0.9;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002959/ScoringFiles/ phewas/ExPRSweb_HDL_30760-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_HDL_30760-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 145.524797511208 normal_range 60 10000 exprsweb-ldl-30780-irnt-pt-mgi-freeze3-20211120 exprsweb-ldl-30780-irnt-pt-mgi-freeze3-20211120 ExPRSweb_LDL_30780-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_LDL_30780-irnt_PT_MGI-Freeze3_20211120 30780-irnt LDL direct (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2066 5.7e-138 0.0621755423991653 Beta 0.532 0.390096-0.673904 0.532 0.390096-0.673904 0.566 0.465256-0.666744 0.566 0.465256-0.666744 0.48 0.41532-0.54468 0.48 0.41532-0.54468 0.436 0.389156-0.482844 0.436 0.389156-0.482844 0.4 0.367856-0.432144 0.4 0.367856-0.432144 0.292 0.254368-0.329632 5.41e-52 0.435 0.396388-0.473612 1.14e-108 0.642 0.602604-0.681396 2.69e-223 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 1.26e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003030/ScoringFiles/ phewas/ExPRSweb_LDL_30780-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 736.422223526487 normal_range 0.01 100 exprsweb-ldl-30780-irnt-plink-mgi-freeze3-20211120 exprsweb-ldl-30780-irnt-plink-mgi-freeze3-20211120 ExPRSweb_LDL_30780-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_LDL_30780-irnt_PLINK_MGI-Freeze3_20211120 30780-irnt LDL direct (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2609 2.8e-144 0.0644375864582933 Beta 0.525 0.383096-0.666904 0.525 0.383096-0.666904 0.517 0.416256-0.617744 0.517 0.416256-0.617744 0.472 0.40732-0.53668 0.472 0.40732-0.53668 0.45 0.403352-0.496648 0.45 0.403352-0.496648 0.396 0.363856-0.428144 0.396 0.363856-0.428144 0.287 0.249368-0.324632 2.13e-50 0.445 0.406388-0.483612 1.24e-112 0.639 0.599604-0.678396 3.41e-221 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 1.26e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003031/ScoringFiles/ phewas/ExPRSweb_LDL_30780-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 734.269891323113 normal_range 0.01 100 exprsweb-ldl-30780-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-ldl-30780-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_LDL_30780-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_LDL_30780-irnt_DBSLMM_MGI-Freeze3_20211120 30780-irnt LDL direct (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7457930 1.9e-159 0.067598219703027 Beta 0.515 0.373096-0.656904 0.515 0.373096-0.656904 0.466 0.365256-0.566744 0.466 0.365256-0.566744 0.509 0.444516-0.573484 0.509 0.444516-0.573484 0.452 0.405156-0.498844 0.452 0.405156-0.498844 0.417 0.384856-0.449144 0.417 0.384856-0.449144 0.287 0.248976-0.325024 1.34e-49 0.449 0.410584-0.487416 3.29e-116 0.659 0.619408-0.698592 3.28e-234 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003032/ScoringFiles/ phewas/ExPRSweb_LDL_30780-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 729.146059229019 normal_range 0.01 100 exprsweb-ldl-30780-irnt-prscs-mgi-freeze3-20211120 exprsweb-ldl-30780-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_LDL_30780-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_LDL_30780-irnt_PRSCS_MGI-Freeze3_20211120 30780-irnt LDL direct (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113830 1.2e-147 0.070450178649444 Beta 0.715 0.573292-0.856708 0.715 0.573292-0.856708 0.628 0.527452-0.728548 0.628 0.527452-0.728548 0.515 0.450516-0.579484 0.515 0.450516-0.579484 0.441 0.394156-0.487844 0.441 0.394156-0.487844 0.419 0.386856-0.451144 0.419 0.386856-0.451144 0.291 0.253172-0.328828 1.36e-51 0.432 0.393192-0.470808 1.54e-105 0.661 0.621212-0.700788 1.34e-232 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003033/ScoringFiles/ phewas/ExPRSweb_LDL_30780-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 733.123689240098 normal_range 0.01 100 exprsweb-ldl-30780-irnt-lassosum-mgi-freeze3-20211120 exprsweb-ldl-30780-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_LDL_30780-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_LDL_30780-irnt_LASSOSUM_MGI-Freeze3_20211120 30780-irnt LDL direct (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 549112 1.3e-134 0.0609810991810339 Beta 0.599 0.457096-0.740904 0.599 0.457096-0.740904 0.55 0.449256-0.650744 0.55 0.449256-0.650744 0.478 0.41332-0.54268 0.478 0.41332-0.54268 0.424 0.377156-0.470844 0.424 0.377156-0.470844 0.393 0.36066-0.42534 0.393 0.36066-0.42534 0.273 0.234976-0.311024 6.37e-45 0.418 0.379192-0.456808 6.73e-99 0.624 0.584604-0.663396 2.98e-212 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 s=0.9;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003029/ScoringFiles/ phewas/ExPRSweb_LDL_30780-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 737.569674479853 normal_range 0.01 100 exprsweb-ldl-30780-raw-pt-mgi-freeze3-20211120 exprsweb-ldl-30780-raw-pt-mgi-freeze3-20211120 ExPRSweb_LDL_30780-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_LDL_30780-raw_PT_MGI-Freeze3_20211120 30780-raw LDL direct (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2288 6.9e-139 0.0623967859553438 Beta 0.581 0.439096-0.722904 0.581 0.439096-0.722904 0.546 0.445256-0.646744 0.546 0.445256-0.646744 0.478 0.41332-0.54268 0.478 0.41332-0.54268 0.449 0.402156-0.495844 0.449 0.402156-0.495844 0.397 0.364856-0.429144 0.397 0.364856-0.429144 0.269 0.231368-0.306632 2.35e-44 0.424 0.385388-0.462612 5.11e-103 0.627 0.587604-0.666396 1.42e-212 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 1.58e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003035/ScoringFiles/ phewas/ExPRSweb_LDL_30780-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 736.108695356152 normal_range 0.01 100 exprsweb-ldl-30780-raw-plink-mgi-freeze3-20211120 exprsweb-ldl-30780-raw-plink-mgi-freeze3-20211120 ExPRSweb_LDL_30780-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_LDL_30780-raw_PLINK_MGI-Freeze3_20211120 30780-raw LDL direct (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 2935 6.5e-142 0.0647073270203708 Beta 0.518 0.376096-0.659904 0.518 0.376096-0.659904 0.515 0.414256-0.615744 0.515 0.414256-0.615744 0.485 0.420516-0.549484 0.485 0.420516-0.549484 0.444 0.397156-0.490844 0.444 0.397156-0.490844 0.398 0.365856-0.430144 0.398 0.365856-0.430144 0.281 0.243172-0.318828 2.17e-48 0.441 0.402584-0.479416 8.53e-112 0.637 0.597408-0.676592 1.76e-217 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 1.58e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003036/ScoringFiles/ phewas/ExPRSweb_LDL_30780-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 735.076086499474 normal_range 0.01 100 exprsweb-ldl-30780-raw-dbslmm-mgi-freeze3-20211120 exprsweb-ldl-30780-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_LDL_30780-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_LDL_30780-raw_DBSLMM_MGI-Freeze3_20211120 30780-raw LDL direct (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 8918470 4.1e-174 0.0758186293037162 Beta 0.645 0.503292-0.786708 0.645 0.503292-0.786708 0.615 0.514452-0.715548 0.615 0.514452-0.715548 0.518 0.453516-0.582484 0.518 0.453516-0.582484 0.483 0.436352-0.529648 0.483 0.436352-0.529648 0.444 0.411856-0.476144 0.444 0.411856-0.476144 0.283 0.245172-0.320828 1.27e-48 0.462 0.42378-0.50022 1.65e-124 0.691 0.6518-0.7302 9.51999999999999e-263 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003037/ScoringFiles/ phewas/ExPRSweb_LDL_30780-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 724.264133675264 normal_range 0.01 100 exprsweb-ldl-30780-raw-prscs-mgi-freeze3-20211120 exprsweb-ldl-30780-raw-prscs-mgi-freeze3-20211120 ExPRSweb_LDL_30780-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_LDL_30780-raw_PRSCS_MGI-Freeze3_20211120 30780-raw LDL direct (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113830 1.9e-149 0.0703350663092208 Beta 0.662 0.520292-0.803708 0.662 0.520292-0.803708 0.628 0.527452-0.728548 0.628 0.527452-0.728548 0.526 0.461516-0.590484 0.526 0.461516-0.590484 0.455 0.408156-0.501844 0.455 0.408156-0.501844 0.418 0.385856-0.450144 0.418 0.385856-0.450144 0.274 0.236172-0.311828 6.51e-46 0.427 0.387996-0.466004 1.15e-102 0.653 0.613408-0.692592 7.28e-229 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003038/ScoringFiles/ phewas/ExPRSweb_LDL_30780-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 732.514996730623 normal_range 0.01 100 exprsweb-ldl-30780-raw-lassosum-mgi-freeze3-20211120 exprsweb-ldl-30780-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_LDL_30780-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_LDL_30780-raw_LASSOSUM_MGI-Freeze3_20211120 30780-raw LDL direct (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 552845 1e-134 0.0610746214086582 Beta 0.562 0.420096-0.703904 0.562 0.420096-0.703904 0.555 0.454256-0.655744 0.555 0.454256-0.655744 0.468 0.40332-0.53268 0.468 0.40332-0.53268 0.433 0.386156-0.479844 0.433 0.386156-0.479844 0.389 0.35666-0.42134 0.389 0.35666-0.42134 0.256 0.217976-0.294024 9.26e-40 0.414 0.375192-0.452808 2.58e-97 0.613 0.573604-0.652396 1.28e-203 TRUE FALSE FALSE TRUE Both 9288 0 GRCh37/hg19 s=0.9;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003034/ScoringFiles/ phewas/ExPRSweb_LDL_30780-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_LDL_30780-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 737.539493631483 normal_range 0.01 100 exprsweb-estradiol-oestradiol-30800-irnt-pt-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Estradiol-Oestradiol_30800-irnt_PT_MGI-Freeze3_20211120 30800-irnt Oestradiol (quantile) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 4661 0.16 0.0014226119497336 Beta 0.0146 -0.43032-0.45952 0.0146 -0.43032-0.45952 -0.0512 -0.36872-0.26632 -0.0512 -0.36872-0.26632 -0.134 -0.33784-0.06984 -0.134 -0.33784-0.06984 -0.0851 -0.233472-0.063272 -0.0851 -0.233472-0.063272 -0.0505 -0.153596-0.052596 -0.0505 -0.153596-0.052596 -0.0286 -0.154824-0.097624 0.657 -0.0718 -0.193908-0.050308 0.249 -0.0782 -0.205992-0.049592 0.23 FALSE TRUE FALSE TRUE Both 937 0 GRCh37/hg19 3.16e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002915/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2519.40475623802 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-irnt-plink-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Estradiol-Oestradiol_30800-irnt_PLINK_MGI-Freeze3_20211120 30800-irnt Oestradiol (quantile) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 9583 0.24 0.00255254538371002 Beta 0.114 -0.32896-0.55696 0.114 -0.32896-0.55696 -0.0461 -0.35382-0.26162 -0.0461 -0.35382-0.26162 0.056 -0.119616-0.231616 0.056 -0.119616-0.231616 0.109 -0.039176-0.257176 0.109 -0.039176-0.257176 0.0534 -0.049108-0.155908 0.0534 -0.049108-0.155908 0.0837 -0.056244-0.223644 0.241 0.0467 -0.113628-0.207028 0.568 0.09 -0.05798-0.23798 0.234 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 2.00e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002916/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2520.87870785895 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Estradiol-Oestradiol_30800-irnt_DBSLMM_MGI-Freeze3_20211120 30800-irnt Oestradiol (quantile) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10287664 0.2 0.000118976163947611 Beta 0.181 -0.26196-0.62396 0.181 -0.26196-0.62396 0.113 -0.20256-0.42856 0.113 -0.20256-0.42856 -0.0178 -0.22164-0.18604 -0.0178 -0.22164-0.18604 0.0429 -0.105864-0.191664 0.0429 -0.105864-0.191664 0.0275 -0.076184-0.131184 0.0275 -0.076184-0.131184 0.0756 -0.051604-0.202804 0.244 0.0178 -0.105092-0.140692 0.777 0.0573 -0.0701-0.1847 0.378 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002917/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2520.1233307561 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-irnt-prscs-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Estradiol-Oestradiol_30800-irnt_PRSCS_MGI-Freeze3_20211120 30800-irnt Oestradiol (quantile) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113823 0.27 0.00154800064456696 Beta 0.0178 -0.42712-0.46272 0.0178 -0.42712-0.46272 0.0208 -0.29476-0.33636 0.0208 -0.29476-0.33636 0.0799 -0.12394-0.28374 0.0799 -0.12394-0.28374 0.0847 -0.064064-0.233464 0.0847 -0.064064-0.233464 0.0664 -0.037284-0.170084 0.0664 -0.037284-0.170084 0.133 0.008148-0.257852 0.0369 0.072 -0.047756-0.191756 0.239 0.143 0.01854-0.26746 0.0242 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002918/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2521.38233916113 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-irnt-lassosum-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Estradiol-Oestradiol_30800-irnt_LASSOSUM_MGI-Freeze3_20211120 30800-irnt Oestradiol (quantile) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 326223 0.25 0.00365895983179286 Beta 0.489 0.04408-0.93392 0.489 0.04408-0.93392 0.457 0.14144-0.77256 0.457 0.14144-0.77256 0.286 0.0802-0.4918 0.286 0.0802-0.4918 0.183 0.033452-0.332548 0.183 0.033452-0.332548 0.132 0.02714-0.23686 0.132 0.02714-0.23686 0.00306 -0.121204-0.127324 0.962 -0.0735 -0.201096-0.054096 0.259 0.14 -0.008372-0.288372 0.0644 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 s=1;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002914/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2521.03195636126 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-raw-pt-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-raw-pt-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Estradiol-Oestradiol_30800-raw_PT_MGI-Freeze3_20211120 30800-raw Oestradiol (pmol/L) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 4 0.75 0.005590582043626 Beta -0.0334 -0.47832-0.41152 -0.0334 -0.47832-0.41152 -0.058 -0.37356-0.25756 -0.058 -0.37356-0.25756 0.144 -0.05984-0.34784 0.144 -0.05984-0.34784 0.0863 -0.062072-0.234672 0.0863 -0.062072-0.234672 0.0504 -0.052304-0.153104 0.0504 -0.052304-0.153104 0.186 0.063696-0.308304 0.0029 0.0927 -0.025096-0.210496 0.123 0.135 0.014068-0.255932 0.028 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 2.00e-07 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002920/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2524.41994468416 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-raw-plink-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-raw-plink-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Estradiol-Oestradiol_30800-raw_PLINK_MGI-Freeze3_20211120 30800-raw Oestradiol (pmol/L) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 98 0.8 0.00274788035625956 Beta -0.136 -0.58092-0.30892 -0.136 -0.58092-0.30892 0.0942 -0.22136-0.40976 0.0942 -0.22136-0.40976 0.139 -0.0668-0.3448 0.139 -0.0668-0.3448 0.169 0.019452-0.318548 0.169 0.019452-0.318548 0.0889 -0.014784-0.192584 0.0889 -0.014784-0.192584 -0.0624 -0.179608-0.054808 0.296 -0.0331 -0.161872-0.095672 0.615 0.0425 -0.092348-0.177348 0.537 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 1.58e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002921/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2524.51133302165 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-raw-dbslmm-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Estradiol-Oestradiol_30800-raw_DBSLMM_MGI-Freeze3_20211120 30800-raw Oestradiol (pmol/L) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10287670 0.45 0.000620943651794767 Beta -0.0837 -0.52862-0.36122 -0.0837 -0.52862-0.36122 0.0793 -0.23822-0.39682 0.0793 -0.23822-0.39682 0.189 -0.01484-0.39284 0.189 -0.01484-0.39284 0.0574 -0.090972-0.205772 0.0574 -0.090972-0.205772 0.0507 -0.052004-0.153404 0.0507 -0.052004-0.153404 0.0837 -0.035272-0.202672 0.168 0.0577 -0.065388-0.180788 0.359 0.0986 -0.030564-0.227764 0.134 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002922/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2523.11476789104 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-raw-prscs-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Estradiol-Oestradiol_30800-raw_PRSCS_MGI-Freeze3_20211120 30800-raw Oestradiol (pmol/L) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113823 0.046 0.00247678608524148 Beta -0.00847 -0.45339-0.43645 -0.00847 -0.45339-0.43645 0.00847 -0.30905-0.32599 0.00847 -0.30905-0.32599 0.168 -0.0378-0.3738 0.168 -0.0378-0.3738 0.14 -0.008764-0.288764 0.14 -0.008764-0.288764 0.0807 -0.022788-0.184188 0.0807 -0.022788-0.184188 -0.00373 -0.121722-0.114262 0.951 0.112 -0.018536-0.242536 0.0919 0.11 -0.021516-0.241516 0.102 TRUE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002923/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2513.84284679423 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-estradiol-oestradiol-30800-raw-lassosum-mgi-freeze3-20211120 exprsweb-estradiol-oestradiol-30800-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Estradiol-Oestradiol_30800-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Estradiol-Oestradiol_30800-raw_LASSOSUM_MGI-Freeze3_20211120 30800-raw Oestradiol (pmol/L) Quantitative Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men. MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 324623 0.27 0.00224039519979051 Beta 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 0.109 0.016488-0.201512 FALSE FALSE FALSE TRUE Both 937 0 GRCh37/hg19 s=0.2;Lambda=0.02336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002919/ScoringFiles/ phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Estradiol-Oestradiol_30800-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2521.43680910513 normal_range pg/ml Stratify by Sex and menopause state, 30 to 400 pg/mL for premenopausal women. 0 to 30 pg/mL for postmenopausal women. 10 to 50 pg/mL for men exprsweb-triglycerides-30870-irnt-pt-mgi-freeze3-20211120 exprsweb-triglycerides-30870-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Triglycerides_30870-irnt_PT_MGI-Freeze3_20211120 30870-irnt Triglycerides (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 9693 1.2e-228 0.0777020582167993 Beta 0.821 0.680076-0.961924 0.821 0.680076-0.961924 0.726 0.625844-0.826156 0.726 0.625844-0.826156 0.663 0.598516-0.727484 0.663 0.598516-0.727484 0.605 0.558156-0.651844 0.605 0.558156-0.651844 0.527 0.494268-0.559732 0.527 0.494268-0.559732 0.292 0.25574-0.32826 4.13e-56 0.496 0.457192-0.534808 1.46e-138 0.803 0.760664-0.845336 4.91e-302 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 1.58e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003145/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2962.05397998654 normal_range 0.01 150 exprsweb-triglycerides-30870-irnt-plink-mgi-freeze3-20211120 exprsweb-triglycerides-30870-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Triglycerides_30870-irnt_PLINK_MGI-Freeze3_20211120 30870-irnt Triglycerides (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 13680 4.8e-240 0.0776156317006419 Beta 0.804 0.663272-0.944728 0.804 0.663272-0.944728 0.7 0.599844-0.800156 0.7 0.599844-0.800156 0.684 0.619712-0.748288 0.684 0.619712-0.748288 0.619 0.572352-0.665648 0.619 0.572352-0.665648 0.539 0.50666-0.57134 0.539 0.50666-0.57134 0.264 0.227544-0.300456 7.86e-46 0.463 0.424584-0.501416 7.29e-123 0.789 0.747252-0.830748 3.11e-300 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 6.31e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003146/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2947.50945319789 normal_range 0.01 150 exprsweb-triglycerides-30870-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-triglycerides-30870-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Triglycerides_30870-irnt_DBSLMM_MGI-Freeze3_20211120 30870-irnt Triglycerides (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 8924773 6.9e-304 0.104631690244544 Beta 0.983 0.842468-1.123532 0.983 0.842468-1.123532 0.867 0.767236-0.966764 0.867 0.767236-0.966764 0.772 0.7083-0.8357 0.772 0.7083-0.8357 0.683 0.63694-0.72906 0.683 0.63694-0.72906 0.598 0.566248-0.629752 0.598 0.566248-0.629752 0.279 0.243916-0.314084 6.74e-55 0.512 0.475152-0.548848 5.17e-163 0.871 0.831408-0.910592 1e-407 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003147/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2868.56935471807 normal_range 0.01 150 exprsweb-triglycerides-30870-irnt-prscs-mgi-freeze3-20211120 exprsweb-triglycerides-30870-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Triglycerides_30870-irnt_PRSCS_MGI-Freeze3_20211120 30870-irnt Triglycerides (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 2e-277 0.0912287374756062 Beta 0.871 0.730468-1.011532 0.871 0.730468-1.011532 0.841 0.741236-0.940764 0.841 0.741236-0.940764 0.738 0.674104-0.801896 0.738 0.674104-0.801896 0.673 0.626744-0.719256 0.673 0.626744-0.719256 0.574 0.541856-0.606144 0.574 0.541856-0.606144 0.275 0.239524-0.310476 5.91e-52 0.512 0.474368-0.549632 8.85e-156 0.845 0.804232-0.885768 1e-361 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003148/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2900.76313453669 normal_range 0.01 150 exprsweb-triglycerides-30870-irnt-lassosum-mgi-freeze3-20211120 exprsweb-triglycerides-30870-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Triglycerides_30870-irnt_LASSOSUM_MGI-Freeze3_20211120 30870-irnt Triglycerides (quantile) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 762608 4.1e-252 0.0848269225662083 Beta 0.848 0.707272-0.988728 0.848 0.707272-0.988728 0.846 0.746236-0.945764 0.846 0.746236-0.945764 0.713 0.648908-0.777092 0.713 0.648908-0.777092 0.652 0.605548-0.698452 0.652 0.605548-0.698452 0.544 0.51166-0.57634 0.544 0.51166-0.57634 0.284 0.248132-0.319868 2.4e-54 0.51 0.472172-0.547828 8.68e-154 0.82 0.779036-0.860964 1e-337 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003144/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2932.26081109681 normal_range 0.01 150 exprsweb-triglycerides-30870-raw-pt-mgi-freeze3-20211120 exprsweb-triglycerides-30870-raw-pt-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Triglycerides_30870-raw_PT_MGI-Freeze3_20211120 30870-raw Triglycerides (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 5113 1.4e-227 0.074949699689402 Beta 0.878 0.737076-1.018924 0.878 0.737076-1.018924 0.738 0.637844-0.838156 0.738 0.637844-0.838156 0.663 0.598516-0.727484 0.663 0.598516-0.727484 0.596 0.548764-0.643236 0.596 0.548764-0.643236 0.518 0.485072-0.550928 0.518 0.485072-0.550928 0.253 0.21674-0.28926 2.44e-42 0.501 0.4618-0.5402 1.53e-138 0.779 0.735292-0.822708 2.81e-268 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 5.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003150/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2963.42946962672 normal_range 0.01 150 exprsweb-triglycerides-30870-raw-plink-mgi-freeze3-20211120 exprsweb-triglycerides-30870-raw-plink-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Triglycerides_30870-raw_PLINK_MGI-Freeze3_20211120 30870-raw Triglycerides (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6730 5.5e-226 0.0741052617338766 Beta 0.838 0.697076-0.978924 0.838 0.697076-0.978924 0.742 0.641844-0.842156 0.742 0.641844-0.842156 0.668 0.603516-0.732484 0.668 0.603516-0.732484 0.592 0.545156-0.638844 0.592 0.545156-0.638844 0.521 0.488268-0.553732 0.521 0.488268-0.553732 0.274 0.23774-0.31026 1.72e-49 0.475 0.4358-0.5142 5.11e-125 0.784 0.741468-0.826532 5.54e-286 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 3.98e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003151/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2965.48332876985 normal_range 0.01 150 exprsweb-triglycerides-30870-raw-dbslmm-mgi-freeze3-20211120 exprsweb-triglycerides-30870-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Triglycerides_30870-raw_DBSLMM_MGI-Freeze3_20211120 30870-raw Triglycerides (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 8924752 3e-291 0.0967021564014304 Beta 0.848 0.707272-0.988728 0.848 0.707272-0.988728 0.858 0.758236-0.957764 0.858 0.758236-0.957764 0.707 0.643104-0.770896 0.707 0.643104-0.770896 0.661 0.614744-0.707256 0.661 0.614744-0.707256 0.587 0.555248-0.618752 0.587 0.555248-0.618752 0.273 0.238112-0.307888 4.8e-53 0.501 0.464152-0.537848 7.94e-157 0.857 0.817408-0.896592 1e-394 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003152/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2883.86769156978 normal_range 0.01 150 exprsweb-triglycerides-30870-raw-prscs-mgi-freeze3-20211120 exprsweb-triglycerides-30870-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Triglycerides_30870-raw_PRSCS_MGI-Freeze3_20211120 30870-raw Triglycerides (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 1.8e-256 0.0875638120437922 Beta 0.973 0.832468-1.113532 0.973 0.832468-1.113532 0.827 0.727236-0.926764 0.827 0.727236-0.926764 0.738 0.674104-0.801896 0.738 0.674104-0.801896 0.645 0.598548-0.691452 0.645 0.598548-0.691452 0.545 0.512856-0.577144 0.545 0.512856-0.577144 0.247 0.211524-0.282476 1.38e-42 0.522 0.48378-0.56022 1.6e-157 0.809 0.768428-0.849572 1e-333 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003153/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2926.80523509055 normal_range 0.01 150 exprsweb-triglycerides-30870-raw-lassosum-mgi-freeze3-20211120 exprsweb-triglycerides-30870-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Triglycerides_30870-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Triglycerides_30870-raw_LASSOSUM_MGI-Freeze3_20211120 30870-raw Triglycerides (mmol/L) Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 705677 4.1e-252 0.0833167277470499 Beta 0.851 0.710272-0.991728 0.851 0.710272-0.991728 0.776 0.67604-0.87596 0.776 0.67604-0.87596 0.732 0.667908-0.796092 0.732 0.667908-0.796092 0.648 0.601548-0.694452 0.648 0.601548-0.694452 0.544 0.51166-0.57634 0.544 0.51166-0.57634 0.261 0.225328-0.296672 2.95e-46 0.485 0.446976-0.523024 2.23e-137 0.805 0.764036-0.845964 1e-323 TRUE FALSE FALSE TRUE Both 9592 0 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003149/ScoringFiles/ phewas/ExPRSweb_Triglycerides_30870-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Triglycerides_30870-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2932.25726268775 normal_range 0.01 150 exprsweb-vitamin-d-30890-irnt-pt-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-D_30890-irnt_PT_MGI-Freeze3_20211120 30890-irnt Vitamin D (quantile) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 495 2.1e-41 0.0214278258212294 Beta 0.249 0.085732-0.412268 0.249 0.085732-0.412268 0.264 0.147968-0.380032 0.264 0.147968-0.380032 0.3 0.22552-0.37448 0.3 0.22552-0.37448 0.29 0.235904-0.344096 0.29 0.235904-0.344096 0.266 0.228564-0.303436 0.266 0.228564-0.303436 0.139 0.094704-0.183296 8.89e-10 0.227 0.18192-0.27208 6.91e-23 0.39 0.34394-0.43606 1.1e-61 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003190/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.0534408475578 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-irnt-plink-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-D_30890-irnt_PLINK_MGI-Freeze3_20211120 30890-irnt Vitamin D (quantile) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 605 3.7e-43 0.024192243453743 Beta 0.281 0.117732-0.444268 0.281 0.117732-0.444268 0.292 0.175968-0.408032 0.292 0.175968-0.408032 0.358 0.28352-0.43248 0.358 0.28352-0.43248 0.321 0.266904-0.375096 0.321 0.266904-0.375096 0.281 0.243564-0.318436 0.281 0.243564-0.318436 0.152 0.107704-0.196296 1.73e-11 0.223 0.178312-0.267688 1.62e-22 0.408 0.361744-0.454256 1.08e-66 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003191/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 78.9638740398459 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-D_30890-irnt_DBSLMM_MGI-Freeze3_20211120 30890-irnt Vitamin D (quantile) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10313259 1.4e-06 0.00471414369111065 Beta 0.157 -0.006268-0.320268 0.157 -0.006268-0.320268 0.165 0.048968-0.281032 0.165 0.048968-0.281032 0.0971 0.022424-0.171776 0.0971 0.022424-0.171776 0.0782 0.023908-0.132492 0.0782 0.023908-0.132492 0.111 0.073368-0.148632 0.111 0.073368-0.148632 0.0763 0.030632-0.121968 0.00107 0.116 0.06994-0.16206 7.54e-07 0.18 0.13394-0.22606 1.72e-14 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003192/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 80.8572578380001 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-irnt-prscs-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-D_30890-irnt_PRSCS_MGI-Freeze3_20211120 30890-irnt Vitamin D (quantile) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 1.2e-42 0.0292429993693776 Beta 0.229 0.065732-0.392268 0.229 0.065732-0.392268 0.266 0.149968-0.382032 0.266 0.149968-0.382032 0.323 0.24852-0.39748 0.323 0.24852-0.39748 0.324 0.269904-0.378096 0.324 0.269904-0.378096 0.26 0.222564-0.297436 0.26 0.222564-0.297436 0.206 0.161704-0.250296 8.33e-20 0.303 0.258704-0.347296 4.69e-41 0.427 0.38094-0.47306 8.15e-74 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003193/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 78.9895319803691 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-irnt-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-D_30890-irnt_LASSOSUM_MGI-Freeze3_20211120 30890-irnt Vitamin D (quantile) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 547654 3.3e-45 0.0254406222768548 Beta 0.385 0.221928-0.548072 0.385 0.221928-0.548072 0.313 0.197164-0.428836 0.313 0.197164-0.428836 0.27 0.19552-0.34448 0.27 0.19552-0.34448 0.281 0.226904-0.335096 0.281 0.226904-0.335096 0.261 0.22376-0.29824 0.261 0.22376-0.29824 0.172 0.1279-0.2161 2.26e-14 0.267 0.22192-0.31208 2.84e-31 0.408 0.362136-0.453864 8.1e-68 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 s=0.5;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003189/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 78.8591480429754 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-raw-pt-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-raw-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-D_30890-raw_PT_MGI-Freeze3_20211120 30890-raw Vitamin D (nmol/L) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 404 4e-44 0.0216736330279204 Beta 0.29 0.126732-0.453268 0.29 0.126732-0.453268 0.288 0.171968-0.404032 0.288 0.171968-0.404032 0.322 0.24752-0.39648 0.322 0.24752-0.39648 0.286 0.231904-0.340096 0.286 0.231904-0.340096 0.256 0.218564-0.293436 0.256 0.218564-0.293436 0.175 0.1309-0.2191 8.61e-15 0.26 0.215508-0.304492 3.32e-30 0.403 0.357136-0.448864 1.22e-66 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 1.58e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003195/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 78.9145954718695 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-raw-plink-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-raw-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-D_30890-raw_PLINK_MGI-Freeze3_20211120 30890-raw Vitamin D (nmol/L) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 500 9e-46 0.0242198253707255 Beta 0.399 0.235732-0.562268 0.399 0.235732-0.562268 0.383 0.267164-0.498836 0.383 0.267164-0.498836 0.344 0.26952-0.41848 0.344 0.26952-0.41848 0.309 0.254904-0.363096 0.309 0.254904-0.363096 0.263 0.225564-0.300436 0.263 0.225564-0.300436 0.189 0.1449-0.2331 4.45e-17 0.271 0.226508-0.315492 7.02e-33 0.415 0.369136-0.460864 9.41e-71 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 1.58e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003196/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 78.8307470748144 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-raw-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-D_30890-raw_DBSLMM_MGI-Freeze3_20211120 30890-raw Vitamin D (nmol/L) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10313258 2.1e-28 0.0150502974953293 Beta 0.19 0.026732-0.353268 0.19 0.026732-0.353268 0.192 0.075968-0.308032 0.192 0.075968-0.308032 0.183 0.108324-0.257676 0.183 0.108324-0.257676 0.186 0.131904-0.240096 0.186 0.131904-0.240096 0.186 0.148564-0.223436 0.186 0.148564-0.223436 0.13 0.08492-0.17508 1.52e-08 0.247 0.201724-0.292276 7.16e-27 0.312 0.266332-0.357668 5.62e-41 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003197/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.7212542627795 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-raw-prscs-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-D_30890-raw_PRSCS_MGI-Freeze3_20211120 30890-raw Vitamin D (nmol/L) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 1.8e-43 0.028508467875827 Beta 0.24 0.076732-0.403268 0.24 0.076732-0.403268 0.281 0.164968-0.397032 0.281 0.164968-0.397032 0.298 0.22352-0.37248 0.298 0.22352-0.37248 0.317 0.262904-0.371096 0.317 0.262904-0.371096 0.274 0.236564-0.311436 0.274 0.236564-0.311436 0.208 0.163704-0.252296 3.81e-20 0.275 0.2309-0.3191 2.43e-34 0.431 0.385136-0.476864 9.62e-76 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003198/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 78.9477997437307 normal_range 20 50 ng/ml exprsweb-vitamin-d-30890-raw-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-d-30890-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-D_30890-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-D_30890-raw_LASSOSUM_MGI-Freeze3_20211120 30890-raw Vitamin D (nmol/L) Quantitative Range unit: ng/ml MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 548161 2.2e-39 0.0264732696726446 Beta 0.317 0.153928-0.480072 0.317 0.153928-0.480072 0.237 0.120968-0.353032 0.237 0.120968-0.353032 0.217 0.14252-0.29148 0.217 0.14252-0.29148 0.239 0.184904-0.293096 0.239 0.184904-0.293096 0.276 0.23876-0.31324 0.276 0.23876-0.31324 0.152 0.1079-0.1961 1.59e-11 0.246 0.20092-0.29108 9.45e-27 0.41 0.363744-0.456256 1.83e-67 TRUE FALSE FALSE TRUE Both 6926 0 GRCh37/hg19 s=0.5;Lambda=0.00428 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003194/ScoringFiles/ phewas/ExPRSweb_Vitamin-D_30890-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-D_30890-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 79.1561457305027 normal_range 20 50 ng/ml exprsweb-diastolic-blood-pressure-4079-irnt-pt-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PT_MGI-Freeze3_20211120 4079-irnt Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 24016 5.6e-120 0.0229160593258162 Beta 0.444 0.3558-0.5322 0.444 0.3558-0.5322 0.343 0.280084-0.405916 0.343 0.280084-0.405916 0.312 0.271232-0.352768 0.312 0.271232-0.352768 0.279 0.249208-0.308792 0.279 0.249208-0.308792 0.263 0.242224-0.283776 0.263 0.242224-0.283776 0.154 0.129304-0.178696 1.08e-34 0.253 0.227324-0.278676 1.58e-83 0.403 0.37556-0.43044 1.65e-181 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002890/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.5689226029449 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-irnt-plink-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PLINK_MGI-Freeze3_20211120 4079-irnt Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 40911 7.9e-111 0.0205904189054101 Beta 0.317 0.228408-0.405592 0.317 0.228408-0.405592 0.345 0.281888-0.408112 0.345 0.281888-0.408112 0.293 0.252232-0.333768 0.293 0.252232-0.333768 0.291 0.261012-0.320988 0.291 0.261012-0.320988 0.256 0.235028-0.276972 0.256 0.235028-0.276972 0.157 0.132108-0.181892 4.04e-35 0.248 0.222128-0.273872 3.45e-79 0.396 0.367972-0.424028 5.02e-168 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 3.98e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002891/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.6503005609832 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Diastolic-blood-Pressure_4079-irnt_DBSLMM_MGI-Freeze3_20211120 4079-irnt Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7477069 7e-113 0.0233997865611455 Beta 0.29 0.2018-0.3782 0.29 0.2018-0.3782 0.282 0.219084-0.344916 0.282 0.219084-0.344916 0.279 0.238428-0.319572 0.279 0.238428-0.319572 0.29 0.260404-0.319596 0.29 0.260404-0.319596 0.266 0.24542-0.28658 0.266 0.24542-0.28658 0.158 0.133304-0.182696 3.76e-36 0.243 0.217716-0.268284 2.03e-79 0.404 0.37754-0.43046 9.98e-198 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002892/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.6319973006085 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-irnt-prscs-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PRSCS_MGI-Freeze3_20211120 4079-irnt Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 1.8e-169 0.029611635298949 Beta 0.386 0.297604-0.474396 0.386 0.297604-0.474396 0.38 0.317084-0.442916 0.38 0.317084-0.442916 0.336 0.295428-0.376572 0.336 0.295428-0.376572 0.335 0.305404-0.364596 0.335 0.305404-0.364596 0.294 0.273224-0.314776 0.294 0.273224-0.314776 0.202 0.1775-0.2265 3.24e-58 0.327 0.30152-0.35248 7.6e-139 0.483 0.455952-0.510048 2.25e-266 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002893/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.1338962337834 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-irnt-lassosum-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Diastolic-blood-Pressure_4079-irnt_LASSOSUM_MGI-Freeze3_20211120 4079-irnt Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 755822 1.1e-149 0.0272358162615769 Beta 0.416 0.3278-0.5042 0.416 0.3278-0.5042 0.393 0.33028-0.45572 0.393 0.33028-0.45572 0.335 0.294624-0.375376 0.335 0.294624-0.375376 0.307 0.2776-0.3364 0.307 0.2776-0.3364 0.277 0.25642-0.29758 0.277 0.25642-0.29758 0.17 0.1455-0.1945 4.21e-42 0.283 0.257912-0.308088 2.45e-107 0.434 0.407932-0.460068 1.78e-233 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 s=0.9;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002889/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.3069485597494 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-raw-pt-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-raw-pt-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Diastolic-blood-Pressure_4079-raw_PT_MGI-Freeze3_20211120 4079-raw Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 15687 1.8e-124 0.0227203900874577 Beta 0.36 0.271604-0.448396 0.36 0.271604-0.448396 0.338 0.274888-0.401112 0.338 0.274888-0.401112 0.31 0.269232-0.350768 0.31 0.269232-0.350768 0.297 0.267208-0.326792 0.297 0.267208-0.326792 0.263 0.242028-0.283972 0.263 0.242028-0.283972 0.155 0.130304-0.179696 1.77e-34 0.258 0.232128-0.283872 1.43e-85 0.412 0.384364-0.439636 9.83e-187 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002895/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.5290537927129 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-raw-plink-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-raw-plink-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Diastolic-blood-Pressure_4079-raw_PLINK_MGI-Freeze3_20211120 4079-raw Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 24976 1.8e-111 0.0209545483932565 Beta 0.313 0.224408-0.401592 0.313 0.224408-0.401592 0.308 0.244888-0.371112 0.308 0.244888-0.371112 0.3 0.259232-0.340768 0.3 0.259232-0.340768 0.288 0.258208-0.317792 0.288 0.258208-0.317792 0.254 0.233028-0.274972 0.254 0.233028-0.274972 0.155 0.130108-0.179892 3.87e-34 0.247 0.221128-0.272872 2.57e-78 0.393 0.364972-0.421028 1.42e-165 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 3.98e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002896/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.6446311011553 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-raw-dbslmm-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Diastolic-blood-Pressure_4079-raw_DBSLMM_MGI-Freeze3_20211120 4079-raw Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7259551 1.4e-110 0.0238262938756336 Beta 0.327 0.2388-0.4152 0.327 0.2388-0.4152 0.281 0.218084-0.343916 0.281 0.218084-0.343916 0.294 0.253428-0.334572 0.294 0.253428-0.334572 0.292 0.262404-0.321596 0.292 0.262404-0.321596 0.255 0.23442-0.27558 0.255 0.23442-0.27558 0.154 0.129304-0.178696 1.66e-34 0.255 0.229912-0.280088 6.35e-88 0.396 0.369344-0.422656 1.75e-187 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002897/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.6524769332205 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-raw-prscs-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Diastolic-blood-Pressure_4079-raw_PRSCS_MGI-Freeze3_20211120 4079-raw Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 4.8e-170 0.0293362963670312 Beta 0.422 0.3338-0.5102 0.422 0.3338-0.5102 0.353 0.290084-0.415916 0.353 0.290084-0.415916 0.341 0.300428-0.381572 0.341 0.300428-0.381572 0.323 0.293404-0.352596 0.323 0.293404-0.352596 0.298 0.277224-0.318776 0.298 0.277224-0.318776 0.195 0.1705-0.2195 1.3e-54 0.328 0.302324-0.353676 6.57e-139 0.482 0.454756-0.509244 1.67e-262 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002898/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.1287716825179 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-4079-raw-lassosum-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-4079-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_4079-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Diastolic-blood-Pressure_4079-raw_LASSOSUM_MGI-Freeze3_20211120 4079-raw Diastolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 749859 2.6e-152 0.0271776547170637 Beta 0.426 0.3378-0.5142 0.426 0.3378-0.5142 0.374 0.31128-0.43672 0.374 0.31128-0.43672 0.327 0.286624-0.367376 0.327 0.286624-0.367376 0.312 0.2826-0.3414 0.312 0.2826-0.3414 0.28 0.25942-0.30058 0.28 0.25942-0.30058 0.17 0.1455-0.1945 4.95e-42 0.289 0.263716-0.314284 5.11e-111 0.437 0.410736-0.463264 6.28e-232 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002894/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_4079-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.2838193338384 normal_range 0.01 80 exprsweb-systolic-blood-pressure-4080-irnt-pt-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Systolic-blood-pressure_4080-irnt_PT_MGI-Freeze3_20211120 4080-irnt Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 24765 3.3e-155 0.0217066564320574 Beta 0.438 0.35274-0.52326 0.438 0.35274-0.52326 0.394 0.33324-0.45476 0.394 0.33324-0.45476 0.308 0.268996-0.347004 0.308 0.268996-0.347004 0.278 0.24958-0.30642 0.278 0.24958-0.30642 0.242 0.222204-0.261796 0.242 0.222204-0.261796 0.16 0.136088-0.183912 1.9e-39 0.286 0.261892-0.310108 1.79e-119 0.394 0.368912-0.419088 1.86e-207 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003070/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 139.426181661887 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-irnt-plink-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Systolic-blood-pressure_4080-irnt_PLINK_MGI-Freeze3_20211120 4080-irnt Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 41867 8.6e-111 0.0194581613054535 Beta 0.28 0.19474-0.36526 0.28 0.19474-0.36526 0.312 0.251436-0.372564 0.312 0.251436-0.372564 0.271 0.231996-0.310004 0.271 0.231996-0.310004 0.241 0.21258-0.26942 0.241 0.21258-0.26942 0.227 0.207204-0.246796 0.227 0.207204-0.246796 0.146 0.122088-0.169912 2.37e-33 0.238 0.213696-0.262304 1.57e-82 0.358 0.332912-0.383088 1.01e-172 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 2.51e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003071/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 140.634800647681 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Systolic-blood-pressure_4080-irnt_DBSLMM_MGI-Freeze3_20211120 4080-irnt Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7477086 4e-143 0.0232762417140292 Beta 0.29 0.20474-0.37526 0.29 0.20474-0.37526 0.36 0.299436-0.420564 0.36 0.299436-0.420564 0.297 0.257996-0.336004 0.297 0.257996-0.336004 0.267 0.238776-0.295224 0.267 0.238776-0.295224 0.245 0.2254-0.2646 0.245 0.2254-0.2646 0.156 0.132284-0.179716 7.34e-38 0.261 0.236892-0.285108 1.75e-100 0.383 0.3585-0.4075 7.77e-207 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003072/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 139.753049365244 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-irnt-prscs-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Systolic-blood-pressure_4080-irnt_PRSCS_MGI-Freeze3_20211120 4080-irnt Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 1.7e-189 0.0305622833451973 Beta 0.41 0.32474-0.49526 0.41 0.32474-0.49526 0.378 0.317436-0.438564 0.378 0.317436-0.438564 0.333 0.293996-0.372004 0.333 0.293996-0.372004 0.309 0.28058-0.33742 0.309 0.28058-0.33742 0.283 0.2634-0.3026 0.283 0.2634-0.3026 0.197 0.17348-0.22052 1.85e-60 0.303 0.278892-0.327108 7.83e-135 0.453 0.428304-0.477696 4.53e-284 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003073/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 138.507366389751 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-irnt-lassosum-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Systolic-blood-pressure_4080-irnt_LASSOSUM_MGI-Freeze3_20211120 4080-irnt Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 775138 1.6e-177 0.028246850125765 Beta 0.406 0.320936-0.491064 0.406 0.320936-0.491064 0.365 0.304436-0.425564 0.365 0.304436-0.425564 0.325 0.286192-0.363808 0.325 0.286192-0.363808 0.301 0.272776-0.329224 0.301 0.272776-0.329224 0.284 0.2644-0.3036 0.284 0.2644-0.3036 0.192 0.168284-0.215716 2.48e-57 0.278 0.254284-0.301716 4.56e-116 0.444 0.4195-0.4685 1.76e-277 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003069/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 138.826470644036 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-raw-pt-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-raw-pt-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Systolic-blood-pressure_4080-raw_PT_MGI-Freeze3_20211120 4080-raw Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 16283 5.4e-150 0.0197996949111815 Beta 0.422 0.33674-0.50726 0.422 0.33674-0.50726 0.357 0.29624-0.41776 0.357 0.29624-0.41776 0.311 0.2718-0.3502 0.311 0.2718-0.3502 0.276 0.24758-0.30442 0.276 0.24758-0.30442 0.237 0.217204-0.256796 0.237 0.217204-0.256796 0.157 0.133284-0.180716 4.33e-38 0.272 0.247696-0.296304 1.35e-106 0.381 0.355912-0.406088 7.39e-193 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 5.01e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003075/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 139.567109022324 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-raw-plink-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-raw-plink-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Systolic-blood-pressure_4080-raw_PLINK_MGI-Freeze3_20211120 4080-raw Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 25673 1.5e-109 0.0191071085350085 Beta 0.337 0.25174-0.42226 0.337 0.25174-0.42226 0.344 0.283436-0.404564 0.344 0.283436-0.404564 0.27 0.230996-0.309004 0.27 0.230996-0.309004 0.24 0.21158-0.26842 0.24 0.21158-0.26842 0.234 0.214204-0.253796 0.234 0.214204-0.253796 0.139 0.115284-0.162716 2.27e-30 0.235 0.210892-0.259108 2.84e-81 0.362 0.337108-0.386892 2.2e-179 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 2.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003076/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 140.668646040424 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-raw-dbslmm-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Systolic-blood-pressure_4080-raw_DBSLMM_MGI-Freeze3_20211120 4080-raw Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7477072 8.1e-137 0.0229906841958679 Beta 0.373 0.28774-0.45826 0.373 0.28774-0.45826 0.315 0.254436-0.375564 0.315 0.254436-0.375564 0.296 0.256996-0.335004 0.296 0.256996-0.335004 0.272 0.243776-0.300224 0.272 0.243776-0.300224 0.252 0.2324-0.2716 0.252 0.2324-0.2716 0.167 0.143284-0.190716 1.27e-43 0.248 0.224088-0.271912 3.47e-91 0.393 0.3685-0.4175 1.04e-216 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003077/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 139.924163891306 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-raw-prscs-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Systolic-blood-pressure_4080-raw_PRSCS_MGI-Freeze3_20211120 4080-raw Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113831 2.1e-186 0.029382009670227 Beta 0.437 0.35174-0.52226 0.437 0.35174-0.52226 0.348 0.287436-0.408564 0.348 0.287436-0.408564 0.339 0.299996-0.378004 0.339 0.299996-0.378004 0.32 0.29158-0.34842 0.32 0.29158-0.34842 0.278 0.2584-0.2976 0.278 0.2584-0.2976 0.189 0.16548-0.21252 3.54e-55 0.308 0.283892-0.332108 2.33e-139 0.446 0.4215-0.4705 6.82e-279 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003078/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 138.589533914395 normal_range 0.01 120 exprsweb-systolic-blood-pressure-4080-raw-lassosum-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-4080-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_4080-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Systolic-blood-pressure_4080-raw_LASSOSUM_MGI-Freeze3_20211120 4080-raw Systolic blood pressure, automated reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 730914 1.4e-172 0.0265086761052551 Beta 0.437 0.351936-0.522064 0.437 0.351936-0.522064 0.368 0.307436-0.428564 0.368 0.307436-0.428564 0.321 0.282192-0.359808 0.321 0.282192-0.359808 0.29 0.261776-0.318224 0.29 0.261776-0.318224 0.276 0.2564-0.2956 0.276 0.2564-0.2956 0.18 0.156284-0.203716 3.26e-50 0.276 0.252088-0.299912 1.32e-113 0.429 0.404696-0.453304 9.87999999999999e-261 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 s=0.9;Lambda=0.00264 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003074/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_4080-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 138.958772330777 normal_range 0.01 120 exprsweb-height-50-irnt-pt-mgi-freeze3-20211120 exprsweb-height-50-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Height_50-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Height_50-irnt_PT_MGI-Freeze3_20211120 50-irnt Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 34284 1.8e-1720 0.125800904103144 Beta 0.893 0.832044-0.953956 0.893 0.832044-0.953956 0.828 0.78488-0.87112 0.828 0.78488-0.87112 0.736 0.70856-0.76344 0.736 0.70856-0.76344 0.669 0.6494-0.6886 0.669 0.6494-0.6886 0.592 0.5787308-0.6052692 0.592 0.5787308-0.6052692 0.33 0.3148884-0.3451116 1e-400 0.543 0.5275552-0.5584448 1e-1030 0.89 0.8736928-0.9063072 1e-2490 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 5.01e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002965/ScoringFiles/ phewas/ExPRSweb_Height_50-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 34.5980339073364 normal_range cm stratify by Sex exprsweb-height-50-irnt-plink-mgi-freeze3-20211120 exprsweb-height-50-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Height_50-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Height_50-irnt_PLINK_MGI-Freeze3_20211120 50-irnt Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 49307 3.5e-1692 0.122910011201028 Beta 0.878 0.817044-0.938956 0.878 0.817044-0.938956 0.846 0.80288-0.88912 0.846 0.80288-0.88912 0.759 0.731756-0.786244 0.759 0.731756-0.786244 0.671 0.6514-0.6906 0.671 0.6514-0.6906 0.582 0.5686916-0.5953084 0.582 0.5686916-0.5953084 0.318 0.3028688-0.3331312 1e-371 0.538 0.5224572-0.5535428 1e-1000 0.874 0.8575752-0.8904248 1e-2370 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 1.58e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002966/ScoringFiles/ phewas/ExPRSweb_Height_50-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 34.7428747852489 normal_range cm stratify by Sex exprsweb-height-50-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-height-50-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Height_50-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Height_50-irnt_DBSLMM_MGI-Freeze3_20211120 50-irnt Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10297259 1.7e-692 0.0632965676691148 Beta 0.657 0.595848-0.718152 0.657 0.595848-0.718152 0.572 0.528684-0.615316 0.572 0.528684-0.615316 0.504 0.476364-0.531636 0.504 0.476364-0.531636 0.45 0.430008-0.469992 0.45 0.430008-0.469992 0.391 0.3772212-0.4047788 0.391 0.3772212-0.4047788 0.222 0.2058104-0.2381896 1.31e-159 0.379 0.3624772-0.3955228 1e-440 0.595 0.5780264-0.6119736 1e-1030 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002967/ScoringFiles/ phewas/ExPRSweb_Height_50-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 40.7741558471172 normal_range cm stratify by Sex exprsweb-height-50-irnt-prscs-mgi-freeze3-20211120 exprsweb-height-50-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Height_50-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Height_50-irnt_PRSCS_MGI-Freeze3_20211120 50-irnt Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 1.1e-1979 0.137388525104123 Beta 0.941 0.880044-1.001956 0.941 0.880044-1.001956 0.869 0.826076-0.911924 0.869 0.826076-0.911924 0.788 0.760756-0.815244 0.788 0.760756-0.815244 0.709 0.6895176-0.7284824 0.709 0.6895176-0.7284824 0.613 0.5998484-0.6261516 0.613 0.5998484-0.6261516 0.338 0.3231432-0.3528568 1e-434 0.572 0.5569668-0.5870332 1e-1210 0.92 0.9041828-0.9358172 1e-2830 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002968/ScoringFiles/ phewas/ExPRSweb_Height_50-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 33.3251212885928 normal_range cm stratify by Sex exprsweb-height-50-irnt-lassosum-mgi-freeze3-20211120 exprsweb-height-50-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Height_50-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Height_50-irnt_LASSOSUM_MGI-Freeze3_20211120 50-irnt Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1291379 9.4e-1888 0.129567702069619 Beta 0.929 0.868044-0.989956 0.929 0.868044-0.989956 0.862 0.81888-0.90512 0.862 0.81888-0.90512 0.759 0.73156-0.78644 0.759 0.73156-0.78644 0.696 0.6764196-0.7155804 0.696 0.6764196-0.7155804 0.603 0.5897504-0.6162496 0.603 0.5897504-0.6162496 0.335 0.3199864-0.3500136 1e-418 0.563 0.5478688-0.5781312 1e-1160 0.909 0.8928692-0.9251308 1e-2650 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 s=0.5;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002964/ScoringFiles/ phewas/ExPRSweb_Height_50-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 33.7656853038029 normal_range cm stratify by Sex exprsweb-height-50-raw-pt-mgi-freeze3-20211120 exprsweb-height-50-raw-pt-mgi-freeze3-20211120 ExPRSweb_Height_50-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Height_50-raw_PT_MGI-Freeze3_20211120 50-raw Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 31805 8.6e-1725 0.12621369025838 Beta 0.885 0.824044-0.945956 0.885 0.824044-0.945956 0.86 0.81688-0.90312 0.86 0.81688-0.90312 0.739 0.711756-0.766244 0.739 0.711756-0.766244 0.665 0.6454-0.6846 0.665 0.6454-0.6846 0.592 0.5787504-0.6052496 0.592 0.5787504-0.6052496 0.328 0.3128688-0.3431312 1e-393 0.544 0.5286336-0.5593664 1e-1050 0.889 0.8727712-0.9052288 1e-2510 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 3.98e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002970/ScoringFiles/ phewas/ExPRSweb_Height_50-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 34.5760356691927 normal_range cm exprsweb-height-50-raw-plink-mgi-freeze3-20211120 exprsweb-height-50-raw-plink-mgi-freeze3-20211120 ExPRSweb_Height_50-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Height_50-raw_PLINK_MGI-Freeze3_20211120 50-raw Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 44500 2.5e-1708 0.122528756604439 Beta 0.883 0.822044-0.943956 0.883 0.822044-0.943956 0.853 0.80988-0.89612 0.853 0.80988-0.89612 0.755 0.727756-0.782244 0.755 0.727756-0.782244 0.675 0.6554196-0.6945804 0.675 0.6554196-0.6945804 0.581 0.5677112-0.5942888 0.581 0.5677112-0.5942888 0.327 0.3118688-0.3421312 1e-391 0.545 0.5295552-0.5604448 1e-1040 0.878 0.8616144-0.8943856 1e-2400 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002971/ScoringFiles/ phewas/ExPRSweb_Height_50-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 34.6600395791475 normal_range cm exprsweb-height-50-raw-dbslmm-mgi-freeze3-20211120 exprsweb-height-50-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Height_50-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Height_50-raw_DBSLMM_MGI-Freeze3_20211120 50-raw Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10297262 6.3e-704 0.0627052841877938 Beta 0.648 0.586848-0.709152 0.648 0.586848-0.709152 0.594 0.550684-0.637316 0.594 0.550684-0.637316 0.528 0.500364-0.555636 0.528 0.500364-0.555636 0.46 0.440008-0.479992 0.46 0.440008-0.479992 0.394 0.3802408-0.4077592 0.394 0.3802408-0.4077592 0.226 0.2097712-0.2422288 5.29e-164 0.379 0.3625556-0.3954444 1e-446 0.6 0.5830656-0.6169344 1e-1050 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002972/ScoringFiles/ phewas/ExPRSweb_Height_50-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 40.6934170264706 normal_range cm exprsweb-height-50-raw-prscs-mgi-freeze3-20211120 exprsweb-height-50-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Height_50-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Height_50-raw_PRSCS_MGI-Freeze3_20211120 50-raw Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113832 2.2e-1988 0.137581483945675 Beta 0.933 0.872044-0.993956 0.933 0.872044-0.993956 0.878 0.835076-0.920924 0.878 0.835076-0.920924 0.781 0.753756-0.808244 0.781 0.753756-0.808244 0.713 0.6935176-0.7324824 0.713 0.6935176-0.7324824 0.614 0.600868-0.627132 0.614 0.600868-0.627132 0.338 0.3231236-0.3528764 1e-433 0.57 0.5549472-0.5850528 1e-1200 0.92 0.9042024-0.9357976 1e-2830 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002973/ScoringFiles/ phewas/ExPRSweb_Height_50-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 33.2839628302516 normal_range cm exprsweb-height-50-raw-lassosum-mgi-freeze3-20211120 exprsweb-height-50-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Height_50-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Height_50-raw_LASSOSUM_MGI-Freeze3_20211120 50-raw Standing height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1296068 3.2e-1898 0.129679422473324 Beta 0.929 0.868044-0.989956 0.929 0.868044-0.989956 0.855 0.81188-0.89812 0.855 0.81188-0.89812 0.757 0.72956-0.78444 0.757 0.72956-0.78444 0.694 0.6744196-0.7135804 0.694 0.6744196-0.7135804 0.607 0.59377-0.62023 0.607 0.59377-0.62023 0.334 0.3189864-0.3490136 1e-415 0.562 0.5468492-0.5771508 1e-1150 0.911 0.8949084-0.9270916 1e-2680 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 s=0.5;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002969/ScoringFiles/ phewas/ExPRSweb_Height_50-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_50-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 33.714908324113 normal_range cm exprsweb-systolic-blood-pressure-93-irnt-pt-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Systolic-blood-pressure_93-irnt_PT_MGI-Freeze3_20211120 93-irnt Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 11085 1.1e-14 0.00218464264691974 Beta 0.105 0.019936-0.190064 0.105 0.019936-0.190064 0.0681 0.007536-0.128664 0.0681 0.007536-0.128664 0.0833 0.044296-0.122304 0.0833 0.044296-0.122304 0.0871 0.058876-0.115324 0.0871 0.058876-0.115324 0.0758 0.0562-0.0954 0.0758 0.0562-0.0954 0.0366 0.012688-0.060512 0.00265 0.0799 0.055988-0.103812 5.33e-11 0.116 0.091892-0.140108 3.67e-21 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003080/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.314247295278 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-irnt-plink-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Systolic-blood-pressure_93-irnt_PLINK_MGI-Freeze3_20211120 93-irnt Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 22519 3.1e-10 0.00210544591279141 Beta 0.076 -0.00926-0.16126 0.076 -0.00926-0.16126 0.0317 -0.028864-0.092264 0.0317 -0.028864-0.092264 0.0728 0.033796-0.111804 0.0728 0.033796-0.111804 0.0802 0.05178-0.10862 0.0802 0.05178-0.10862 0.0591 0.039304-0.078896 0.0591 0.039304-0.078896 0.0439 0.019988-0.067812 3e-04 0.0662 0.042092-0.090308 7.85e-08 0.0947 0.0702-0.1192 3.73e-14 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 5.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003081/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.438925104391 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Systolic-blood-pressure_93-irnt_DBSLMM_MGI-Freeze3_20211120 93-irnt Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6341932 1.2e-06 0.000633144644266625 Beta 0.0277 -0.057364-0.112764 0.0277 -0.057364-0.112764 0.0723 0.011736-0.132864 0.0723 0.011736-0.132864 0.0332 -0.005608-0.072008 0.0332 -0.005608-0.072008 0.0559 0.027676-0.084124 0.0559 0.027676-0.084124 0.0476 0.0280196-0.0671804 0.0476 0.0280196-0.0671804 0.0309 0.006792-0.055008 0.0118 0.0598 0.035888-0.083712 1.01e-06 0.0789 0.054792-0.103008 1.32e-10 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003082/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.538732144757 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-irnt-prscs-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Systolic-blood-pressure_93-irnt_PRSCS_MGI-Freeze3_20211120 93-irnt Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113774 1.2e-26 0.00421774106480507 Beta 0.162 0.07674-0.24726 0.162 0.07674-0.24726 0.148 0.087436-0.208564 0.148 0.087436-0.208564 0.116 0.076996-0.155004 0.116 0.076996-0.155004 0.1 0.071776-0.128224 0.1 0.071776-0.128224 0.099 0.0794-0.1186 0.099 0.0794-0.1186 0.0811 0.057188-0.105012 2.96e-11 0.12 0.095892-0.144108 2.02e-22 0.165 0.140892-0.189108 1.06e-40 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003083/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 142.977942165341 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-irnt-lassosum-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Systolic-blood-pressure_93-irnt_LASSOSUM_MGI-Freeze3_20211120 93-irnt Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 354112 3.2e-15 0.00312946481043805 Beta 0.0965 0.011436-0.181564 0.0965 0.011436-0.181564 0.0847 0.024136-0.145264 0.0847 0.024136-0.145264 0.0825 0.043496-0.121504 0.0825 0.043496-0.121504 0.0889 0.060676-0.117124 0.0889 0.060676-0.117124 0.0875 0.0679-0.1071 0.0875 0.0679-0.1071 0.0411 0.017188-0.065012 0.000758 0.0813 0.057192-0.105408 3.37e-11 0.13 0.105892-0.154108 4.93e-26 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 s=0.5;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003079/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.298999629473 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-raw-pt-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-raw-pt-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Systolic-blood-pressure_93-raw_PT_MGI-Freeze3_20211120 93-raw Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 13447 1.5e-12 0.00238366715646517 Beta 0.0835 -0.001564-0.168564 0.0835 -0.001564-0.168564 0.105 0.044436-0.165564 0.105 0.044436-0.165564 0.0879 0.048896-0.126904 0.0879 0.048896-0.126904 0.072 0.043776-0.100224 0.072 0.043776-0.100224 0.0798 0.0602-0.0994 0.0798 0.0602-0.0994 0.0342 0.010288-0.058112 0.00488 0.0672 0.043288-0.091112 3.95e-08 0.114 0.089892-0.138108 1.67e-20 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003085/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.374014822839 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-raw-plink-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-raw-plink-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Systolic-blood-pressure_93-raw_PLINK_MGI-Freeze3_20211120 93-raw Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 27471 6.4e-09 0.00187785989620562 Beta 0.0517 -0.03356-0.13696 0.0517 -0.03356-0.13696 0.0319 -0.028664-0.092464 0.0319 -0.028664-0.092464 0.048 0.008996-0.087004 0.048 0.008996-0.087004 0.0678 0.03938-0.09622 0.0678 0.03938-0.09622 0.0528 0.0332-0.0724 0.0528 0.0332-0.0724 0.0433 0.019388-0.067212 0.000379 0.0782 0.054288-0.102112 1.65e-10 0.0934 0.069096-0.117704 6.14e-14 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 3.98e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003086/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.475635832188 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-raw-dbslmm-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Systolic-blood-pressure_93-raw_DBSLMM_MGI-Freeze3_20211120 93-raw Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6762103 2.8e-05 0.000198836967483299 Beta 0.0346 -0.050464-0.119664 0.0346 -0.050464-0.119664 0.0201 -0.040464-0.080664 0.0201 -0.040464-0.080664 0.0418 0.002992-0.080608 0.0418 0.002992-0.080608 0.0432 0.014976-0.071424 0.0432 0.014976-0.071424 0.0328 0.0132-0.0524 0.0328 0.0132-0.0524 0.0339 0.009988-0.057812 0.00553 0.0585 0.034392-0.082608 1.86e-06 0.0629 0.038792-0.087008 3.02e-07 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003087/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.575867328587 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-raw-prscs-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Systolic-blood-pressure_93-raw_PRSCS_MGI-Freeze3_20211120 93-raw Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113774 1.1e-23 0.00404147552465791 Beta 0.157 0.07174-0.24226 0.157 0.07174-0.24226 0.162 0.101436-0.222564 0.162 0.101436-0.222564 0.114 0.074996-0.153004 0.114 0.074996-0.153004 0.104 0.075776-0.132224 0.104 0.075776-0.132224 0.0943 0.0747-0.1139 0.0943 0.0747-0.1139 0.0718 0.047888-0.095712 4.06e-09 0.11 0.085892-0.134108 6.3e-19 0.154 0.129696-0.178304 1.07e-35 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003088/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.061196279307 normal_range 0.01 120 exprsweb-systolic-blood-pressure-93-raw-lassosum-mgi-freeze3-20211120 exprsweb-systolic-blood-pressure-93-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Systolic-blood-pressure_93-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Systolic-blood-pressure_93-raw_LASSOSUM_MGI-Freeze3_20211120 93-raw Systolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 353555 3.6e-16 0.00308991692668474 Beta 0.106 0.020936-0.191064 0.106 0.020936-0.191064 0.0758 0.015236-0.136364 0.0758 0.015236-0.136364 0.0887 0.049696-0.127704 0.0887 0.049696-0.127704 0.0967 0.068476-0.124924 0.0967 0.068476-0.124924 0.0856 0.066-0.1052 0.0856 0.066-0.1052 0.0567 0.032788-0.080612 3.32e-06 0.0837 0.059592-0.107808 1.07e-11 0.135 0.110892-0.159108 2.4e-28 TRUE FALSE FALSE TRUE Both 23072 0 GRCh37/hg19 s=0.9;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003084/ScoringFiles/ phewas/ExPRSweb_Systolic-blood-pressure_93-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Systolic-blood-pressure_93-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 143.272387859638 normal_range 0.01 120 exprsweb-diastolic-blood-pressure-94-irnt-pt-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-irnt-pt-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-irnt_PT_MGI-Freeze3_20211120 PT ExPRSweb_Diastolic-blood-Pressure_94-irnt_PT_MGI-Freeze3_20211120 94-irnt Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 13289 1.6e-08 0.00224814741471574 Beta 0.0184 -0.0698-0.1066 0.0184 -0.0698-0.1066 0.0803 0.01758-0.14302 0.0803 0.01758-0.14302 0.109 0.06882-0.14918 0.109 0.06882-0.14918 0.0927 0.063496-0.121904 0.0927 0.063496-0.121904 0.0678 0.047416-0.088184 0.0678 0.047416-0.088184 0.0436 0.018708-0.068492 0.000594 0.0679 0.043204-0.092596 7.73e-08 0.105 0.080108-0.129892 1.48e-16 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002900/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.5763047168273 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-irnt-plink-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-irnt-plink-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-irnt_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Diastolic-blood-Pressure_94-irnt_PLINK_MGI-Freeze3_20211120 94-irnt Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 27506 3.8e-09 0.00206894799655256 Beta 0.13 0.0418-0.2182 0.13 0.0418-0.2182 0.0891 0.02638-0.15182 0.0891 0.02638-0.15182 0.0972 0.056824-0.137576 0.0972 0.056824-0.137576 0.0768 0.0474-0.1062 0.0768 0.0474-0.1062 0.0632 0.042816-0.083584 0.0632 0.042816-0.083584 0.0385 0.013608-0.063392 0.00239 0.0542 0.029308-0.079092 1.93e-05 0.093 0.067716-0.118284 4.68e-13 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 3.16e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002901/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.5706457341066 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-irnt-dbslmm-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-irnt-dbslmm-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-irnt_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Diastolic-blood-Pressure_94-irnt_DBSLMM_MGI-Freeze3_20211120 94-irnt Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7218263 1.3e-06 0.000442063087900184 Beta 0.00584 -0.082164-0.093844 0.00584 -0.082164-0.093844 0.0272 -0.03552-0.08992 0.0272 -0.03552-0.08992 0.0482 0.00802-0.08838 0.0482 0.00802-0.08838 0.0597 0.030496-0.088904 0.0597 0.030496-0.088904 0.0505 0.030116-0.070884 0.0505 0.030116-0.070884 0.0249 0.000008-0.049792 0.0497 0.0425 0.017608-0.067392 0.00084 0.0712 0.046112-0.096288 2.55e-08 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002902/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.5933718856557 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-irnt-prscs-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-irnt-prscs-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-irnt_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Diastolic-blood-Pressure_94-irnt_PRSCS_MGI-Freeze3_20211120 94-irnt Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113774 8e-24 0.00329846978650705 Beta 0.0758 -0.0124-0.164 0.0758 -0.0124-0.164 0.0866 0.02388-0.14932 0.0866 0.02388-0.14932 0.117 0.076624-0.157376 0.117 0.076624-0.157376 0.107 0.0776-0.1364 0.107 0.0776-0.1364 0.0924 0.072016-0.112784 0.0924 0.072016-0.112784 0.058 0.033108-0.082892 4.7e-06 0.123 0.098108-0.147892 4.83e-22 0.156 0.130716-0.181284 1.3e-33 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002903/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.4368342571028 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-irnt-lassosum-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-irnt-lassosum-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-irnt_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Diastolic-blood-Pressure_94-irnt_LASSOSUM_MGI-Freeze3_20211120 94-irnt Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 353663 8e-13 0.00318130235947594 Beta 0.157 0.0688-0.2452 0.157 0.0688-0.2452 0.136 0.07328-0.19872 0.136 0.07328-0.19872 0.107 0.066624-0.147376 0.107 0.066624-0.147376 0.0928 0.0634-0.1222 0.0928 0.0634-0.1222 0.0757 0.055316-0.096084 0.0757 0.055316-0.096084 0.0612 0.036504-0.085896 1.3e-06 0.0978 0.072712-0.122888 2.13e-14 0.13 0.104912-0.155088 4.66e-24 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 s=0.9;Lambda=0.00695 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002899/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-irnt_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.5372431034484 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-raw-pt-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-raw-pt-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-raw_PT_MGI-Freeze3_20211120 PT ExPRSweb_Diastolic-blood-Pressure_94-raw_PT_MGI-Freeze3_20211120 94-raw Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 10968 8.9e-09 0.00233941300750281 Beta 0.0875 -0.0007-0.1757 0.0875 -0.0007-0.1757 0.0779 0.01518-0.14062 0.0779 0.01518-0.14062 0.12 0.07982-0.16018 0.12 0.07982-0.16018 0.0894 0.060196-0.118604 0.0894 0.060196-0.118604 0.0605 0.040116-0.080884 0.0605 0.040116-0.080884 0.0506 0.025708-0.075492 6.73e-05 0.0663 0.041604-0.090996 1.42e-07 0.0997 0.074808-0.124592 4.85e-15 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002905/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.573957554005 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-raw-plink-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-raw-plink-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-raw_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Diastolic-blood-Pressure_94-raw_PLINK_MGI-Freeze3_20211120 94-raw Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 22461 1.5e-09 0.00231019130770747 Beta 0.157 0.0688-0.2452 0.157 0.0688-0.2452 0.12 0.05728-0.18272 0.12 0.05728-0.18272 0.0838 0.043424-0.124176 0.0838 0.043424-0.124176 0.0807 0.0513-0.1101 0.0807 0.0513-0.1101 0.0694 0.049016-0.089784 0.0694 0.049016-0.089784 0.0497 0.024808-0.074592 8.8e-05 0.0495 0.024608-0.074392 9.79e-05 0.103 0.077716-0.128284 1.05e-15 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 3.16e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002906/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.5669846218035 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-raw-dbslmm-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-raw-dbslmm-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-raw_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Diastolic-blood-Pressure_94-raw_DBSLMM_MGI-Freeze3_20211120 94-raw Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 6683891 0.0019 0.00019327164100997 Beta -0.0483 -0.136304-0.039704 -0.0483 -0.136304-0.039704 -0.0232 -0.08592-0.03952 -0.0232 -0.08592-0.03952 0.00614 -0.03404-0.04632 0.00614 -0.03404-0.04632 0.018 -0.011204-0.047204 0.018 -0.011204-0.047204 0.0354 0.015016-0.055784 0.0354 0.015016-0.055784 0.0221 -0.002792-0.046992 0.0804 0.0309 0.006008-0.055792 0.0148 0.0535 0.028412-0.078588 2.93e-05 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002907/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.6213024488167 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-raw-prscs-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-raw-prscs-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-raw_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Diastolic-blood-Pressure_94-raw_PRSCS_MGI-Freeze3_20211120 94-raw Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1113774 3e-22 0.0035768729561947 Beta 0.106 0.0178-0.1942 0.106 0.0178-0.1942 0.112 0.04928-0.17472 0.112 0.04928-0.17472 0.138 0.097624-0.178376 0.138 0.097624-0.178376 0.114 0.0846-0.1434 0.114 0.0846-0.1434 0.0933 0.072916-0.113684 0.0933 0.072916-0.113684 0.0769 0.052008-0.101792 1.24e-09 0.119 0.094108-0.143892 7.93e-21 0.16 0.134716-0.185284 3.45e-35 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002908/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.4511609105359 normal_range 0.01 80 exprsweb-diastolic-blood-pressure-94-raw-lassosum-mgi-freeze3-20211120 exprsweb-diastolic-blood-pressure-94-raw-lassosum-mgi-freeze3-20211120 ExPRSweb_Diastolic-blood-Pressure_94-raw_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Diastolic-blood-Pressure_94-raw_LASSOSUM_MGI-Freeze3_20211120 94-raw Diastolic blood pressure, manual reading Quantitative CHR information is in SNP ID, Allele count and other variant annotation can be found MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 353446 2.6e-12 0.00305837911469928 Beta 0.159 0.0708-0.2472 0.159 0.0708-0.2472 0.138 0.07528-0.20072 0.138 0.07528-0.20072 0.11 0.069624-0.150376 0.11 0.069624-0.150376 0.0881 0.0587-0.1175 0.0881 0.0587-0.1175 0.0716 0.051216-0.091984 0.0716 0.051216-0.091984 0.0564 0.031704-0.081096 8.11e-06 0.0969 0.071812-0.121988 3.9e-14 0.124 0.098716-0.149284 5.73e-22 TRUE FALSE FALSE TRUE Both 23074 0 GRCh37/hg19 s=0.9;Lambda=0.00695 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002904/ScoringFiles/ phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Diastolic-blood-Pressure_94-raw_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.5419373783647 normal_range 0.01 80 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 108 1.1e-55 0.010850134365268 Beta 0.321 0.236916-0.405084 0.321 0.236916-0.405084 0.279 0.21922-0.33878 0.279 0.21922-0.33878 0.257 0.21878-0.29522 0.257 0.21878-0.29522 0.212 0.184168-0.239832 0.212 0.184168-0.239832 0.168 0.1487332-0.1872668 0.168 0.1487332-0.1872668 0.0767 0.053376-0.100024 1.03e-10 0.145 0.12148-0.16852 1.19e-33 0.241 0.217284-0.264716 8.16e-89 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 1.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003250/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0390162695004615 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 108 1.1e-55 0.010850134365268 Beta 0.321 0.236916-0.405084 0.321 0.236916-0.405084 0.279 0.21922-0.33878 0.279 0.21922-0.33878 0.257 0.21878-0.29522 0.257 0.21878-0.29522 0.212 0.184168-0.239832 0.212 0.184168-0.239832 0.168 0.1487332-0.1872668 0.168 0.1487332-0.1872668 0.0767 0.053376-0.100024 1.03e-10 0.145 0.12148-0.16852 1.19e-33 0.241 0.217284-0.264716 8.16e-89 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 1.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003251/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0390162695004615 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 59729 0.0047 0.000235552096451156 Beta -0.0379 -0.12218-0.04638 -0.0379 -0.12218-0.04638 -0.015 -0.074976-0.044976 -0.015 -0.074976-0.044976 -0.0135 -0.052112-0.025112 -0.0135 -0.052112-0.025112 9.51e-05 -0.0279329-0.0281231 9.51e-05 -0.0279329-0.0281231 0.0182 -0.0012824-0.0376824 0.0182 -0.0012824-0.0376824 0.025 0.001088-0.048912 0.0411 0.039 0.015676-0.062324 0.00107 0.043 0.018892-0.067108 0.000461 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003252/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394737344173331 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 1109085 4e-107 0.0153833396640165 Beta 0.289 0.204132-0.373868 0.289 0.204132-0.373868 0.317 0.256436-0.377564 0.317 0.256436-0.377564 0.29 0.250996-0.329004 0.29 0.250996-0.329004 0.258 0.229384-0.286616 0.258 0.229384-0.286616 0.224 0.204204-0.243796 0.224 0.204204-0.243796 0.104 0.08048-0.12752 3.49e-18 0.205 0.180892-0.229108 4.16e-62 0.329 0.303716-0.354284 8.26e-143 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003253/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0385745416938028 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 202159 9.6e-97 0.0136564150589067 Beta 0.32 0.23572-0.40428 0.32 0.23572-0.40428 0.311 0.251024-0.370976 0.311 0.251024-0.370976 0.296 0.257584-0.334416 0.296 0.257584-0.334416 0.257 0.228972-0.285028 0.257 0.228972-0.285028 0.218 0.1985568-0.2374432 0.218 0.1985568-0.2374432 0.0932 0.06968-0.11672 6.2e-15 0.176 0.152284-0.199716 9.53e-48 0.306 0.281696-0.330304 6.27e-135 TRUE FALSE FALSE TRUE Both 20396 0 GRCh37/hg19 s=0.9;Lambda=0.01438 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003249/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0386628800743772 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-pt-ukb-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-pt-ukb-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_UKB_20211120 PT ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative UKB UK Biobank C+T (DS) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 176 5.1e-847 0.0132412123292993 Beta 0.318 0.290364-0.345636 0.318 0.290364-0.345636 0.291 0.2714-0.3106 0.291 0.2714-0.3106 0.257 0.2444168-0.2695832 0.257 0.2444168-0.2695832 0.231 0.2218664-0.2401336 0.231 0.2218664-0.2401336 0.203 0.1966888-0.2093112 0.203 0.1966888-0.2093112 0.11 0.1022776-0.1177224 1.2e-172 0.187 0.17916-0.19484 1e-478 0.302 0.2945128-0.3094872 1e-1360 TRUE FALSE FALSE TRUE Both 195036 0 GRCh37/hg19 1.00e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003265/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PT_UKB_20211120/exclusion.tsv 2021-01-10 227.792158682583 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-plink-ukb-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-plink-ukb-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative UKB UK Biobank C+T (GT) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 176 4.3e-845 0.0132348280467019 Beta 0.33 0.302364-0.357636 0.33 0.302364-0.357636 0.291 0.2714-0.3106 0.291 0.2714-0.3106 0.261 0.2484168-0.2735832 0.261 0.2484168-0.2735832 0.23 0.2208664-0.2391336 0.23 0.2208664-0.2391336 0.202 0.1956888-0.2083112 0.202 0.1956888-0.2083112 0.108 0.1003168-0.1156832 3.23e-167 0.19 0.1821208-0.1978792 1e-488 0.301 0.2936108-0.3083892 1e-1390 TRUE FALSE FALSE TRUE Both 195036 0 GRCh37/hg19 7.94e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003266/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 227.802313499367 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-dbslmm-ukb-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-dbslmm-ukb-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative UKB UK Biobank DBSLMM Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 22376 0.0016 5.23090633945896e-05 Beta -0.0352 -0.062836--0.007564 -0.0352 -0.062836--0.007564 -0.0324 -0.052--0.0128 -0.0324 -0.052--0.0128 -0.0199 -0.0325224--0.0072776 -0.0199 -0.0325224--0.0072776 -0.0163 -0.0254728--0.0071272 -0.0163 -0.0254728--0.0071272 -0.0141 -0.0204504--0.0077496 -0.0141 -0.0204504--0.0077496 -0.00412 -0.0118032-0.0035632 0.294 -0.00841 -0.0163284--0.0004916 0.0372 -0.0183 -0.025846--0.010754 2.12e-06 TRUE TRUE FALSE TRUE Both 195036 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003267/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 232.322256210282 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-prscs-ukb-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-prscs-ukb-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative UKB UK Biobank PRS-CS Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 1109812 1.7e-1454 0.0232320145145076 Beta 0.428 0.400364-0.455636 0.428 0.400364-0.455636 0.394 0.3744-0.4136 0.394 0.3744-0.4136 0.346 0.3334168-0.3585832 0.346 0.3334168-0.3585832 0.309 0.2998664-0.3181336 0.309 0.2998664-0.3181336 0.264 0.2576888-0.2703112 0.264 0.2576888-0.2703112 0.139 0.1315716-0.1464284 1.45e-293 0.239 0.2312972-0.2467028 1e-808 0.39 0.3821992-0.3978008 1e-2090 TRUE FALSE FALSE TRUE Both 195036 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003268/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 224.633494943195 normal_range exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-lassosum-ukb-20211120 exprsweb-egfr-creatine-ckdgen-1000genomes-discoverymeta-egfrcrea-lassosum-ukb-20211120 ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea eGFRcrea Quantitative UKB UK Biobank lassosum Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcrea_overall.csv.gz 214280 1.3e-1332 0.0217194367574637 Beta 0.435 0.407364-0.462636 0.435 0.407364-0.462636 0.386 0.3664-0.4056 0.386 0.3664-0.4056 0.33 0.3174168-0.3425832 0.33 0.3174168-0.3425832 0.294 0.2848664-0.3031336 0.294 0.2848664-0.3031336 0.254 0.2476888-0.2603112 0.254 0.2476888-0.2603112 0.134 0.1262972-0.1417028 1.07e-255 0.231 0.2234932-0.2385068 1e-791 0.376 0.3681796-0.3838204 1e-1930 TRUE FALSE FALSE TRUE Both 195036 0 GRCh37/hg19 s=0.9;Lambda=0.01129 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003264/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_CKDGen-1000Genomes-DiscoveryMeta-eGFRcrea_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 225.260261983226 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-pt-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 48 0.57 0.0495848365928026 Beta -0.218 -1.28228-0.84628 -0.218 -1.28228-0.84628 0.18 -0.653-1.013 0.18 -0.653-1.013 0.104 -0.4644-0.6724 0.104 -0.4644-0.6724 0.0742 -0.33936-0.48776 0.0742 -0.33936-0.48776 0.28 -0.00812-0.56812 0.28 -0.00812-0.56812 0.187 -0.20108-0.57508 0.345 0.0168 -0.31052-0.34412 0.92 0.314 -0.04664-0.67464 0.0883 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 1.00e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003290/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213905907582063 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-plink-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 49 0.51 0.0493973211955511 Beta -0.323 -1.3912-0.7452 -0.323 -1.3912-0.7452 0.18 -0.653-1.013 0.18 -0.653-1.013 0.104 -0.4644-0.6724 0.104 -0.4644-0.6724 0.0403 -0.37522-0.45582 0.0403 -0.37522-0.45582 0.283 -0.00512-0.57112 0.283 -0.00512-0.57112 0.216 -0.17992-0.61192 0.286 0.025 -0.3082-0.3582 0.883 0.283 -0.07176-0.63776 0.119 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 1.00e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003291/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213681337268813 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 88980 0.48 0.0184584472078854 Beta -0.463 -1.541-0.615 -0.463 -1.541-0.615 -0.202 -1.035-0.631 -0.202 -1.035-0.631 -0.0726 -0.64688-0.50168 -0.0726 -0.64688-0.50168 -0.0405 -0.46386-0.38286 -0.0405 -0.46386-0.38286 -0.179 -0.47496-0.11696 -0.179 -0.47496-0.11696 -0.31 -0.71964-0.09964 0.138 -0.0489 -0.48206-0.38426 0.824 -0.325 -0.7366-0.0866 0.121 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003292/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213541348706931 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-prscs-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 1114109 0.86 0.0274968854509438 Beta 0.64 -0.46544-1.74544 0.64 -0.46544-1.74544 1.27 0.42524-2.11476 1.27 0.42524-2.11476 0.627 0.05468-1.19932 0.627 0.05468-1.19932 0.178 -0.24536-0.60136 0.178 -0.24536-0.60136 0.266 -0.028-0.56 0.266 -0.028-0.56 0.104 -0.24684-0.45484 0.562 0.232 -0.14824-0.61224 0.231 0.383 -0.009-0.775 0.0562 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003293/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214546137851315 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-lassosum-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_MGI-Freeze3_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 162595 0.32 0.039682610573737 Beta 0.722 -0.35012-1.79412 0.722 -0.35012-1.79412 0.396 -0.437-1.229 0.396 -0.437-1.229 0.224 -0.34832-0.79632 0.224 -0.34832-0.79632 0.217 -0.19852-0.63252 0.217 -0.19852-0.63252 0.0936 -0.2004-0.3876 0.0936 -0.2004-0.3876 0.22 -0.2014-0.6414 0.306 -0.0802 -0.4526-0.2922 0.673 0.0212 -0.37276-0.41516 0.916 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 s=0.2;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003289/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.212431605893766 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-pt-ukb-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-pt-ukb-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_UKB_20211120 PT ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative UKB UK Biobank C+T (DS) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 15 3.3e-1661 0.0325551273727635 Beta 0.387 0.357796-0.416204 0.387 0.357796-0.416204 0.343 0.322028-0.363972 0.343 0.322028-0.363972 0.308 0.294574-0.321426 0.308 0.294574-0.321426 0.284 0.2743176-0.2936824 0.284 0.2743176-0.2936824 0.262 0.2552772-0.2687228 0.262 0.2552772-0.2687228 0.207 0.19916-0.21484 1e-583 0.34 0.3319248-0.3480752 1e-1480 0.444 0.4357288-0.4522712 1e-2400 TRUE FALSE FALSE TRUE Both 195103 0 GRCh37/hg19 2.00e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003305/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.0251129275082438 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-plink-ukb-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-plink-ukb-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative UKB UK Biobank C+T (GT) Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 15 1e-1659 0.0325425708455138 Beta 0.388 0.358796-0.417204 0.388 0.358796-0.417204 0.339 0.318224-0.359776 0.339 0.318224-0.359776 0.309 0.295574-0.322426 0.309 0.295574-0.322426 0.283 0.2732588-0.2927412 0.283 0.2732588-0.2927412 0.261 0.2542772-0.2677228 0.261 0.2542772-0.2677228 0.207 0.19916-0.21484 1e-585 0.34 0.3319052-0.3480948 1e-1470 0.443 0.4347288-0.4512712 1e-2400 TRUE FALSE FALSE TRUE Both 195103 0 GRCh37/hg19 2.00e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003306/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.025113776503183 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-dbslmm-ukb-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-dbslmm-ukb-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative UKB UK Biobank DBSLMM Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 11672 3e-06 4.39424275052457e-05 Beta -0.0212 -0.0506-0.0082 -0.0212 -0.0506-0.0082 -0.017 -0.037972-0.003972 -0.017 -0.037972-0.003972 -0.0164 -0.0298652--0.0029348 -0.0164 -0.0298652--0.0029348 -0.0195 -0.0292804--0.0097196 -0.0195 -0.0292804--0.0097196 -0.0146 -0.0213816--0.0078184 -0.0146 -0.0213816--0.0078184 -0.0122 -0.0204712--0.0039288 0.00392 -0.0121 -0.0203908--0.0038092 0.00434 -0.0227 -0.0309712--0.0144288 7.63e-08 TRUE TRUE FALSE TRUE Both 195103 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003307/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0260931105658794 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-prscs-ukb-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-prscs-ukb-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative UKB UK Biobank PRS-CS Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 1114999 3.8e-1268 0.0242697294578647 Beta 0.375 0.3456-0.4044 0.375 0.3456-0.4044 0.335 0.314028-0.355972 0.335 0.314028-0.355972 0.298 0.284574-0.311426 0.298 0.284574-0.311426 0.281 0.2712588-0.2907412 0.281 0.2712588-0.2907412 0.253 0.2462772-0.2597228 0.253 0.2462772-0.2597228 0.163 0.1551012-0.1708988 1e-358 0.271 0.262768-0.279232 1e-905 0.397 0.3887876-0.4052124 1e-1960 TRUE FALSE FALSE TRUE Both 195103 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003308/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0253391335630001 normal_range exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-lassosum-ukb-20211120 exprsweb-egfr-cystatinc-ckdgen-1000genomes-discoverymeta-egfrcys-lassosum-ukb-20211120 ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_UKB_20211120 CKDGen-1000Genomes-DiscoveryMeta-eGFRcys eGFRcys Quantitative UKB UK Biobank lassosum Large GWAS 28452372 http://ckdgen.imbi.uni-freiburg.de/files/Gorski2017/CKDGen_1000Genomes_DiscoveryMeta_eGFRcys_overall.csv.gz 174315 1.3e-1818 0.0358143687157919 Beta 0.363 0.3336-0.3924 0.363 0.3336-0.3924 0.338 0.317028-0.358972 0.338 0.317028-0.358972 0.316 0.302574-0.329426 0.316 0.302574-0.329426 0.294 0.2842588-0.3037412 0.294 0.2842588-0.3037412 0.277 0.2702772-0.2837228 0.277 0.2702772-0.2837228 0.217 0.2091796-0.2248204 1e-648 0.36 0.351964-0.368036 1e-1680 0.47 0.4618856-0.4781144 1e-2810 TRUE FALSE FALSE TRUE Both 195103 0 GRCh37/hg19 s=0.9;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003304/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_CKDGen-1000Genomes-DiscoveryMeta-eGFRcys_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0250234604744894 normal_range exprsweb-alcohol-amount-drinksperweek-pt-mgi-freeze3-20211120 exprsweb-alcohol-amount-drinksperweek-pt-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_MGI-Freeze3_20211120 PT ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_MGI-Freeze3_20211120 DrinksPerWeek DrinksPerWeek Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 12650 1.2e-17 0.00417454665598039 Beta 0.194 0.075224-0.312776 0.194 0.075224-0.312776 0.272 0.187524-0.356476 0.272 0.187524-0.356476 0.186 0.131708-0.240292 0.186 0.131708-0.240292 0.167 0.127604-0.206396 0.167 0.127604-0.206396 0.12 0.092756-0.147244 0.12 0.092756-0.147244 0.0786 0.04626-0.11094 1.96e-06 0.0945 0.06216-0.12684 9.55e-09 0.176 0.142484-0.209516 9.33e-25 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002831/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.73826581827523 normal_range exprsweb-alcohol-amount-drinksperweek-plink-mgi-freeze3-20211120 exprsweb-alcohol-amount-drinksperweek-plink-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_MGI-Freeze3_20211120 DrinksPerWeek DrinksPerWeek Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 27085 2.7e-08 0.00306561972932442 Beta 0.118 -0.000972-0.236972 0.118 -0.000972-0.236972 0.0724 -0.012076-0.156876 0.0724 -0.012076-0.156876 0.0731 0.018808-0.127392 0.0731 0.018808-0.127392 0.0803 0.040708-0.119892 0.0803 0.040708-0.119892 0.0919 0.06446-0.11934 0.0919 0.06446-0.11934 0.0832 0.050468-0.115932 6.7e-07 0.0807 0.047576-0.113824 1.89e-06 0.148 0.113896-0.182104 1.69e-17 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 1.58e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002832/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.74692981030797 normal_range exprsweb-alcohol-amount-drinksperweek-dbslmm-mgi-freeze3-20211120 exprsweb-alcohol-amount-drinksperweek-dbslmm-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_MGI-Freeze3_20211120 DrinksPerWeek DrinksPerWeek Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 232 0.62 0.000111233043979436 Beta -0.0474 -0.166176-0.071376 -0.0474 -0.166176-0.071376 -0.0583 -0.142776-0.026176 -0.0583 -0.142776-0.026176 -0.0315 -0.085792-0.022792 -0.0315 -0.085792-0.022792 -0.024 -0.063396-0.015396 -0.024 -0.063396-0.015396 0.0145 -0.012744-0.041744 0.0145 -0.012744-0.041744 -0.00237 -0.035886-0.031146 0.89 -0.0244 -0.057916-0.009116 0.152 0.00494 -0.028772-0.038652 0.774 FALSE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002833/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.75325117616296 normal_range exprsweb-alcohol-amount-drinksperweek-prscs-mgi-freeze3-20211120 exprsweb-alcohol-amount-drinksperweek-prscs-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_MGI-Freeze3_20211120 DrinksPerWeek DrinksPerWeek Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 1116497 1.4e-18 0.00381256682748409 Beta 0.246 0.127224-0.364776 0.246 0.127224-0.364776 0.221 0.136524-0.305476 0.221 0.136524-0.305476 0.155 0.100708-0.209292 0.155 0.100708-0.209292 0.141 0.101604-0.180396 0.141 0.101604-0.180396 0.123 0.095756-0.150244 0.123 0.095756-0.150244 0.0753 0.043156-0.107444 4.27e-06 0.0976 0.065064-0.130136 3.98e-09 0.181 0.147484-0.214516 5.04e-26 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 auto_traitAlcohol_Cons=umption_prefixDrinks=PerWeek https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002834/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.73738734768128 normal_range exprsweb-alcohol-amount-drinksperweek-lassosum-mgi-freeze3-20211120 exprsweb-alcohol-amount-drinksperweek-lassosum-mgi-freeze3-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_MGI-Freeze3_20211120 DrinksPerWeek DrinksPerWeek Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 524093 1.4e-18 0.00406647829381533 Beta 0.165 0.046224-0.283776 0.165 0.046224-0.283776 0.19 0.105524-0.274476 0.19 0.105524-0.274476 0.18 0.125708-0.234292 0.18 0.125708-0.234292 0.158 0.118604-0.197396 0.158 0.118604-0.197396 0.111 0.083756-0.138244 0.111 0.083756-0.138244 0.0968 0.064656-0.128944 3.66e-09 0.123 0.090856-0.155144 6.38e-14 0.182 0.148876-0.215124 5.62e-27 TRUE FALSE FALSE TRUE Both 13334 0 GRCh37/hg19 s=0.9;Lambda=0.00207 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002830/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 2.73740960773354 normal_range exprsweb-alcohol-amount-drinksperweek-pt-ukb-20211120 exprsweb-alcohol-amount-drinksperweek-pt-ukb-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_UKB_20211120 PT ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_UKB_20211120 DrinksPerWeek DrinksPerWeek Quantitative UKB UK Biobank C+T (DS) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 10706 0.045 0.000402920781674274 Beta 0.0018 -0.054648-0.058248 0.0018 -0.054648-0.058248 0.0231 -0.01708-0.06328 0.0231 -0.01708-0.06328 0.0173 -0.008572-0.043172 0.0173 -0.008572-0.043172 0.0162 -0.0025572-0.0349572 0.0162 -0.0025572-0.0349572 0.0199 0.0068856-0.0329144 0.0199 0.0068856-0.0329144 0.0215 0.0045068-0.0384932 0.0131 0.0318 0.015238-0.048362 0.000168 0.0377 0.0211576-0.0542424 7.9e-06 TRUE FALSE FALSE TRUE Both 60670 0 GRCh37/hg19 6.31e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002836/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PT_UKB_20211120/exclusion.tsv 2021-01-10 2272.45605494115 normal_range exprsweb-alcohol-amount-drinksperweek-plink-ukb-20211120 exprsweb-alcohol-amount-drinksperweek-plink-ukb-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_UKB_20211120 PLINK ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_UKB_20211120 DrinksPerWeek DrinksPerWeek Quantitative UKB UK Biobank C+T (GT) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 22675 0.011 0.000354163273039056 Beta 0.0132 -0.043248-0.069648 0.0132 -0.043248-0.069648 0.0271 -0.01308-0.06728 0.0271 -0.01308-0.06728 0.0238 -0.002072-0.049672 0.0238 -0.002072-0.049672 0.017 -0.0017572-0.0357572 0.017 -0.0017572-0.0357572 0.0203 0.0072856-0.0333144 0.0203 0.0072856-0.0333144 0.0287 0.0117656-0.0456344 0.000881 0.0311 0.0141264-0.0480736 0.000323 0.0408 0.02414-0.05746 1.53e-06 TRUE FALSE FALSE TRUE Both 60670 0 GRCh37/hg19 1.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002837/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 2272.36478601829 normal_range exprsweb-alcohol-amount-drinksperweek-dbslmm-ukb-20211120 exprsweb-alcohol-amount-drinksperweek-dbslmm-ukb-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_UKB_20211120 DrinksPerWeek DrinksPerWeek Quantitative UKB UK Biobank DBSLMM Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 137 0.43 3.00917795406797e-05 Beta -0.0532 -0.109648-0.003248 -0.0532 -0.109648-0.003248 -0.0469 -0.08708--0.00672 -0.0469 -0.08708--0.00672 -0.0163 -0.03786-0.00526 -0.0163 -0.03786-0.00526 -0.021 -0.0397376--0.0022624 -0.021 -0.0397376--0.0022624 -0.0103 -0.0232948-0.0026948 -0.0103 -0.0232948-0.0026948 -0.00715 -0.0231044-0.0088044 0.379 0.000795 -0.013905-0.015495 0.916 -0.0119 -0.0273644-0.0035644 0.131 FALSE TRUE FALSE TRUE Both 60670 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002838/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 2272.5833197765 normal_range exprsweb-alcohol-amount-drinksperweek-prscs-ukb-20211120 exprsweb-alcohol-amount-drinksperweek-prscs-ukb-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_UKB_20211120 PRSCS ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_UKB_20211120 DrinksPerWeek DrinksPerWeek Quantitative UKB UK Biobank PRS-CS Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 1117376 0.00019 0.000340649233454996 Beta 0.0282 -0.028248-0.084648 0.0282 -0.028248-0.084648 0.0206 -0.01958-0.06078 0.0206 -0.01958-0.06078 0.0328 0.006928-0.058672 0.0328 0.006928-0.058672 0.0275 0.0087232-0.0462768 0.0275 0.0087232-0.0462768 0.022 0.0089856-0.0350144 0.022 0.0089856-0.0350144 0.0187 0.0013148-0.0360852 0.0349 0.0375 0.0210752-0.0539248 7.45e-06 0.041 0.0244968-0.0575032 1.12e-06 TRUE FALSE FALSE TRUE Both 60670 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002839/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 2272.08638124514 normal_range exprsweb-alcohol-amount-drinksperweek-lassosum-ukb-20211120 exprsweb-alcohol-amount-drinksperweek-lassosum-ukb-20211120 ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_UKB_20211120 DrinksPerWeek DrinksPerWeek Quantitative UKB UK Biobank lassosum Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/DrinksPerWeek.txt.gz?sequence=32&isAllowed=y 524875 0.0055 0.000427202059996105 Beta 0.0309 -0.025548-0.087348 0.0309 -0.025548-0.087348 0.0235 -0.01668-0.06368 0.0235 -0.01668-0.06368 0.0207 -0.005172-0.046572 0.0207 -0.005172-0.046572 0.0231 0.0043232-0.0418768 0.0231 0.0043232-0.0418768 0.0183 0.0052856-0.0313144 0.0183 0.0052856-0.0313144 0.0197 0.002354-0.037046 0.0259 0.0406 0.0243908-0.0568092 9.05e-07 0.0393 0.0225224-0.0560776 4.38e-06 TRUE FALSE FALSE TRUE Both 60670 0 GRCh37/hg19 s=0.9;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002835/ScoringFiles/ phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Alcohol-Amount_DrinksPerWeek_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 2272.31802382103 normal_range exprsweb-fpg-fgovertime-corrected-pt-mgi-freeze3-20211120 exprsweb-fpg-fgovertime-corrected-pt-mgi-freeze3-20211120 ExPRSweb_FPG_FGovertime-corrected_PT_MGI-Freeze3_20211120 PT ExPRSweb_FPG_FGovertime-corrected_PT_MGI-Freeze3_20211120 FGovertime-corrected Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 13 0.37 0.00597468551157978 Beta 0.453 -0.26044-1.16644 0.453 -0.26044-1.16644 0.179 -0.32864-0.68664 0.179 -0.32864-0.68664 0.0121 -0.31326-0.33746 0.0121 -0.31326-0.33746 -0.0982 -0.34124-0.14484 -0.0982 -0.34124-0.14484 -0.15 -0.318364-0.018364 -0.15 -0.318364-0.018364 0.129 -0.06112-0.31912 0.184 0.242 -0.052-0.536 0.107 -0.0337 -0.23362-0.16622 0.74 FALSE TRUE FALSE TRUE Both 286 0 GRCh37/hg19 1.26e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002925/ScoringFiles/ phewas/ExPRSweb_FPG_FGovertime-corrected_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_FGovertime-corrected_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 100.925239509372 normal_range 0.01 100 mg/dl exprsweb-fpg-fgovertime-corrected-plink-mgi-freeze3-20211120 exprsweb-fpg-fgovertime-corrected-plink-mgi-freeze3-20211120 ExPRSweb_FPG_FGovertime-corrected_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_FPG_FGovertime-corrected_PLINK_MGI-Freeze3_20211120 FGovertime-corrected Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 13 0.66 0.00697547338907161 Beta -0.0743 -0.78774-0.63914 -0.0743 -0.78774-0.63914 -0.322 -0.8316-0.1876 -0.322 -0.8316-0.1876 -0.0647 -0.3979-0.2685 -0.0647 -0.3979-0.2685 0.0268 -0.21624-0.26984 0.0268 -0.21624-0.26984 -0.145 -0.312776-0.022776 -0.145 -0.312776-0.022776 -0.0578 -0.26948-0.15388 0.592 0.0603 -0.1553-0.2759 0.583 -0.157 -0.36084-0.04684 0.131 FALSE FALSE FALSE TRUE Both 286 0 GRCh37/hg19 5.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002926/ScoringFiles/ phewas/ExPRSweb_FPG_FGovertime-corrected_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_FGovertime-corrected_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 101.148821707208 normal_range 0.01 100 mg/dl exprsweb-fpg-fgovertime-corrected-dbslmm-mgi-freeze3-20211120 exprsweb-fpg-fgovertime-corrected-dbslmm-mgi-freeze3-20211120 ExPRSweb_FPG_FGovertime-corrected_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_FPG_FGovertime-corrected_DBSLMM_MGI-Freeze3_20211120 FGovertime-corrected Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 5106 0.66 0.00206154180132783 Beta -0.0478 -0.7632-0.6676 -0.0478 -0.7632-0.6676 0.0227 -0.4869-0.5323 0.0227 -0.4869-0.5323 -0.0015 -0.3347-0.3317 -0.0015 -0.3347-0.3317 -0.077 -0.32004-0.16604 -0.077 -0.32004-0.16604 -0.12 -0.28856-0.04856 -0.12 -0.28856-0.04856 0.11 -0.10756-0.32756 0.319 0.00626 -0.19562-0.20814 0.952 -0.0951 -0.30482-0.11462 0.374 FALSE TRUE FALSE TRUE Both 286 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002927/ScoringFiles/ phewas/ExPRSweb_FPG_FGovertime-corrected_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_FGovertime-corrected_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 101.1508257104 normal_range 0.01 100 mg/dl exprsweb-fpg-fgovertime-corrected-prscs-mgi-freeze3-20211120 exprsweb-fpg-fgovertime-corrected-prscs-mgi-freeze3-20211120 ExPRSweb_FPG_FGovertime-corrected_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_FPG_FGovertime-corrected_PRSCS_MGI-Freeze3_20211120 FGovertime-corrected Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 392 0.36 0.00172574926466074 Beta -0.541 -1.25836-0.17636 -0.541 -1.25836-0.17636 -0.349 -0.86056-0.16256 -0.349 -0.86056-0.16256 -0.029 -0.36612-0.30812 -0.029 -0.36612-0.30812 -0.0622 -0.3072-0.1828 -0.0622 -0.3072-0.1828 -0.0803 -0.25082-0.09022 -0.0803 -0.25082-0.09022 -0.295 -0.49296--0.09704 0.0034 -0.0253 -0.23698-0.18638 0.814 -0.168 -0.37968-0.04368 0.12 FALSE TRUE FALSE TRUE Both 286 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002928/ScoringFiles/ phewas/ExPRSweb_FPG_FGovertime-corrected_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_FGovertime-corrected_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 100.909601535924 normal_range 0.01 100 mg/dl exprsweb-fpg-fgovertime-corrected-lassosum-mgi-freeze3-20211120 exprsweb-fpg-fgovertime-corrected-lassosum-mgi-freeze3-20211120 ExPRSweb_FPG_FGovertime-corrected_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_FPG_FGovertime-corrected_LASSOSUM_MGI-Freeze3_20211120 FGovertime-corrected Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 281 0.96 0.000900518020340502 Beta 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 0.0404 -0.5182-0.599 FALSE TRUE FALSE TRUE Both 286 0 GRCh37/hg19 s=0.2;Lambda=0.02976 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002924/ScoringFiles/ phewas/ExPRSweb_FPG_FGovertime-corrected_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_FGovertime-corrected_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 101.220506352579 normal_range 0.01 100 mg/dl exprsweb-glucose-fgovertime-corrected-pt-ukb-20211120 exprsweb-glucose-fgovertime-corrected-pt-ukb-20211120 ExPRSweb_Glucose_FGovertime-corrected_PT_UKB_20211120 PT ExPRSweb_Glucose_FGovertime-corrected_PT_UKB_20211120 FGovertime-corrected Fast Plasma glucose Quantitative UKB UK Biobank C+T (DS) Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 1479 0.87 4.14991091275679e-05 Beta 0.00299 -0.105202-0.111182 0.00299 -0.105202-0.111182 -0.00392 -0.080752-0.072912 -0.00392 -0.080752-0.072912 -0.0889 -0.13986--0.03794 -0.0889 -0.13986--0.03794 -0.0308 -0.06706-0.00546 -0.0308 -0.06706-0.00546 0.0209 -0.003796-0.045596 0.0209 -0.003796-0.045596 0.0833 0.052724-0.113876 1e-07 0.0627 0.031928-0.093472 6.5e-05 0.0699 0.039128-0.100672 8.1e-06 FALSE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002945/ScoringFiles/ phewas/ExPRSweb_Glucose_FGovertime-corrected_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_FGovertime-corrected_PT_UKB_20211120/exclusion.tsv 2021-01-10 1.45103984617228 normal_range 0.01 100 mmol/L exprsweb-glucose-fgovertime-corrected-plink-ukb-20211120 exprsweb-glucose-fgovertime-corrected-plink-ukb-20211120 ExPRSweb_Glucose_FGovertime-corrected_PLINK_UKB_20211120 PLINK ExPRSweb_Glucose_FGovertime-corrected_PLINK_UKB_20211120 FGovertime-corrected Fast Plasma glucose Quantitative UKB UK Biobank C+T (GT) Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 1554 0.9 3.44740631881751e-05 Beta -0.157 -0.272052--0.041948 -0.157 -0.272052--0.041948 -0.168 -0.249928--0.086072 -0.168 -0.249928--0.086072 -0.00827 -0.057858-0.041318 -0.00827 -0.057858-0.041318 0.00484 -0.031028-0.040708 0.00484 -0.031028-0.040708 0.0548 0.030104-0.079496 0.0548 0.030104-0.079496 0.0389 0.008128-0.069672 0.013 0.0195 -0.011272-0.050272 0.21 0.0753 0.04492-0.10568 1.3e-06 FALSE TRUE FALSE TRUE Both 173111 0 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002946/ScoringFiles/ phewas/ExPRSweb_Glucose_FGovertime-corrected_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_FGovertime-corrected_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 1.45103993623252 normal_range 0.01 100 mmol/L exprsweb-glucose-fgovertime-corrected-dbslmm-ukb-20211120 exprsweb-glucose-fgovertime-corrected-dbslmm-ukb-20211120 ExPRSweb_Glucose_FGovertime-corrected_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Glucose_FGovertime-corrected_DBSLMM_UKB_20211120 FGovertime-corrected Fast Plasma glucose Quantitative UKB UK Biobank DBSLMM Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 1501 0.12 8.96153622215387e-06 Beta 0.00928 -0.099108-0.117668 0.00928 -0.099108-0.117668 -0.0391 -0.1175-0.0393 -0.0391 -0.1175-0.0393 0.0705 0.022088-0.118912 0.0705 0.022088-0.118912 0.0881 0.053016-0.123184 0.0881 0.053016-0.123184 0.032 0.007304-0.056696 0.032 0.007304-0.056696 -0.0527 -0.08308--0.02232 0.00068 -0.0656 -0.096176--0.035024 2.6e-05 -0.00731 -0.037494-0.022874 0.64 FALSE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002947/ScoringFiles/ phewas/ExPRSweb_Glucose_FGovertime-corrected_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_FGovertime-corrected_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 1.45102005855642 normal_range 0.01 100 mmol/L exprsweb-glucose-fgovertime-corrected-prscs-ukb-20211120 exprsweb-glucose-fgovertime-corrected-prscs-ukb-20211120 ExPRSweb_Glucose_FGovertime-corrected_PRSCS_UKB_20211120 PRSCS ExPRSweb_Glucose_FGovertime-corrected_PRSCS_UKB_20211120 FGovertime-corrected Fast Plasma glucose Quantitative UKB UK Biobank PRS-CS Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 392 0.66 1.45217206412398e-07 Beta 0.054 -0.052232-0.160232 0.054 -0.052232-0.160232 0.0378 -0.038248-0.113848 0.0378 -0.038248-0.113848 -0.0623 -0.112672--0.011928 -0.0623 -0.112672--0.011928 -0.0116 -0.047664-0.024464 -0.0116 -0.047664-0.024464 -0.00398 -0.028872-0.020912 -0.00398 -0.028872-0.020912 0.0745 0.04412-0.10488 1.5e-06 0.0213 -0.009472-0.052072 0.17 0.0284 -0.002372-0.059172 0.07 FALSE TRUE FALSE TRUE Both 173111 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002948/ScoringFiles/ phewas/ExPRSweb_Glucose_FGovertime-corrected_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_FGovertime-corrected_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 1.45103838805767 normal_range 0.01 100 mmol/L exprsweb-glucose-fgovertime-corrected-lassosum-ukb-20211120 exprsweb-glucose-fgovertime-corrected-lassosum-ukb-20211120 ExPRSweb_Glucose_FGovertime-corrected_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Glucose_FGovertime-corrected_LASSOSUM_UKB_20211120 FGovertime-corrected Fast Plasma glucose Quantitative UKB UK Biobank lassosum Large GWAS 31263163 ftp://ftp.sanger.ac.uk/pub/magic/Longitudinal_2019/FGovertime_corrected_meta_filtered_ready.txt.gz 519 0.76 4.66998486160324e-05 Beta 0.0528 -0.053432-0.159032 0.0528 -0.053432-0.159032 0.0484 -0.027452-0.124252 0.0484 -0.027452-0.124252 0.0406 -0.008204-0.089404 0.0406 -0.008204-0.089404 -0.00186 -0.037728-0.034008 -0.00186 -0.037728-0.034008 0.0261 0.001404-0.050796 0.0261 0.001404-0.050796 0.0334 0.002824-0.063976 0.032 0.0217 -0.008876-0.052276 0.17 0.0453 0.014724-0.075876 0.0038 FALSE TRUE FALSE TRUE Both 173111 0 GRCh37/hg19 s=0.2;Lambda=0.01833 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002944/ScoringFiles/ phewas/ExPRSweb_Glucose_FGovertime-corrected_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_FGovertime-corrected_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 1.4510392786755 normal_range 0.01 100 mmol/L exprsweb-apnoea-g6-sleepapno-pt-mgi-freeze3-20211120 exprsweb-apnoea-g6-sleepapno-pt-mgi-freeze3-20211120 ExPRSweb_apnoea_G6-SLEEPAPNO_PT_MGI-Freeze3_20211120 PT ExPRSweb_apnoea_G6-SLEEPAPNO_PT_MGI-Freeze3_20211120 G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 40992 1.2e-05 0.00110332 0.182 0.519 0.51-0.528 OR 1.18 0.956-1.46 1.18 0.956-1.46 1.09 0.937-1.28 1.09 0.937-1.28 1.13 1.03-1.25 1.13 1.03-1.25 1.12 1.04-1.21 1.12 1.04-1.21 1.12 1.06-1.18 1.12 1.06-1.18 1.07 1.01-1.14 0.0289 1.09 1.02-1.16 0.0101 1.18 1.11-1.26 2.49e-07 TRUE FALSE FALSE TRUE Both 5443 15911 GRCh37/hg19 3.98e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003210/ScoringFiles/ phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182367564204544 binary_exposure exprsweb-apnoea-g6-sleepapno-plink-mgi-freeze3-20211120 exprsweb-apnoea-g6-sleepapno-plink-mgi-freeze3-20211120 ExPRSweb_apnoea_G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_apnoea_G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120 G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 39223 0.00024 0.00139181 0.182 0.515 0.506-0.525 OR 1.15 0.924-1.42 1.15 0.924-1.42 1.19 1.02-1.38 1.19 1.02-1.38 1.24 1.12-1.36 1.24 1.12-1.36 1.16 1.08-1.24 1.16 1.08-1.24 1.08 1.03-1.14 1.08 1.03-1.14 1.08 1.02-1.16 0.0143 1.15 1.08-1.22 1.97e-05 1.16 1.09-1.24 3.58e-06 TRUE FALSE FALSE TRUE Both 5443 15911 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003211/ScoringFiles/ phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182407699979252 binary_exposure exprsweb-apnoea-g6-sleepapno-dbslmm-mgi-freeze3-20211120 exprsweb-apnoea-g6-sleepapno-dbslmm-mgi-freeze3-20211120 ExPRSweb_apnoea_G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_apnoea_G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120 G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7601206 0.4 0.000296162 0.183 0.496 0.487-0.504 OR 1.28 1.04-1.59 1.28 1.04-1.59 1.13 0.969-1.32 1.13 0.969-1.32 1.09 0.986-1.21 1.09 0.986-1.21 1.08 1-1.16 1.08 1-1.16 1.03 0.982-1.09 1.03 0.982-1.09 1.04 0.979-1.11 0.198 1.05 0.988-1.12 0.112 1.07 1-1.13 0.0499 FALSE FALSE FALSE TRUE Both 5443 15911 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003212/ScoringFiles/ phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182526393679552 binary_exposure exprsweb-apnoea-g6-sleepapno-prscs-mgi-freeze3-20211120 exprsweb-apnoea-g6-sleepapno-prscs-mgi-freeze3-20211120 ExPRSweb_apnoea_G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_apnoea_G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120 G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1111194 5.8e-10 0.00264891 0.182 0.527 0.517-0.536 OR 1.23 0.996-1.52 1.23 0.996-1.52 1.24 1.06-1.44 1.24 1.06-1.44 1.26 1.14-1.39 1.26 1.14-1.39 1.23 1.15-1.32 1.23 1.15-1.32 1.19 1.13-1.25 1.19 1.13-1.25 1.14 1.07-1.22 8.25e-05 1.18 1.11-1.26 2.8e-07 1.33 1.25-1.42 4.1e-18 TRUE FALSE FALSE TRUE Both 5443 15911 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003213/ScoringFiles/ phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182195881208994 binary_exposure exprsweb-apnoea-g6-sleepapno-lassosum-mgi-freeze3-20211120 exprsweb-apnoea-g6-sleepapno-lassosum-mgi-freeze3-20211120 ExPRSweb_apnoea_G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_apnoea_G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120 G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 328671 0.0014 0.00151005 0.182 0.514 0.506-0.523 OR 1.26 1.02-1.56 1.26 1.02-1.56 1.23 1.06-1.43 1.23 1.06-1.43 1.2 1.09-1.32 1.2 1.09-1.32 1.11 1.04-1.2 1.11 1.04-1.2 1.09 1.04-1.15 1.09 1.04-1.15 1.01 0.944-1.07 0.838 1.11 1.04-1.18 0.00114 1.13 1.06-1.21 0.000137 TRUE FALSE FALSE TRUE Both 5443 15911 GRCh37/hg19 s=1;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003209/ScoringFiles/ phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.18243816485541 binary_exposure exprsweb-height-giant-yang2012-height-pt-mgi-freeze3-20211120 exprsweb-height-giant-yang2012-height-pt-mgi-freeze3-20211120 ExPRSweb_Height_GIANT-Yang2012-height_PT_MGI-Freeze3_20211120 PT ExPRSweb_Height_GIANT-Yang2012-height_PT_MGI-Freeze3_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 22154 0.0024 0.000896321460091615 Beta 0.161 0.091616-0.230384 0.161 0.091616-0.230384 0.114 0.059316-0.168684 0.114 0.059316-0.168684 0.0711 0.034448-0.107752 0.0711 0.034448-0.107752 0.0281 0.0036-0.0526 0.0281 0.0036-0.0526 0.00985 -0.0056144-0.0253144 0.00985 -0.0056144-0.0253144 0.0263 0.0088952-0.0437048 0.00308 0.0279 0.0102404-0.0455596 0.00199 0.0152 -0.003518-0.033918 0.111 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 6.31e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002975/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.3070545164009 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-plink-mgi-freeze3-20211120 exprsweb-height-giant-yang2012-height-plink-mgi-freeze3-20211120 ExPRSweb_Height_GIANT-Yang2012-height_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Height_GIANT-Yang2012-height_PLINK_MGI-Freeze3_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 22443 0.001 0.000926546917840613 Beta 0.148 0.07842-0.21758 0.148 0.07842-0.21758 0.123 0.06812-0.17788 0.123 0.06812-0.17788 0.0779 0.041052-0.114748 0.0779 0.041052-0.114748 0.0267 0.002004-0.051396 0.0267 0.002004-0.051396 0.0141 -0.001384-0.029584 0.0141 -0.001384-0.029584 0.0244 0.0069756-0.0418244 0.00604 0.0264 0.0087796-0.0440204 0.0033 0.0181 -0.000618-0.036818 0.0578 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 6.31e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002976/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.3038747616458 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-dbslmm-mgi-freeze3-20211120 exprsweb-height-giant-yang2012-height-dbslmm-mgi-freeze3-20211120 ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_MGI-Freeze3_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 1851736 0.071 3.28019402394334e-09 Beta -0.000323 -0.061671-0.061025 -0.000323 -0.061671-0.061025 0.017 -0.026512-0.060512 0.017 -0.026512-0.060512 0.00845 -0.019578-0.036478 0.00845 -0.019578-0.036478 0.0116 -0.008784-0.031984 0.0116 -0.008784-0.031984 0.00874 -0.0053524-0.0228324 0.00874 -0.0053524-0.0228324 -0.00727 -0.024518-0.009978 0.408 0.00419 -0.013058-0.021438 0.634 0.0077 -0.0095872-0.0249872 0.383 FALSE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002977/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.3188802331873 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-prscs-mgi-freeze3-20211120 exprsweb-height-giant-yang2012-height-prscs-mgi-freeze3-20211120 ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_MGI-Freeze3_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 996356 0.025 0.000674295563914602 Beta 0.0195 -0.043612-0.082612 0.0195 -0.043612-0.082612 -0.000928 -0.046204-0.044348 -0.000928 -0.046204-0.044348 0.0217 -0.0077-0.0511 0.0217 -0.0077-0.0511 0.0205 -0.000864-0.041864 0.0205 -0.000864-0.041864 0.00596 -0.0086812-0.0206012 0.00596 -0.0086812-0.0206012 0.0164 -0.0009656-0.0337656 0.0637 0.00564 -0.011804-0.023084 0.527 0.00396 -0.0140916-0.0220116 0.667 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002978/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.3154028978837 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-lassosum-mgi-freeze3-20211120 exprsweb-height-giant-yang2012-height-lassosum-mgi-freeze3-20211120 ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_MGI-Freeze3_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 66842 0.12 0.000477646116350092 Beta -0.00429 -0.066814-0.058234 -0.00429 -0.066814-0.058234 0.00643 -0.038062-0.050922 0.00643 -0.038062-0.050922 0.00593 -0.022882-0.034742 0.00593 -0.022882-0.034742 0.0161 -0.004872-0.037072 0.0161 -0.004872-0.037072 0.00327 -0.0112536-0.0177936 0.00327 -0.0112536-0.0177936 0.0155 -0.0018068-0.0328068 0.0799 0.00295 -0.0145528-0.0204528 0.741 0.00183 -0.0162216-0.0198816 0.843 FALSE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 s=0.9;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002974/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 46.3205205910407 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-pt-ukb-20211120 exprsweb-height-giant-yang2012-height-pt-ukb-20211120 ExPRSweb_Height_GIANT-Yang2012-height_PT_UKB_20211120 PT ExPRSweb_Height_GIANT-Yang2012-height_PT_UKB_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex UKB UK Biobank C+T (DS) Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 31267 2.3e-05 9.95232419646428e-05 Beta 0.027 0.005832-0.048168 0.027 0.005832-0.048168 0.0112 -0.0038136-0.0262136 0.0112 -0.0038136-0.0262136 0.0163 0.0066568-0.0259432 0.0163 0.0066568-0.0259432 0.00898 0.0019632-0.0159968 0.00898 0.0019632-0.0159968 0.00635 0.0014892-0.0112108 0.00635 0.0014892-0.0112108 0.0095 0.0035612-0.0154388 0.00171 0.017 0.0110416-0.0229584 2.4e-08 0.015 0.009022-0.020978 8.34e-07 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002985/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_PT_UKB_20211120/exclusion.tsv 2021-01-10 39.8708993018742 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-plink-ukb-20211120 exprsweb-height-giant-yang2012-height-plink-ukb-20211120 ExPRSweb_Height_GIANT-Yang2012-height_PLINK_UKB_20211120 PLINK ExPRSweb_Height_GIANT-Yang2012-height_PLINK_UKB_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex UKB UK Biobank C+T (GT) Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 31700 1.9e-05 0.000101777728090726 Beta 0.0264 0.005232-0.047568 0.0264 0.005232-0.047568 0.012 -0.0030136-0.0270136 0.012 -0.0030136-0.0270136 0.0112 0.0015568-0.0208432 0.0112 0.0015568-0.0208432 0.0109 0.0038832-0.0179168 0.0109 0.0038832-0.0179168 0.00751 0.0026492-0.0123708 0.00751 0.0026492-0.0123708 0.0111 0.0051612-0.0170388 0.000259 0.0159 0.0099416-0.0218584 1.83e-07 0.0163 0.010322-0.022278 7.98e-08 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002986/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 39.8708157827376 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-dbslmm-ukb-20211120 exprsweb-height-giant-yang2012-height-dbslmm-ukb-20211120 ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_UKB_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex UKB UK Biobank DBSLMM Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 1661426 2.21026859398762e-308 0.00277862177261649 Beta 0.142 0.120832-0.163168 0.142 0.120832-0.163168 0.145 0.130006-0.159994 0.145 0.130006-0.159994 0.124 0.1143764-0.1336236 0.124 0.1143764-0.1336236 0.107 0.1000028-0.1139972 0.107 0.1000028-0.1139972 0.0935 0.0886588-0.0983412 0.0935 0.0886588-0.0983412 0.0496 0.0437004-0.0554996 8.38e-61 0.086 0.0800808-0.0919192 2.64e-178 0.139 0.1330808-0.1449192 1e-459 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002987/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 39.5996936647916 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-prscs-ukb-20211120 exprsweb-height-giant-yang2012-height-prscs-ukb-20211120 ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_UKB_20211120 PRSCS ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_UKB_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex UKB UK Biobank PRS-CS Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 996840 4.9e-13188 0.10560694207736 Beta 0.892 0.871028-0.912972 0.892 0.871028-0.912972 0.826 0.811202-0.840798 0.826 0.811202-0.840798 0.72 0.7106116-0.7293884 0.72 0.7106116-0.7293884 0.647 0.6402772-0.6537228 0.647 0.6402772-0.6537228 0.559 0.5544528-0.5635472 0.559 0.5544528-0.5635472 0.303 0.2977668-0.3082332 1e-2800 0.516 0.5107276-0.5212724 1e-7990 0.833 0.8275708-0.8384292 1e-19600 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002988/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 30.7170801895016 normal_range cm stratify by Sex exprsweb-height-giant-yang2012-height-lassosum-ukb-20211120 exprsweb-height-giant-yang2012-height-lassosum-ukb-20211120 ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_UKB_20211120 GIANT-Yang2012-height Height Quantitative stratify by Sex UKB UK Biobank lassosum Large GWAS 22982992 wget https://portals.broadinstitute.org/collaboration/giant/images/b/b0/GIANT_Yang2012Nature_publicrelease_HapMapCeuFreq_Height.txt.gz 67333 4.2e-10589 0.0905228443124492 Beta 0.823 0.802028-0.843972 0.823 0.802028-0.843972 0.756 0.7411628-0.7708372 0.756 0.7411628-0.7708372 0.662 0.6525724-0.6714276 0.662 0.6525724-0.6714276 0.591 0.584238-0.597762 0.591 0.584238-0.597762 0.51 0.505394-0.514606 0.51 0.505394-0.514606 0.279 0.2736492-0.2843508 1e-2280 0.475 0.46961-0.48039 1e-6500 0.762 0.7564728-0.7675272 1e-15900 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 s=0.5;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002984/ScoringFiles/ phewas/ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Height_GIANT-Yang2012-height_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 32.17349768374 normal_range cm stratify by Sex exprsweb-hypertension-i10-pt-mgi-freeze3-20211120 exprsweb-hypertension-i10-pt-mgi-freeze3-20211120 ExPRSweb_Hypertension_I10_PT_MGI-Freeze3_20211120 PT ExPRSweb_Hypertension_I10_PT_MGI-Freeze3_20211120 I10 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 58725 6.4e-06 0.000537688 0.192 0.522 0.513-0.53 OR 1.17 0.949-1.44 1.17 0.949-1.44 1.16 1-1.35 1.16 1-1.35 1.12 1.02-1.23 1.12 1.02-1.23 1.09 1.02-1.17 1.09 1.02-1.17 1.08 1.03-1.14 1.08 1.03-1.14 1.09 1.03-1.16 0.0045 1.11 1.05-1.18 0.000459 1.15 1.09-1.22 1.96e-06 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003015/ScoringFiles/ phewas/ExPRSweb_Hypertension_I10_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_I10_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191730247280489 binary_exposure exprsweb-hypertension-i10-plink-mgi-freeze3-20211120 exprsweb-hypertension-i10-plink-mgi-freeze3-20211120 ExPRSweb_Hypertension_I10_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Hypertension_I10_PLINK_MGI-Freeze3_20211120 I10 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 56978 2e-05 0.000590956 0.192 0.521 0.512-0.53 OR 1.09 0.885-1.35 1.09 0.885-1.35 1.15 0.995-1.34 1.15 0.995-1.34 1.18 1.08-1.3 1.18 1.08-1.3 1.06 0.99-1.14 1.06 0.99-1.14 1.08 1.03-1.14 1.08 1.03-1.14 1.09 1.02-1.15 0.00664 1.1 1.03-1.16 0.00225 1.17 1.1-1.24 3.26e-07 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 7.94e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003016/ScoringFiles/ phewas/ExPRSweb_Hypertension_I10_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_I10_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.19175061985089 binary_exposure exprsweb-hypertension-i10-dbslmm-mgi-freeze3-20211120 exprsweb-hypertension-i10-dbslmm-mgi-freeze3-20211120 ExPRSweb_Hypertension_I10_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Hypertension_I10_DBSLMM_MGI-Freeze3_20211120 I10 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 7094727 0.7 1.12472e-05 0.192 0.492 0.484-0.502 OR 0.928 0.755-1.14 0.928 0.755-1.14 1.07 0.925-1.24 1.07 0.925-1.24 1.05 0.951-1.15 1.05 0.951-1.15 1.04 0.972-1.12 1.04 0.972-1.12 1.02 0.971-1.07 1.02 0.971-1.07 0.976 0.921-1.03 0.416 0.994 0.938-1.05 0.851 1.01 0.948-1.07 0.859 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003017/ScoringFiles/ phewas/ExPRSweb_Hypertension_I10_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_I10_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191899038354692 binary_exposure exprsweb-hypertension-i10-prscs-mgi-freeze3-20211120 exprsweb-hypertension-i10-prscs-mgi-freeze3-20211120 ExPRSweb_Hypertension_I10_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Hypertension_I10_PRSCS_MGI-Freeze3_20211120 I10 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 1096197 7.7e-06 0.000470374 0.192 0.519 0.51-0.527 OR 1.14 0.923-1.41 1.14 0.923-1.41 1.09 0.937-1.26 1.09 0.937-1.26 1.13 1.03-1.25 1.13 1.03-1.25 1.1 1.03-1.18 1.1 1.03-1.18 1.12 1.07-1.18 1.12 1.07-1.18 1.09 1.03-1.15 0.00519 1.09 1.02-1.15 0.00571 1.18 1.12-1.25 1.82e-08 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003018/ScoringFiles/ phewas/ExPRSweb_Hypertension_I10_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_I10_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191743676611685 binary_exposure exprsweb-hypertension-i10-lassosum-mgi-freeze3-20211120 exprsweb-hypertension-i10-lassosum-mgi-freeze3-20211120 ExPRSweb_Hypertension_I10_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Hypertension_I10_LASSOSUM_MGI-Freeze3_20211120 I10 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 lassosum UK Biobank GWAS UKB_GWAS http://www.nealelab.is/uk-biobank 294142 2.4e-05 0.00062404 0.192 0.517 0.509-0.526 OR 1.12 0.906-1.37 1.12 0.906-1.37 1.13 0.972-1.31 1.13 0.972-1.31 1.15 1.04-1.26 1.15 1.04-1.26 1.11 1.03-1.19 1.11 1.03-1.19 1.09 1.04-1.14 1.09 1.04-1.14 1.07 1.01-1.14 0.0239 1.13 1.07-1.2 4.46e-05 1.16 1.09-1.23 1.31e-06 TRUE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 s=0.5;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003014/ScoringFiles/ phewas/ExPRSweb_Hypertension_I10_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_I10_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191762557664056 binary_exposure exprsweb-fpg-magic-fastingglucose-pt-mgi-freeze3-20211120 exprsweb-fpg-magic-fastingglucose-pt-mgi-freeze3-20211120 ExPRSweb_FPG_MAGIC-FastingGlucose_PT_MGI-Freeze3_20211120 PT ExPRSweb_FPG_MAGIC-FastingGlucose_PT_MGI-Freeze3_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 264 0.015 0.0688588689532948 Beta 0.584 -0.13924-1.30724 0.584 -0.13924-1.30724 0.242 -0.26956-0.75356 0.242 -0.26956-0.75356 0.526 0.19476-0.85724 0.526 0.19476-0.85724 0.4 0.155-0.645 0.4 0.155-0.645 0.299 0.130244-0.467756 0.299 0.130244-0.467756 0.19 -0.0158-0.3958 0.0695 0.402 0.19032-0.61368 0.000193 0.522 0.31424-0.72976 8.74e-07 TRUE FALSE FALSE TRUE Both 286 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002930/ScoringFiles/ phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 99.0653322274993 normal_range 0.01 100 mg/dl exprsweb-fpg-magic-fastingglucose-plink-mgi-freeze3-20211120 exprsweb-fpg-magic-fastingglucose-plink-mgi-freeze3-20211120 ExPRSweb_FPG_MAGIC-FastingGlucose_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_FPG_MAGIC-FastingGlucose_PLINK_MGI-Freeze3_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 273 0.0095 0.0795214293792063 Beta 0.584 -0.13924-1.30724 0.584 -0.13924-1.30724 0.688 0.18036-1.19564 0.688 0.18036-1.19564 0.451 0.1178-0.7842 0.451 0.1178-0.7842 0.393 0.14996-0.63604 0.393 0.14996-0.63604 0.324 0.155832-0.492168 0.324 0.155832-0.492168 0.302 0.09816-0.50584 0.00383 0.424 0.21428-0.63372 6.94e-05 0.538 0.3322-0.7438 2.87e-07 TRUE FALSE FALSE TRUE Both 286 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002931/ScoringFiles/ phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 98.796388238324 normal_range 0.01 100 mg/dl exprsweb-fpg-magic-fastingglucose-dbslmm-mgi-freeze3-20211120 exprsweb-fpg-magic-fastingglucose-dbslmm-mgi-freeze3-20211120 ExPRSweb_FPG_MAGIC-FastingGlucose_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_FPG_MAGIC-FastingGlucose_DBSLMM_MGI-Freeze3_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 1202301 0.53 0.00529519617588629 Beta -0.355 -1.0704-0.3604 -0.355 -1.0704-0.3604 -0.265 -0.7746-0.2446 -0.265 -0.7746-0.2446 0.026 -0.3072-0.3592 0.026 -0.3072-0.3592 -0.0958 -0.3408-0.1492 -0.0958 -0.3408-0.1492 0.0266 -0.14392-0.19712 0.0266 -0.14392-0.19712 0.122 -0.07596-0.31996 0.228 0.0989 -0.12454-0.32234 0.387 0.171 -0.04264-0.38464 0.115 FALSE TRUE FALSE TRUE Both 286 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002932/ScoringFiles/ phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 101.074444508373 normal_range 0.01 100 mg/dl exprsweb-fpg-magic-fastingglucose-prscs-mgi-freeze3-20211120 exprsweb-fpg-magic-fastingglucose-prscs-mgi-freeze3-20211120 ExPRSweb_FPG_MAGIC-FastingGlucose_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_FPG_MAGIC-FastingGlucose_PRSCS_MGI-Freeze3_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 1007415 0.077 0.049713230397732 Beta 0.0743 -0.64306-0.79166 0.0743 -0.64306-0.79166 0.424 -0.0856-0.9336 0.424 -0.0856-0.9336 0.298 -0.03324-0.62924 0.298 -0.03324-0.62924 0.274 0.029-0.519 0.274 0.029-0.519 0.263 0.094832-0.431168 0.263 0.094832-0.431168 0.213 0.0072-0.4188 0.0423 0.336 0.12824-0.54376 0.00159 0.46 0.24832-0.67168 2e-05 FALSE FALSE FALSE TRUE Both 286 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002933/ScoringFiles/ phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 100.080603619606 normal_range 0.01 100 mg/dl exprsweb-fpg-magic-fastingglucose-lassosum-mgi-freeze3-20211120 exprsweb-fpg-magic-fastingglucose-lassosum-mgi-freeze3-20211120 ExPRSweb_FPG_MAGIC-FastingGlucose_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_FPG_MAGIC-FastingGlucose_LASSOSUM_MGI-Freeze3_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 71791 0.17 0.0368598112745686 Beta 0.147 -0.57428-0.86828 0.147 -0.57428-0.86828 0.24 -0.2696-0.7496 0.24 -0.2696-0.7496 0.419 0.08776-0.75024 0.419 0.08776-0.75024 0.214 -0.03296-0.46096 0.214 -0.03296-0.46096 0.171 0.001264-0.340736 0.171 0.001264-0.340736 0.0132 -0.17986-0.20626 0.893 0.391 0.17344-0.60856 0.000448 0.303 0.0972-0.5088 0.00392 FALSE FALSE FALSE TRUE Both 286 0 GRCh37/hg19 s=1;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002929/ScoringFiles/ phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_FPG_MAGIC-FastingGlucose_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 100.539917686137 normal_range 0.01 100 mg/dl exprsweb-glucose-magic-fastingglucose-pt-ukb-20211120 exprsweb-glucose-magic-fastingglucose-pt-ukb-20211120 ExPRSweb_Glucose_MAGIC-FastingGlucose_PT_UKB_20211120 PT ExPRSweb_Glucose_MAGIC-FastingGlucose_PT_UKB_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative UKB UK Biobank C+T (DS) Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 38 1.2e-171 0.00446840858646067 Beta 0.445 0.351508-0.538492 0.445 0.351508-0.538492 0.338 0.269008-0.406992 0.338 0.269008-0.406992 0.434 0.390684-0.477316 0.434 0.390684-0.477316 0.366 0.333464-0.398536 0.366 0.333464-0.398536 0.317 0.293284-0.340716 0.317 0.293284-0.340716 0.216 0.183268-0.248732 2.4e-38 0.359 0.327052-0.390948 8.4e-108 0.516 0.484836-0.547164 1.7e-230 TRUE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002950/ScoringFiles/ phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_PT_UKB_20211120/exclusion.tsv 2021-01-10 1.44453147980408 normal_range 0.01 100 mmol/L exprsweb-glucose-magic-fastingglucose-plink-ukb-20211120 exprsweb-glucose-magic-fastingglucose-plink-ukb-20211120 ExPRSweb_Glucose_MAGIC-FastingGlucose_PLINK_UKB_20211120 PLINK ExPRSweb_Glucose_MAGIC-FastingGlucose_PLINK_UKB_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative UKB UK Biobank C+T (GT) Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 38 1.2e-171 0.00446840858646067 Beta 0.445 0.351508-0.538492 0.445 0.351508-0.538492 0.338 0.269008-0.406992 0.338 0.269008-0.406992 0.434 0.390684-0.477316 0.434 0.390684-0.477316 0.366 0.333464-0.398536 0.366 0.333464-0.398536 0.317 0.293284-0.340716 0.317 0.293284-0.340716 0.216 0.183268-0.248732 2.4e-38 0.359 0.327052-0.390948 8.4e-108 0.516 0.484836-0.547164 1.7e-230 TRUE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002951/ScoringFiles/ phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 1.44453147980408 normal_range 0.01 100 mmol/L exprsweb-glucose-magic-fastingglucose-dbslmm-ukb-20211120 exprsweb-glucose-magic-fastingglucose-dbslmm-ukb-20211120 ExPRSweb_Glucose_MAGIC-FastingGlucose_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Glucose_MAGIC-FastingGlucose_DBSLMM_UKB_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative UKB UK Biobank DBSLMM Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 1501 0.12 8.96153622215387e-06 Beta 0.00928 -0.099108-0.117668 0.00928 -0.099108-0.117668 -0.0391 -0.1175-0.0393 -0.0391 -0.1175-0.0393 0.0705 0.022088-0.118912 0.0705 0.022088-0.118912 0.0881 0.053016-0.123184 0.0881 0.053016-0.123184 0.032 0.007304-0.056696 0.032 0.007304-0.056696 -0.0527 -0.08308--0.02232 0.00068 -0.0656 -0.096176--0.035024 2.6e-05 -0.00731 -0.037494-0.022874 0.64 FALSE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002952/ScoringFiles/ phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 1.45102005855642 normal_range 0.01 100 mmol/L exprsweb-glucose-magic-fastingglucose-prscs-ukb-20211120 exprsweb-glucose-magic-fastingglucose-prscs-ukb-20211120 ExPRSweb_Glucose_MAGIC-FastingGlucose_PRSCS_UKB_20211120 PRSCS ExPRSweb_Glucose_MAGIC-FastingGlucose_PRSCS_UKB_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative UKB UK Biobank PRS-CS Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 1008035 5.4e-176 0.00471703737809763 Beta 0.619 0.530212-0.707788 0.619 0.530212-0.707788 0.662 0.59928-0.72472 0.662 0.59928-0.72472 0.585 0.543448-0.626552 0.585 0.543448-0.626552 0.535 0.50364-0.56636 0.535 0.50364-0.56636 0.459 0.435676-0.482324 0.459 0.435676-0.482324 0.223 0.189288-0.256712 1.7e-38 0.436 0.403464-0.468536 3.3e-152 0.688 0.65664-0.71936 1.3e-404 TRUE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002953/ScoringFiles/ phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 1.44436472181073 normal_range 0.01 100 mmol/L exprsweb-glucose-magic-fastingglucose-lassosum-ukb-20211120 exprsweb-glucose-magic-fastingglucose-lassosum-ukb-20211120 ExPRSweb_Glucose_MAGIC-FastingGlucose_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Glucose_MAGIC-FastingGlucose_LASSOSUM_UKB_20211120 MAGIC-FastingGlucose Fast Plasma glucose Quantitative UKB UK Biobank lassosum Large GWAS 20081858 ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt 72352 4.1e-185 0.00473069806566732 Beta 0.366 0.269568-0.462432 0.366 0.269568-0.462432 0.379 0.310792-0.447208 0.379 0.310792-0.447208 0.496 0.453272-0.538728 0.496 0.453272-0.538728 0.431 0.398856-0.463144 0.431 0.398856-0.463144 0.359 0.33548-0.38252 0.359 0.33548-0.38252 0.236 0.203072-0.268928 7.1e-45 0.354 0.321856-0.386144 5.4e-103 0.563 0.531836-0.594164 7.2e-274 TRUE FALSE FALSE TRUE Both 173111 0 GRCh37/hg19 s=0.5;Lambda=0.01438 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002949/ScoringFiles/ phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Glucose_MAGIC-FastingGlucose_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 1.44401640537129 normal_range 0.01 100 mmol/L exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-pt-ukb-20211120 exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-pt-ukb-20211120 ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PT_UKB_20211120 PT ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PT_UKB_20211120 MAGNETIC-otPUFA Polyunsaturated_Fatty_Acids Quantitative UKB UK Biobank C+T (DS) Large GWAS 27005778 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/KettunenJ_27005778_GCST003664/Summary_statistics_MAGNETIC_otPUFA.txt.gz 13 0.32 4.94282633371462e-05 Beta -0.0201 -0.066944-0.026744 -0.0201 -0.066944-0.026744 -0.00736 -0.04068-0.02596 -0.00736 -0.04068-0.02596 -0.0206 -0.041964-0.000764 -0.0206 -0.041964-0.000764 -0.0157 -0.0312232--0.0001768 -0.0157 -0.0312232--0.0001768 -0.00473 -0.0154904-0.0060304 -0.00473 -0.0154904-0.0060304 -0.00276 -0.0159508-0.0104308 0.682 -0.0133 -0.0264908--0.0001092 0.0482 -0.0101 -0.0232516-0.0030516 0.131 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 1.26e-17 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003040/ScoringFiles/ phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PT_UKB_20211120/exclusion.tsv 2021-01-10 53.3873539349529 normal_range g exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-plink-ukb-20211120 exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-plink-ukb-20211120 ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PLINK_UKB_20211120 PLINK ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PLINK_UKB_20211120 MAGNETIC-otPUFA Polyunsaturated_Fatty_Acids Quantitative UKB UK Biobank C+T (GT) Large GWAS 27005778 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/KettunenJ_27005778_GCST003664/Summary_statistics_MAGNETIC_otPUFA.txt.gz 13 0.61 5.8001668770074e-05 Beta 0.00316 -0.043684-0.050004 0.00316 -0.043684-0.050004 -0.00605 -0.03937-0.02727 -0.00605 -0.03937-0.02727 -0.00194 -0.023304-0.019424 -0.00194 -0.023304-0.019424 -0.00764 -0.0231632-0.0078832 -0.00764 -0.0231632-0.0078832 -0.0129 -0.0236604--0.0021396 -0.0129 -0.0236604--0.0021396 -0.000756 -0.013986-0.012474 0.911 -0.00926 -0.02249-0.00397 0.17 -0.0162 -0.0294104--0.0029896 0.0164 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 7.94e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003041/ScoringFiles/ phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 53.3877957211632 normal_range g exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-dbslmm-ukb-20211120 exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-dbslmm-ukb-20211120 ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_DBSLMM_UKB_20211120 MAGNETIC-otPUFA Polyunsaturated_Fatty_Acids Quantitative UKB UK Biobank DBSLMM Large GWAS 27005778 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/KettunenJ_27005778_GCST003664/Summary_statistics_MAGNETIC_otPUFA.txt.gz 272 0.41 1.97127651580561e-05 Beta -0.0278 -0.074644-0.019044 -0.0278 -0.074644-0.019044 -0.0012 -0.03452-0.03212 -0.0012 -0.03452-0.03212 -0.00333 -0.024694-0.018034 -0.00333 -0.024694-0.018034 -0.000254 -0.0157772-0.0152692 -0.000254 -0.0157772-0.0152692 -0.000537 -0.0112974-0.0102234 -0.000537 -0.0112974-0.0102234 0.00767 -0.0055208-0.0208608 0.254 0.00789 -0.005242-0.021022 0.239 0.00463 -0.0085216-0.0177816 0.49 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003042/ScoringFiles/ phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 53.3875400264265 normal_range g exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-prscs-ukb-20211120 exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-prscs-ukb-20211120 ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PRSCS_UKB_20211120 PRSCS ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PRSCS_UKB_20211120 MAGNETIC-otPUFA Polyunsaturated_Fatty_Acids Quantitative UKB UK Biobank PRS-CS Large GWAS 27005778 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/KettunenJ_27005778_GCST003664/Summary_statistics_MAGNETIC_otPUFA.txt.gz 1116151 0.89 2.35124771708761e-05 Beta 0.00652 -0.040324-0.053364 0.00652 -0.040324-0.053364 -0.00161 -0.03493-0.03171 -0.00161 -0.03493-0.03171 0.0015 -0.019864-0.022864 0.0015 -0.019864-0.022864 0.00148 -0.0140432-0.0170032 0.00148 -0.0140432-0.0170032 -0.00368 -0.0144404-0.0070804 -0.00368 -0.0144404-0.0070804 0.000731 -0.0124402-0.0139022 0.913 -0.00583 -0.0190012-0.0073412 0.385 -0.00559 -0.0187612-0.0075812 0.405 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003043/ScoringFiles/ phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 53.3879469286463 normal_range g exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-lassosum-ukb-20211120 exprsweb-polyunsaturated-fatty-acids-magnetic-otpufa-lassosum-ukb-20211120 ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_LASSOSUM_UKB_20211120 MAGNETIC-otPUFA Polyunsaturated_Fatty_Acids Quantitative UKB UK Biobank lassosum Large GWAS 27005778 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/KettunenJ_27005778_GCST003664/Summary_statistics_MAGNETIC_otPUFA.txt.gz 378933 0.34 2.75958986506275e-05 Beta -0.0479 -0.094744--0.001056 -0.0479 -0.094744--0.001056 -0.000767 -0.034087-0.032553 -0.000767 -0.034087-0.032553 -0.0164 -0.037764-0.004964 -0.0164 -0.037764-0.004964 -0.0118 -0.0273232-0.0037232 -0.0118 -0.0273232-0.0037232 -0.00793 -0.0186904-0.0028304 -0.00793 -0.0186904-0.0028304 -0.0163 -0.0294516--0.0031484 0.0153 -0.00457 -0.0178196-0.0086796 0.499 -0.015 -0.0281908--0.0018092 0.0262 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 s=0.2;Lambda=0.01438 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003039/ScoringFiles/ phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Polyunsaturated-Fatty-Acids_MAGNETIC-otPUFA_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 53.3873888425689 normal_range g exprsweb-t2d-metaanalysis-diagram-pt-mgi-freeze3-20211120 exprsweb-t2d-metaanalysis-diagram-pt-mgi-freeze3-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_MGI-Freeze3_20211120 PT ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_MGI-Freeze3_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 187 5.1e-54 0.0182974 0.143 0.572 0.555-0.588 OR 2.12 1.69-2.64 2.12 1.69-2.64 1.99 1.69-2.33 1.99 1.69-2.33 1.77 1.6-1.97 1.77 1.6-1.97 1.61 1.49-1.74 1.61 1.49-1.74 1.55 1.47-1.64 1.55 1.47-1.64 1.24 1.15-1.34 4.63e-08 1.62 1.51-1.75 8.53e-37 2.01 1.87-2.16 2.68e-77 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003105/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.143156480613409 binary_exposure exprsweb-t2d-metaanalysis-diagram-plink-mgi-freeze3-20211120 exprsweb-t2d-metaanalysis-diagram-plink-mgi-freeze3-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_MGI-Freeze3_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 187 5.1e-54 0.0182974 0.143 0.572 0.555-0.588 OR 2.12 1.69-2.64 2.12 1.69-2.64 1.99 1.69-2.33 1.99 1.69-2.33 1.77 1.6-1.97 1.77 1.6-1.97 1.61 1.49-1.74 1.61 1.49-1.74 1.55 1.47-1.64 1.55 1.47-1.64 1.24 1.15-1.34 4.63e-08 1.62 1.51-1.75 8.53e-37 2.01 1.87-2.16 2.68e-77 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003106/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.143156480613409 binary_exposure exprsweb-t2d-metaanalysis-diagram-dbslmm-mgi-freeze3-20211120 exprsweb-t2d-metaanalysis-diagram-dbslmm-mgi-freeze3-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_MGI-Freeze3_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 995 0.13 2.23005e-07 0.145 0.541 0.523-0.557 OR 1.04 0.813-1.34 1.04 0.813-1.34 1.12 0.938-1.33 1.12 0.938-1.33 1.05 0.94-1.18 1.05 0.94-1.18 0.99 0.91-1.08 0.99 0.91-1.08 0.979 0.924-1.04 0.979 0.924-1.04 1.01 0.94-1.08 0.809 1.02 0.947-1.09 0.666 0.988 0.921-1.06 0.736 FALSE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003107/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.145240491070891 binary_exposure exprsweb-t2d-metaanalysis-diagram-prscs-mgi-freeze3-20211120 exprsweb-t2d-metaanalysis-diagram-prscs-mgi-freeze3-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_MGI-Freeze3_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 1118480 2e-115 0.029605 0.141 0.61 0.594-0.625 OR 3.28 2.63-4.07 3.28 2.63-4.07 2.74 2.34-3.21 2.74 2.34-3.21 2.23 2-2.47 2.23 2-2.47 2.17 2.01-2.35 2.17 2.01-2.35 2 1.89-2.12 2 1.89-2.12 1.45 1.33-1.57 5.17e-19 1.83 1.69-1.98 3.24e-50 2.89 2.67-3.13 1.13e-156 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003108/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.140784867720387 binary_exposure exprsweb-t2d-metaanalysis-diagram-lassosum-mgi-freeze3-20211120 exprsweb-t2d-metaanalysis-diagram-lassosum-mgi-freeze3-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_MGI-Freeze3_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 374510 1e-107 0.0274874 0.141 0.611 0.595-0.626 OR 2.92 2.35-3.63 2.92 2.35-3.63 2.74 2.34-3.22 2.74 2.34-3.22 2.19 1.97-2.43 2.19 1.97-2.43 2.1 1.94-2.27 2.1 1.94-2.27 1.88 1.78-1.99 1.88 1.78-1.99 1.56 1.44-1.7 3.31e-27 1.96 1.81-2.13 2.17e-62 2.87 2.65-3.1 1.59e-151 TRUE FALSE FALSE TRUE Both 4884 16472 GRCh37/hg19 s=0.9;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003104/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.141094803642748 binary_exposure exprsweb-t2d-metaanalysis-diagram-pt-ukb-20211120 exprsweb-t2d-metaanalysis-diagram-pt-ukb-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_UKB_20211120 PT ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_UKB_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary UKB UK Biobank C+T (DS) Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 193 3.1e-280 0.0202699 0.0449 0.603 0.597-0.609 OR 2.51 2.27-2.77 2.51 2.27-2.77 2.43 2.26-2.61 2.43 2.26-2.61 2.23 2.12-2.34 2.23 2.12-2.34 2.07 1.99-2.15 2.07 1.99-2.15 1.88 1.83-1.94 1.88 1.83-1.94 1.41 1.35-1.48 5.2e-44 1.8 1.72-1.89 6.68e-135 2.64 2.53-2.76 1e-409 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003120/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.0448694453279227 binary_exposure exprsweb-t2d-metaanalysis-diagram-plink-ukb-20211120 exprsweb-t2d-metaanalysis-diagram-plink-ukb-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_UKB_20211120 PLINK ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_UKB_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary UKB UK Biobank C+T (GT) Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 193 3.1e-280 0.0202699 0.0449 0.603 0.597-0.609 OR 2.51 2.27-2.77 2.51 2.27-2.77 2.43 2.26-2.61 2.43 2.26-2.61 2.23 2.12-2.34 2.23 2.12-2.34 2.07 1.99-2.15 2.07 1.99-2.15 1.88 1.83-1.94 1.88 1.83-1.94 1.41 1.35-1.48 5.2e-44 1.8 1.72-1.89 6.68e-135 2.64 2.53-2.76 1e-409 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 5.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003121/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.0448694453279227 binary_exposure exprsweb-t2d-metaanalysis-diagram-dbslmm-ukb-20211120 exprsweb-t2d-metaanalysis-diagram-dbslmm-ukb-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_UKB_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary UKB UK Biobank DBSLMM Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 264 0.41 4.66605e-06 0.0452 0.547 0.541-0.552 OR 1.1 0.958-1.27 1.1 0.958-1.27 1.05 0.945-1.16 1.05 0.945-1.16 1.01 0.95-1.08 1.01 0.95-1.08 1.02 0.971-1.07 1.02 0.971-1.07 1.02 0.99-1.06 1.02 0.99-1.06 0.971 0.932-1.01 0.158 0.989 0.95-1.03 0.61 1.01 0.971-1.05 0.597 FALSE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003122/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0452436865996271 binary_exposure exprsweb-t2d-metaanalysis-diagram-prscs-ukb-20211120 exprsweb-t2d-metaanalysis-diagram-prscs-ukb-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_UKB_20211120 PRSCS ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_UKB_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary UKB UK Biobank PRS-CS Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 1119522 1e-552 0.0402726 0.0444 0.648 0.642-0.654 OR 3.81 3.49-4.16 3.81 3.49-4.16 3.45 3.23-3.69 3.45 3.23-3.69 3.01 2.87-3.15 3.01 2.87-3.15 2.75 2.65-2.85 2.75 2.65-2.85 2.48 2.4-2.55 2.48 2.4-2.55 1.59 1.51-1.67 6.35e-65 2.2 2.09-2.32 5.3e-206 3.95 3.77-4.14 1e-708 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003123/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0444374619936638 binary_exposure exprsweb-t2d-metaanalysis-diagram-lassosum-ukb-20211120 exprsweb-t2d-metaanalysis-diagram-lassosum-ukb-20211120 ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_UKB_20211120 METAANALYSIS-DIAGRAM T2D Binary Binary UKB UK Biobank lassosum Large GWAS 28566273 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/ScottRA_28566273_GCST004773/METAANALYSIS_DIAGRAM_SE1.txt 407553 6.2e-497 0.0348633 0.0445 0.639 0.634-0.645 OR 3.69 3.38-4.04 3.69 3.38-4.04 3.28 3.07-3.51 3.28 3.07-3.51 2.86 2.73-2.99 2.86 2.73-2.99 2.59 2.49-2.68 2.59 2.49-2.68 2.32 2.26-2.39 2.32 2.26-2.39 1.53 1.46-1.62 5.18e-58 2.14 2.04-2.25 1.82e-200 3.6 3.43-3.77 1e-635 TRUE FALSE FALSE TRUE Both 9797 193400 GRCh37/hg19 s=0.9;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003119/ScoringFiles/ phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_T2D_METAANALYSIS-DIAGRAM_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0445166587976877 binary_exposure exprsweb-thinness-stilts-ukhls-pt-mgi-freeze3-20211120 exprsweb-thinness-stilts-ukhls-pt-mgi-freeze3-20211120 ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI-Freeze3_20211120 PT ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI-Freeze3_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 256 0.044 0.00116169 0.0178 0.532 0.503-0.561 OR 0.591 0.233-1.5 0.591 0.233-1.5 0.897 0.521-1.55 0.897 0.521-1.55 0.847 0.591-1.21 0.847 0.591-1.21 1.08 0.855-1.37 1.08 0.855-1.37 1.09 0.927-1.29 1.09 0.927-1.29 0.904 0.738-1.11 0.329 0.884 0.72-1.08 0.235 1.01 0.83-1.24 0.899 TRUE FALSE FALSE TRUE Both 390 20956 GRCh37/hg19 1.58e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003125/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0177902197735153 binary_exposure exprsweb-thinness-stilts-ukhls-plink-mgi-freeze3-20211120 exprsweb-thinness-stilts-ukhls-plink-mgi-freeze3-20211120 ExPRSweb_Thinness_STILTS-UKHLS_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Thinness_STILTS-UKHLS_PLINK_MGI-Freeze3_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 351 0.16 0.000768069 0.0178 0.516 0.49-0.541 OR 1.52 0.842-2.76 1.52 0.842-2.76 1.1 0.671-1.8 1.1 0.671-1.8 1.01 0.725-1.41 1.01 0.725-1.41 0.944 0.737-1.21 0.944 0.737-1.21 0.969 0.818-1.15 0.969 0.818-1.15 1.09 0.893-1.34 0.389 1.06 0.867-1.31 0.552 0.999 0.811-1.23 0.991 FALSE FALSE FALSE TRUE Both 390 20956 GRCh37/hg19 3.16e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003126/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0177913121486746 binary_exposure exprsweb-thinness-stilts-ukhls-dbslmm-mgi-freeze3-20211120 exprsweb-thinness-stilts-ukhls-dbslmm-mgi-freeze3-20211120 ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_MGI-Freeze3_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 344981 0.5 0.000144491 0.0178 0.462 0.453-0.471 OR 0.561 0.221-1.42 0.561 0.221-1.42 1.08 0.658-1.77 1.08 0.658-1.77 1.22 0.895-1.65 1.22 0.895-1.65 1.16 0.923-1.46 1.16 0.923-1.46 1.02 0.862-1.2 1.02 0.862-1.2 0.997 0.817-1.22 0.973 0.892 0.726-1.1 0.281 0.964 0.787-1.18 0.721 FALSE TRUE FALSE TRUE Both 390 20956 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003127/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0177942957615657 binary_exposure exprsweb-thinness-stilts-ukhls-prscs-mgi-freeze3-20211120 exprsweb-thinness-stilts-ukhls-prscs-mgi-freeze3-20211120 ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_MGI-Freeze3_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 1116425 0.33 0.000128855 0.0178 0.514 0.49-0.542 OR 1.73 0.826-3.62 1.73 0.826-3.62 1.31 0.727-2.35 1.31 0.727-2.35 1.13 0.776-1.65 1.13 0.776-1.65 1.04 0.791-1.37 1.04 0.791-1.37 1.16 0.975-1.39 1.16 0.975-1.39 1.12 0.91-1.38 0.284 1.15 0.931-1.43 0.192 1.22 0.97-1.54 0.089 FALSE FALSE FALSE TRUE Both 390 20956 GRCh37/hg19 auto_traitBMI_prefixSTILTS_UKHLS https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003128/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.017793647603998 binary_exposure exprsweb-thinness-stilts-ukhls-lassosum-mgi-freeze3-20211120 exprsweb-thinness-stilts-ukhls-lassosum-mgi-freeze3-20211120 ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_MGI-Freeze3_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 224595 0.079 0.00193052 0.0178 0.525 0.493-0.556 OR 1.1 0.529-2.28 1.1 0.529-2.28 1.4 0.886-2.22 1.4 0.886-2.22 1.72 1.3-2.28 1.72 1.3-2.28 1.42 1.14-1.77 1.42 1.14-1.77 1.19 1.01-1.4 1.19 1.01-1.4 1.16 0.938-1.43 0.172 1.23 0.997-1.52 0.0538 1.29 1.04-1.59 0.0208 FALSE FALSE FALSE TRUE Both 390 20956 GRCh37/hg19 s=1;Lambda=0.02336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003124/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0177896254234039 binary_exposure exprsweb-thinness-stilts-ukhls-pt-ukb-20211120 exprsweb-thinness-stilts-ukhls-pt-ukb-20211120 ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120 PT ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary UKB UK Biobank C+T (DS) Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 4280 3.4e-05 0.00111313 0.00871 0.527 0.513-0.542 OR 1.33 1-1.78 1.33 1-1.78 1.27 1.03-1.57 1.27 1.03-1.57 1.2 1.04-1.38 1.2 1.04-1.38 1.17 1.05-1.29 1.17 1.05-1.29 1.18 1.1-1.27 1.18 1.1-1.27 1.12 1.01-1.23 0.0286 1.18 1.07-1.3 0.0012 1.29 1.17-1.42 2.99e-07 TRUE FALSE FALSE TRUE Both 1761 197933 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003130/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.00871368325160718 binary_exposure exprsweb-thinness-stilts-ukhls-plink-ukb-20211120 exprsweb-thinness-stilts-ukhls-plink-ukb-20211120 ExPRSweb_Thinness_STILTS-UKHLS_PLINK_UKB_20211120 PLINK ExPRSweb_Thinness_STILTS-UKHLS_PLINK_UKB_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary UKB UK Biobank C+T (GT) Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 5164 2.5e-05 0.00132447 0.00871 0.521 0.508-0.535 OR 1.89 1.48-2.42 1.89 1.48-2.42 1.58 1.3-1.92 1.58 1.3-1.92 1.28 1.12-1.47 1.28 1.12-1.47 1.17 1.06-1.3 1.17 1.06-1.3 1.14 1.06-1.23 1.14 1.06-1.23 1.15 1.04-1.27 0.00684 1.14 1.03-1.27 0.011 1.25 1.12-1.39 3.89e-05 TRUE FALSE FALSE TRUE Both 1761 197933 GRCh37/hg19 3.16e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003131/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.00871290760606074 binary_exposure exprsweb-thinness-stilts-ukhls-dbslmm-ukb-20211120 exprsweb-thinness-stilts-ukhls-dbslmm-ukb-20211120 ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_UKB_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary UKB UK Biobank DBSLMM Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 41698 0.083 5.10111e-06 0.00871 0.49 0.476-0.505 OR 0.965 0.689-1.35 0.965 0.689-1.35 0.946 0.742-1.2 0.946 0.742-1.2 1.07 0.927-1.24 1.07 0.927-1.24 1 0.899-1.12 1 0.899-1.12 1.03 0.959-1.12 1.03 0.959-1.12 0.951 0.866-1.04 0.285 0.895 0.815-0.984 0.0215 0.981 0.894-1.08 0.676 FALSE TRUE FALSE TRUE Both 1761 197933 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003132/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0087146580183318 binary_exposure exprsweb-thinness-stilts-ukhls-prscs-ukb-20211120 exprsweb-thinness-stilts-ukhls-prscs-ukb-20211120 ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_UKB_20211120 PRSCS ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_UKB_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary UKB UK Biobank PRS-CS Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 1117469 8.1e-10 0.00159713 0.00871 0.537 0.523-0.55 OR 1.47 1.11-1.93 1.47 1.11-1.93 1.45 1.19-1.77 1.45 1.19-1.77 1.2 1.05-1.38 1.2 1.05-1.38 1.3 1.18-1.44 1.3 1.18-1.44 1.19 1.1-1.28 1.19 1.1-1.28 1.15 1.04-1.28 0.00543 1.31 1.18-1.44 1.57e-07 1.4 1.27-1.55 8.96e-11 TRUE FALSE FALSE TRUE Both 1761 197933 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003133/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0087123662237592 binary_exposure exprsweb-thinness-stilts-ukhls-lassosum-ukb-20211120 exprsweb-thinness-stilts-ukhls-lassosum-ukb-20211120 ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_UKB_20211120 STILTS-UKHLS Body mass index (<=18, thin low BMI; 19~30, control, normal BMI) Binary UKB UK Biobank lassosum Large GWAS 30677029 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/Riveros-McKayF_30677029_GCST007242 281336 5.6e-07 0.00280036 0.00871 0.53 0.517-0.543 OR 1.72 1.34-2.22 1.72 1.34-2.22 1.43 1.17-1.74 1.43 1.17-1.74 1.27 1.1-1.45 1.27 1.1-1.45 1.3 1.18-1.44 1.3 1.18-1.44 1.25 1.16-1.35 1.25 1.16-1.35 1.16 1.05-1.28 0.00339 1.28 1.16-1.41 1.48e-06 1.43 1.3-1.58 9.45e-13 TRUE FALSE FALSE TRUE Both 1761 197933 GRCh37/hg19 s=1;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003129/ScoringFiles/ phewas/ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Thinness_STILTS-UKHLS_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.00871296922639338 binary_exposure exprsweb-smoker-yes-smokinginitiation-pt-mgi-freeze3-20211120 exprsweb-smoker-yes-smokinginitiation-pt-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_PT_MGI-Freeze3_20211120 PT ExPRSweb_Smoker-Yes_SmokingInitiation_PT_MGI-Freeze3_20211120 SmokingInitiation SmokingInitiation Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 8148 7.1e-125 0.0350219 0.234 0.59 0.582-0.597 OR 2.72 2.22-3.33 2.72 2.22-3.33 2.51 2.18-2.89 2.51 2.18-2.89 2.11 1.93-2.3 2.11 1.93-2.3 1.87 1.76-2 1.87 1.76-2 1.72 1.65-1.8 1.72 1.65-1.8 1.34 1.27-1.42 5.43e-24 1.71 1.62-1.81 7.52e-80 2.32 2.19-2.45 4.04e-199 TRUE FALSE FALSE TRUE Both 11544 11788 GRCh37/hg19 3.16e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003060/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.234152527791055 binary_exposure exprsweb-smoker-yes-smokinginitiation-plink-mgi-freeze3-20211120 exprsweb-smoker-yes-smokinginitiation-plink-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_MGI-Freeze3_20211120 SmokingInitiation SmokingInitiation Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 15848 2.6e-88 0.0266318 0.236 0.576 0.568-0.583 OR 2.02 1.66-2.45 2.02 1.66-2.45 2.17 1.89-2.5 2.17 1.89-2.5 1.97 1.8-2.15 1.97 1.8-2.15 1.75 1.64-1.86 1.75 1.64-1.86 1.64 1.57-1.71 1.64 1.57-1.71 1.29 1.22-1.37 2.08e-19 1.58 1.5-1.67 1.79e-59 2.06 1.95-2.17 2.26e-150 TRUE FALSE FALSE TRUE Both 11544 11788 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003061/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.236007808661675 binary_exposure exprsweb-smoker-yes-smokinginitiation-dbslmm-mgi-freeze3-20211120 exprsweb-smoker-yes-smokinginitiation-dbslmm-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_MGI-Freeze3_20211120 SmokingInitiation SmokingInitiation Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 355 0.53 2.8836e-07 0.24 0.496 0.489-0.504 OR 0.872 0.723-1.05 0.872 0.723-1.05 1.01 0.886-1.15 1.01 0.886-1.15 1.05 0.96-1.14 1.05 0.96-1.14 1.01 0.952-1.08 1.01 0.952-1.08 0.987 0.946-1.03 0.987 0.946-1.03 1.02 0.967-1.07 0.492 1.02 0.971-1.08 0.381 1 0.95-1.06 0.954 FALSE TRUE FALSE TRUE Both 11544 11788 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003062/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.240234455696072 binary_exposure exprsweb-smoker-yes-smokinginitiation-prscs-mgi-freeze3-20211120 exprsweb-smoker-yes-smokinginitiation-prscs-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_MGI-Freeze3_20211120 SmokingInitiation SmokingInitiation Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 1109786 1.1e-170 0.0439707 0.232 0.605 0.598-0.612 OR 3.13 2.54-3.87 3.13 2.54-3.87 2.58 2.23-2.98 2.58 2.23-2.98 2.28 2.08-2.49 2.28 2.08-2.49 2.12 1.99-2.26 2.12 1.99-2.26 1.92 1.84-2.01 1.92 1.84-2.01 1.46 1.38-1.55 4.44e-37 1.89 1.79-2 1.45e-105 2.69 2.55-2.85 2.71e-258 TRUE FALSE FALSE TRUE Both 11544 11788 GRCh37/hg19 auto_traitSMOKING_prefixSmokingInitiation https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003063/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.231823069284051 binary_exposure exprsweb-smoker-yes-smokinginitiation-lassosum-mgi-freeze3-20211120 exprsweb-smoker-yes-smokinginitiation-lassosum-mgi-freeze3-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_MGI-Freeze3_20211120 SmokingInitiation SmokingInitiation Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 641463 1.6e-167 0.0448342 0.232 0.604 0.597-0.611 OR 3.15 2.55-3.9 3.15 2.55-3.9 2.85 2.47-3.3 2.85 2.47-3.3 2.49 2.27-2.73 2.49 2.27-2.73 2.19 2.05-2.34 2.19 2.05-2.34 1.9 1.82-1.99 1.9 1.82-1.99 1.48 1.4-1.57 3.45e-40 1.85 1.74-1.96 5.49e-98 2.72 2.57-2.87 2.04e-266 TRUE FALSE FALSE TRUE Both 11544 11788 GRCh37/hg19 s=0.9;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003059/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.231965283585456 binary_exposure exprsweb-smoker-yes-smokinginitiation-pt-ukb-20211120 exprsweb-smoker-yes-smokinginitiation-pt-ukb-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_PT_UKB_20211120 PT ExPRSweb_Smoker-Yes_SmokingInitiation_PT_UKB_20211120 SmokingInitiation SmokingInitiation Binary UKB UK Biobank C+T (DS) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 17138 1.9e-3208 0.0997303 0.216 0.665 0.663-0.667 OR 7.12 6.4-7.91 7.12 6.4-7.91 6.39 5.95-6.87 6.39 5.95-6.87 4.84 4.64-5.04 4.84 4.64-5.04 4 3.89-4.11 4 3.89-4.11 3.09 3.04-3.14 3.09 3.04-3.14 1.55 1.52-1.59 1e-372 2.29 2.25-2.34 1e-1410 4.47 4.39-4.56 1e-4890 TRUE FALSE FALSE TRUE Both 123032 80396 GRCh37/hg19 1.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003065/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.216131684565248 binary_exposure exprsweb-smoker-yes-smokinginitiation-plink-ukb-20211120 exprsweb-smoker-yes-smokinginitiation-plink-ukb-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_UKB_20211120 PLINK ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_UKB_20211120 SmokingInitiation SmokingInitiation Binary UKB UK Biobank C+T (GT) Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 39469 2.3e-6988 0.225246 0.189 0.767 0.765-0.769 OR 62.4 47.4-82.1 62.4 47.4-82.1 39.6 33.8-46.2 39.6 33.8-46.2 23.2 21.5-25 23.2 21.5-25 15.1 14.4-15.7 15.1 14.4-15.7 8 7.84-8.17 8 7.84-8.17 1.64 1.6-1.68 1e-358 2.9 2.84-2.97 1e-1790 10.3 10-10.5 1e-9110 TRUE FALSE FALSE TRUE Both 123032 80396 GRCh37/hg19 5.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003066/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.189135193748071 binary_exposure exprsweb-smoker-yes-smokinginitiation-dbslmm-ukb-20211120 exprsweb-smoker-yes-smokinginitiation-dbslmm-ukb-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_UKB_20211120 SmokingInitiation SmokingInitiation Binary UKB UK Biobank DBSLMM Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 244 0.11 3.34167e-06 0.235 0.505 0.502-0.507 OR 1.01 0.952-1.08 1.01 0.952-1.08 1.04 0.989-1.08 1.04 0.989-1.08 1.02 0.991-1.05 1.02 0.991-1.05 1.01 0.99-1.03 1.01 0.99-1.03 1 0.988-1.02 1 0.988-1.02 1 0.982-1.02 0.981 1.02 1-1.04 0.0549 1.01 0.99-1.03 0.384 FALSE FALSE FALSE TRUE Both 123032 80396 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003067/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.234562645458209 binary_exposure exprsweb-smoker-yes-smokinginitiation-prscs-ukb-20211120 exprsweb-smoker-yes-smokinginitiation-prscs-ukb-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_UKB_20211120 PRSCS ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_UKB_20211120 SmokingInitiation SmokingInitiation Binary UKB UK Biobank PRS-CS Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 1110662 3.4e-2174 0.0653795 0.222 0.633 0.63-0.635 OR 4.55 4.15-4.98 4.55 4.15-4.98 3.96 3.72-4.21 3.96 3.72-4.21 3.34 3.22-3.47 3.34 3.22-3.47 2.88 2.8-2.95 2.88 2.8-2.95 2.42 2.38-2.46 2.42 2.38-2.46 1.46 1.43-1.49 6.46e-302 1.98 1.94-2.02 1e-1020 3.35 3.29-3.41 1e-3390 TRUE FALSE FALSE TRUE Both 123032 80396 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003068/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.222399788759951 binary_exposure exprsweb-smoker-yes-smokinginitiation-lassosum-ukb-20211120 exprsweb-smoker-yes-smokinginitiation-lassosum-ukb-20211120 ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_UKB_20211120 SmokingInitiation SmokingInitiation Binary UKB UK Biobank lassosum Large GWAS 30643251 https://conservancy.umn.edu/bitstream/handle/11299/201564/SmokingInitiation.txt.gz?sequence=34&isAllowed=y 642068 8.1e-4376 0.135332 0.209 0.698 0.696-0.7 OR 13 11.4-14.9 13 11.4-14.9 10.1 9.23-11 10.1 9.23-11 7.11 6.78-7.45 7.11 6.78-7.45 5.57 5.41-5.75 5.57 5.41-5.75 4.02 3.95-4.09 4.02 3.95-4.09 1.63 1.59-1.66 1e-418 2.52 2.47-2.57 1e-1620 5.9 5.78-6.02 1e-6390 TRUE FALSE FALSE TRUE Both 123032 80396 GRCh37/hg19 s=0.2;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003064/ScoringFiles/ phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Smoker-Yes_SmokingInitiation_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.208572563137905 binary_exposure exprsweb-vitamin-b12-wood-et-al-2013-1000g-pt-mgi-freeze3-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-pt-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_MGI-Freeze3_20211120 PT ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_MGI-Freeze3_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 9 0.0011 0.000985119656705681 Beta 0.122 -0.08968-0.33368 0.122 -0.08968-0.33368 0.0255 -0.125028-0.176028 0.0255 -0.125028-0.176028 0.0262 -0.070624-0.123024 0.0262 -0.070624-0.123024 0.0637 -0.006664-0.134064 0.0637 -0.006664-0.134064 0.0776 0.028796-0.126404 0.0776 0.028796-0.126404 0.0522 -0.00758-0.11198 0.0874 0.0955 0.035916-0.155084 0.00167 0.129 0.069612-0.188388 2.08e-05 TRUE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 2.51e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003165/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64200.4904310679 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-plink-mgi-freeze3-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-plink-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_MGI-Freeze3_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 9 0.0011 0.000985119656705681 Beta 0.122 -0.08968-0.33368 0.122 -0.08968-0.33368 0.0255 -0.125028-0.176028 0.0255 -0.125028-0.176028 0.0262 -0.070624-0.123024 0.0262 -0.070624-0.123024 0.0637 -0.006664-0.134064 0.0637 -0.006664-0.134064 0.0776 0.028796-0.126404 0.0776 0.028796-0.126404 0.0522 -0.00758-0.11198 0.0874 0.0955 0.035916-0.155084 0.00167 0.129 0.069612-0.188388 2.08e-05 TRUE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 2.51e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003166/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64200.4904310679 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-dbslmm-mgi-freeze3-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-dbslmm-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_MGI-Freeze3_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 9805 0.29 0.000146429353630915 Beta -0.0372 -0.24888-0.17448 -0.0372 -0.24888-0.17448 -0.0773 -0.227828-0.073228 -0.0773 -0.227828-0.073228 -0.0352 -0.132024-0.061624 -0.0352 -0.132024-0.061624 -0.0399 -0.110264-0.030464 -0.0399 -0.110264-0.030464 -0.0298 -0.078604-0.019004 -0.0298 -0.078604-0.019004 0.00434 -0.055636-0.064316 0.887 -0.0192 -0.079764-0.041364 0.535 -0.0299 -0.089092-0.029292 0.323 FALSE TRUE FALSE TRUE Both 4313 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003167/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64342.798153312 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-prscs-mgi-freeze3-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-prscs-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_MGI-Freeze3_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 1100788 0.11 4.03158700265193e-05 Beta 0.0759 -0.13578-0.28758 0.0759 -0.13578-0.28758 0.0456 -0.105124-0.196324 0.0456 -0.105124-0.196324 0.0303 -0.066524-0.127124 0.0303 -0.066524-0.127124 0.0535 -0.016864-0.123864 0.0535 -0.016864-0.123864 0.038 -0.010804-0.086804 0.038 -0.010804-0.086804 -0.00497 -0.064554-0.054614 0.87 0.0073 -0.05248-0.06708 0.811 0.0379 -0.021684-0.097484 0.213 FALSE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003168/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64321.8294651107 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-lassosum-mgi-freeze3-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-lassosum-mgi-freeze3-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_MGI-Freeze3_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 263612 0.002 0.00283214197433016 Beta 0.338 0.12632-0.54968 0.338 0.12632-0.54968 0.246 0.095668-0.396332 0.246 0.095668-0.396332 0.127 0.030176-0.223824 0.127 0.030176-0.223824 0.125 0.054636-0.195364 0.125 0.054636-0.195364 0.125 0.076196-0.173804 0.125 0.076196-0.173804 -0.0125 -0.072084-0.047084 0.682 0.0164 -0.04338-0.07618 0.59 0.129 0.069416-0.188584 2.25e-05 TRUE FALSE FALSE TRUE Both 4313 0 GRCh37/hg19 s=1;Lambda=0.1 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003164/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 64216.1980404443 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-pt-ukb-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-pt-ukb-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_UKB_20211120 PT ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_UKB_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml UKB UK Biobank C+T (DS) Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 2232 0.42 6.44531774486989e-05 Beta -0.0238 -0.07084-0.02324 -0.0238 -0.07084-0.02324 -0.00537 -0.038886-0.028146 -0.00537 -0.038886-0.028146 -0.00406 -0.02562-0.0175 -0.00406 -0.02562-0.0175 0.000489 -0.0151322-0.0161102 0.000489 -0.0151322-0.0161102 -0.00218 -0.0129992-0.0086392 -0.00218 -0.0129992-0.0086392 -0.0126 -0.0257712-0.0005712 0.0604 -0.00339 -0.0166592-0.0098792 0.617 -0.00752 -0.0207304-0.0056904 0.264 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 1.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003170/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PT_UKB_20211120/exclusion.tsv 2021-01-10 19.5819600667397 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-plink-ukb-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-plink-ukb-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_UKB_20211120 PLINK ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_UKB_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml UKB UK Biobank C+T (GT) Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 2232 0.42 6.44531774486989e-05 Beta -0.0238 -0.07084-0.02324 -0.0238 -0.07084-0.02324 -0.00537 -0.038886-0.028146 -0.00537 -0.038886-0.028146 -0.00406 -0.02562-0.0175 -0.00406 -0.02562-0.0175 0.000489 -0.0151322-0.0161102 0.000489 -0.0151322-0.0161102 -0.00218 -0.0129992-0.0086392 -0.00218 -0.0129992-0.0086392 -0.0126 -0.0257712-0.0005712 0.0604 -0.00339 -0.0166592-0.0098792 0.617 -0.00752 -0.0207304-0.0056904 0.264 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 1.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003171/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 19.5819600667397 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-dbslmm-ukb-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-dbslmm-ukb-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_UKB_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml UKB UK Biobank DBSLMM Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 5880 0.92 4.13065214580429e-07 Beta 0.0303 -0.01674-0.07734 0.0303 -0.01674-0.07734 0.0296 -0.003916-0.063116 0.0296 -0.003916-0.063116 0.0082 -0.01336-0.02976 0.0082 -0.01336-0.02976 0.0174 0.0017788-0.0330212 0.0174 0.0017788-0.0330212 0.00317 -0.0076492-0.0139892 0.00317 -0.0076492-0.0139892 -0.00649 -0.0197592-0.0067792 0.338 -0.00937 -0.0225608-0.0038208 0.164 -0.00207 -0.015398-0.011258 0.76 FALSE TRUE FALSE TRUE Both 87079 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003172/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 19.582101414299 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-prscs-ukb-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-prscs-ukb-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_UKB_20211120 PRSCS ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_UKB_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml UKB UK Biobank PRS-CS Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 1101425 0.59 7.2072912766011e-07 Beta -0.035 -0.08204-0.01204 -0.035 -0.08204-0.01204 -0.0252 -0.058716-0.008316 -0.0252 -0.058716-0.008316 -0.00452 -0.02608-0.01704 -0.00452 -0.02608-0.01704 0.000406 -0.0152152-0.0160272 0.000406 -0.0152152-0.0160272 0.000372 -0.0104472-0.0111912 0.000372 -0.0104472-0.0111912 0.00711 -0.0061788-0.0203988 0.295 0.00281 -0.010518-0.016138 0.679 0.00361 -0.0095808-0.0168008 0.592 FALSE FALSE FALSE TRUE Both 87079 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003173/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 19.5820391255405 normal_range 200 900 pg/ml exprsweb-vitamin-b12-wood-et-al-2013-1000g-lassosum-ukb-20211120 exprsweb-vitamin-b12-wood-et-al-2013-1000g-lassosum-ukb-20211120 ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_UKB_20211120 Wood-et-al-2013-1000G Vitamin_B12 Quantitative Range unit: pg/ml UKB UK Biobank lassosum Large GWAS 23696881 wget ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/WoodAR_23696881_GCST009169/Wood_et_al_2013_PMID_23696881_1000G_circulating_molecules.txt.gz 291530 0.2 5.44200854370542e-05 Beta 0.000308 -0.046732-0.047348 0.000308 -0.046732-0.047348 -0.0118 -0.045316-0.021716 -0.0118 -0.045316-0.021716 -0.0157 -0.03726-0.00586 -0.0157 -0.03726-0.00586 -0.00436 -0.0199812-0.0112612 -0.00436 -0.0199812-0.0112612 -0.0026 -0.0134192-0.0082192 -0.0026 -0.0134192-0.0082192 -0.00223 -0.0154404-0.0109804 0.741 0.000865 -0.0124238-0.0141538 0.899 -0.00319 -0.0164592-0.0100792 0.637 FALSE FALSE FALSE TRUE Both 87079 0 GRCh37/hg19 s=0.9;Lambda=0.1 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003169/ScoringFiles/ phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Vitamin-B12_Wood-et-al-2013-1000G_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 19.5817279658755 normal_range 200 900 pg/ml exprsweb-egfr-creatine-egfrcrea-overall-ea-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_MGI-Freeze3_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 352 7.7e-48 0.00944029092099027 Beta -0.161 -0.245084--0.076916 -0.161 -0.245084--0.076916 -0.161 -0.22078--0.10122 -0.161 -0.22078--0.10122 -0.143 -0.181416--0.104584 -0.143 -0.181416--0.104584 -0.15 -0.178028--0.121972 -0.15 -0.178028--0.121972 -0.143 -0.162404--0.123596 -0.143 -0.162404--0.123596 -0.0851 -0.109012--0.061188 2.84e-12 -0.15 -0.173716--0.126284 7.34e-35 -0.225 -0.249108--0.200892 3.03e-74 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 3.16e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003255/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0390843302015078 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_MGI-Freeze3_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 641 1.6e-44 0.00860800166550169 Beta -0.239 -0.323084--0.154916 -0.239 -0.323084--0.154916 -0.194 -0.25378--0.13422 -0.194 -0.25378--0.13422 -0.207 -0.245416--0.168584 -0.207 -0.245416--0.168584 -0.169 -0.196832--0.141168 -0.169 -0.196832--0.141168 -0.133 -0.152306--0.113694 -0.133 -0.152306--0.113694 -0.0955 -0.119216--0.071784 2.56e-15 -0.151 -0.174716--0.127284 4.07e-36 -0.216 -0.239912--0.192088 2.95e-70 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 1.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003256/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0391130709008501 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_MGI-Freeze3_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 3145 0.28 0.000100032202600075 Beta 0.0603 -0.023784-0.144384 0.0603 -0.023784-0.144384 0.0128 -0.04698-0.07258 0.0128 -0.04698-0.07258 0.00728 -0.031136-0.045696 0.00728 -0.031136-0.045696 0.00842 -0.019412-0.036252 0.00842 -0.019412-0.036252 -0.0199 -0.0392256--0.0005744 -0.0199 -0.0392256--0.0005744 0.000276 -0.02344-0.023992 0.982 -0.0203 -0.04382-0.00322 0.0891 -0.0265 -0.050412--0.002588 0.0295 FALSE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003257/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0394868714988203 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_MGI-Freeze3_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 16682 8.8e-29 0.0041955672726504 Beta -0.0993 -0.183384--0.015216 -0.0993 -0.183384--0.015216 -0.107 -0.16678--0.04722 -0.107 -0.16678--0.04722 -0.113 -0.151416--0.074584 -0.113 -0.151416--0.074584 -0.11 -0.138028--0.081972 -0.11 -0.138028--0.081972 -0.118 -0.1374236--0.0985764 -0.118 -0.1374236--0.0985764 -0.0681 -0.091816--0.044384 1.99e-08 -0.0985 -0.122412--0.074588 7.1e-16 -0.174 -0.198108--0.149892 3.96e-45 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto_traiteGFR_prefixeGFRcrea_overall_EA. https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003258/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0392505808311952 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_MGI-Freeze3_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 2986 7.9e-63 0.0109423133192778 Beta -0.133 -0.21728--0.04872 -0.133 -0.21728--0.04872 -0.174 -0.233976--0.114024 -0.174 -0.233976--0.114024 -0.171 -0.209612--0.132388 -0.171 -0.209612--0.132388 -0.178 -0.206224--0.149776 -0.178 -0.206224--0.149776 -0.16 -0.179796--0.140204 -0.16 -0.179796--0.140204 -0.102 -0.1265--0.0775 3.21e-16 -0.18 -0.205676--0.154324 8.61e-43 -0.267 -0.293852--0.240148 2.25e-84 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 s=0.5;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003254/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0389542751034236 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-pt-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-pt-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_UKB_20211120 PT ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_UKB_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative UKB UK Biobank C+T (DS) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 314 5.4e-773 0.011838676496497 Beta -0.267 -0.294636--0.239364 -0.267 -0.294636--0.239364 -0.259 -0.2786--0.2394 -0.259 -0.2786--0.2394 -0.231 -0.2436028--0.2183972 -0.231 -0.2436028--0.2183972 -0.213 -0.2221336--0.2038664 -0.213 -0.2221336--0.2038664 -0.183 -0.1893308--0.1766692 -0.183 -0.1893308--0.1766692 -0.109 -0.1170164--0.1009836 4.51e-157 -0.187 -0.1944676--0.1795324 1e-523 -0.282 -0.2898988--0.2741012 1e-1070 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003270/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PT_UKB_20211120/exclusion.tsv 2021-01-10 225.669632837776 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-plink-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-plink-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_UKB_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative UKB UK Biobank C+T (GT) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 600 1.2e-786 0.0118952177143095 Beta -0.298 -0.325636--0.270364 -0.298 -0.325636--0.270364 -0.263 -0.2826--0.2434 -0.263 -0.2826--0.2434 -0.234 -0.2466028--0.2213972 -0.234 -0.2466028--0.2213972 -0.217 -0.2261336--0.2078664 -0.217 -0.2261336--0.2078664 -0.195 -0.2013112--0.1886888 -0.195 -0.2013112--0.1886888 -0.112 -0.1196832--0.1043168 4.24e-179 -0.184 -0.1921928--0.1758072 1e-421 -0.294 -0.3019184--0.2860816 1e-1150 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 6.31e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003271/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 225.598206924397 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-dbslmm-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-dbslmm-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_UKB_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative UKB UK Biobank DBSLMM Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 2305 7e-15 0.000231584312051757 Beta -0.0598 -0.087436--0.032164 -0.0598 -0.087436--0.032164 -0.0404 -0.06--0.0208 -0.0404 -0.06--0.0208 -0.0406 -0.0532224--0.0279776 -0.0406 -0.0532224--0.0279776 -0.0315 -0.0406728--0.0223272 -0.0315 -0.0406728--0.0223272 -0.0292 -0.0355504--0.0228496 -0.0292 -0.0355504--0.0228496 -0.011 -0.0191536--0.0028464 0.00838 -0.021 -0.0288988--0.0131012 1.91e-07 -0.0399 -0.0475636--0.0322364 2.1e-24 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003272/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 229.7039461338 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-prscs-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-prscs-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_UKB_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative UKB UK Biobank PRS-CS Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 16686 3.1e-421 0.006077640810589 Beta -0.209 -0.236636--0.181364 -0.209 -0.236636--0.181364 -0.204 -0.2236--0.1844 -0.204 -0.2236--0.1844 -0.178 -0.1906028--0.1653972 -0.178 -0.1906028--0.1653972 -0.16 -0.1691532--0.1508468 -0.16 -0.1691532--0.1508468 -0.139 -0.1453308--0.1326692 -0.139 -0.1453308--0.1326692 -0.0823 -0.0901988--0.0744012 8.28e-93 -0.129 -0.1370752--0.1209248 1.6e-215 -0.21 -0.2178792--0.2021208 1e-593 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003273/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 227.525255127912 normal_range exprsweb-egfr-creatine-egfrcrea-overall-ea-lassosum-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-ea-lassosum-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_UKB_20211120 eGFRcrea-overall-EA eGFRcrea Quantitative UKB UK Biobank lassosum Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcrea_overall_EA.csv.gz 2989 1.3e-892 0.0132483516356327 Beta -0.319 -0.346636--0.291364 -0.319 -0.346636--0.291364 -0.296 -0.3156--0.2764 -0.296 -0.3156--0.2764 -0.257 -0.2695832--0.2444168 -0.257 -0.2695832--0.2444168 -0.228 -0.2371336--0.2188664 -0.228 -0.2371336--0.2188664 -0.204 -0.2103112--0.1976888 -0.204 -0.2103112--0.1976888 -0.114 -0.12184--0.10616 5.07e-179 -0.188 -0.1958792--0.1801208 1e-477 -0.305 -0.3127224--0.2972776 1e-1300 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 s=0.5;Lambda=0.00695 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003269/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-EA_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 225.045350509855 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-pt-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_MGI-Freeze3_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 234 1.2e-65 0.0106373325061563 Beta -0.243 -0.327084--0.158916 -0.243 -0.327084--0.158916 -0.207 -0.26678--0.14722 -0.207 -0.26678--0.14722 -0.202 -0.240416--0.163584 -0.202 -0.240416--0.163584 -0.178 -0.205832--0.150168 -0.178 -0.205832--0.150168 -0.162 -0.1813452--0.1426548 -0.162 -0.1813452--0.1426548 -0.109 -0.132716--0.085284 1.73e-19 -0.177 -0.200716--0.153284 1.22e-48 -0.259 -0.282912--0.235088 1.27e-100 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 3.16e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003260/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.038929886217482 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-plink-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_MGI-Freeze3_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 234 1.2e-65 0.0106373325061563 Beta -0.243 -0.327084--0.158916 -0.243 -0.327084--0.158916 -0.207 -0.26678--0.14722 -0.207 -0.26678--0.14722 -0.202 -0.240416--0.163584 -0.202 -0.240416--0.163584 -0.178 -0.205832--0.150168 -0.178 -0.205832--0.150168 -0.162 -0.1813452--0.1426548 -0.162 -0.1813452--0.1426548 -0.109 -0.132716--0.085284 1.73e-19 -0.177 -0.200716--0.153284 1.22e-48 -0.259 -0.282912--0.235088 1.27e-100 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 3.16e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003261/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.038929886217482 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 1005540 7.8e-64 0.0114829716318621 Beta -0.295 -0.379084--0.210916 -0.295 -0.379084--0.210916 -0.229 -0.288976--0.169024 -0.229 -0.288976--0.169024 -0.172 -0.210612--0.133388 -0.172 -0.210612--0.133388 -0.173 -0.201028--0.144972 -0.173 -0.201028--0.144972 -0.158 -0.1775412--0.1384588 -0.158 -0.1775412--0.1384588 -0.107 -0.130912--0.083088 1.27e-18 -0.169 -0.193108--0.144892 3.16e-43 -0.252 -0.276892--0.227108 8.98e-88 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003262/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0389455776570333 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-prscs-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 932548 3.3e-109 0.0153673824433036 Beta -0.343 -0.42728--0.25872 -0.343 -0.42728--0.25872 -0.26 -0.319976--0.200024 -0.26 -0.319976--0.200024 -0.263 -0.301612--0.224388 -0.263 -0.301612--0.224388 -0.225 -0.253224--0.196776 -0.225 -0.253224--0.196776 -0.202 -0.221796--0.182204 -0.202 -0.221796--0.182204 -0.14 -0.164304--0.115696 1.42e-29 -0.232 -0.257088--0.206912 9.89e-73 -0.348 -0.374656--0.321344 7.97e-145 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 PRS_auto_traiteGFR_prefixeGFRcrea_overall_IV_2GC https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003263/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.038556807877399 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-lassosum-mgi-freeze3-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 87064 2.8e-106 0.0139817911337035 Beta -0.315 -0.399084--0.230916 -0.315 -0.399084--0.230916 -0.277 -0.336976--0.217024 -0.277 -0.336976--0.217024 -0.249 -0.287612--0.210388 -0.249 -0.287612--0.210388 -0.223 -0.251028--0.194972 -0.223 -0.251028--0.194972 -0.196 -0.2156--0.1764 -0.196 -0.2156--0.1764 -0.129 -0.152912--0.105088 2.82e-26 -0.215 -0.2395--0.1905 3.78e-66 -0.321 -0.34648--0.29552 3.52e-134 TRUE TRUE FALSE TRUE Both 20396 0 GRCh37/hg19 s=0.9;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003259/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.0385817266747559 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-pt-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-pt-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_UKB_20211120 PT ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_UKB_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative UKB UK Biobank C+T (DS) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 458 3e-1042 0.0157009316119376 Beta -0.341 -0.368636--0.313364 -0.341 -0.368636--0.313364 -0.313 -0.3326--0.2934 -0.313 -0.3326--0.2934 -0.271 -0.2835832--0.2584168 -0.271 -0.2835832--0.2584168 -0.242 -0.2511336--0.2328664 -0.242 -0.2511336--0.2328664 -0.216 -0.2223112--0.2096888 -0.216 -0.2223112--0.2096888 -0.127 -0.1348008--0.1191992 5.63e-224 -0.211 -0.21884--0.20316 1e-605 -0.328 -0.3357812--0.3202188 1e-1490 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 1.58e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003275/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PT_UKB_20211120/exclusion.tsv 2021-01-10 224.269417630105 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-plink-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-plink-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_UKB_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative UKB UK Biobank C+T (GT) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 458 3.7e-1049 0.0157058036153007 Beta -0.348 -0.375636--0.320364 -0.348 -0.375636--0.320364 -0.313 -0.3326--0.2934 -0.313 -0.3326--0.2934 -0.272 -0.2845832--0.2594168 -0.272 -0.2845832--0.2594168 -0.241 -0.2501336--0.2318664 -0.241 -0.2501336--0.2318664 -0.217 -0.2233112--0.2106888 -0.217 -0.2233112--0.2106888 -0.126 -0.133644--0.118356 1.11e-228 -0.209 -0.2169576--0.2010424 1e-577 -0.329 -0.3367616--0.3212384 1e-1500 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 2.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003276/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 224.233735857752 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-dbslmm-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-dbslmm-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_UKB_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative UKB UK Biobank DBSLMM Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 963494 1.3e-840 0.0139931309482479 Beta -0.3 -0.327636--0.272364 -0.3 -0.327636--0.272364 -0.266 -0.2856--0.2464 -0.266 -0.2856--0.2464 -0.249 -0.2616028--0.2363972 -0.249 -0.2616028--0.2363972 -0.224 -0.2331532--0.2148468 -0.224 -0.2331532--0.2148468 -0.196 -0.2023308--0.1896692 -0.196 -0.2023308--0.1896692 -0.119 -0.12684--0.11116 4.65e-195 -0.194 -0.20184--0.18616 1e-511 -0.3 -0.3077028--0.2922972 1e-1270 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003277/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 225.316332213626 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-prscs-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-prscs-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_UKB_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative UKB UK Biobank PRS-CS Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 932878 1.5e-1303 0.0208485831596772 Beta -0.358 -0.385636--0.330364 -0.358 -0.385636--0.330364 -0.348 -0.3676--0.3284 -0.348 -0.3676--0.3284 -0.304 -0.3166028--0.2913972 -0.304 -0.3166028--0.2913972 -0.275 -0.2841532--0.2658468 -0.275 -0.2841532--0.2658468 -0.244 -0.2503308--0.2376692 -0.244 -0.2503308--0.2376692 -0.15 -0.157938--0.142062 1.67e-299 -0.237 -0.2450556--0.2289444 1e-722 -0.374 -0.3816832--0.3663168 1e-1980 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003278/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 222.926984385962 normal_range exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-lassosum-ukb-20211120 exprsweb-egfr-creatine-egfrcrea-overall-iv-2gc-lassosum-ukb-20211120 ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_UKB_20211120 eGFRcrea-overall-IV-2GC eGFRcrea Quantitative UKB UK Biobank lassosum Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcrea_overall_IV_2GC_b36_MAFget005_Nget50_20120705_b37.csv.gz 87693 1.6e-1414 0.0219685843097865 Beta -0.393 -0.420636--0.365364 -0.393 -0.420636--0.365364 -0.358 -0.3776--0.3384 -0.358 -0.3776--0.3384 -0.311 -0.3235832--0.2984168 -0.311 -0.3235832--0.2984168 -0.288 -0.2971336--0.2788664 -0.288 -0.2971336--0.2788664 -0.256 -0.2623112--0.2496888 -0.256 -0.2623112--0.2496888 -0.15 -0.1576048--0.1423952 1e-325 -0.242 -0.2502124--0.2337876 1e-726 -0.388 -0.3955852--0.3804148 1e-2180 TRUE TRUE FALSE TRUE Both 195014 0 GRCh37/hg19 s=0.9;Lambda=0.00546 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003274/ScoringFiles/ phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-Creatine_eGFRcrea-overall-IV-2GC_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 222.361675886989 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-pt-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_MGI-Freeze3_20211120 eGFRcys-overall-EA eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 42 0.4 0.042692922714881 Beta -0.886 -1.97968-0.20768 -0.886 -1.97968-0.20768 -0.722 -1.56088-0.11688 -0.722 -1.56088-0.11688 -0.615 -1.17752--0.05248 -0.615 -1.17752--0.05248 -0.424 -0.83952--0.00848 -0.424 -0.83952--0.00848 -0.0498 -0.33988-0.24028 -0.0498 -0.33988-0.24028 0.0114 -0.35708-0.37988 0.952 0.0953 -0.26534-0.45594 0.605 -0.12 -0.50808-0.26808 0.543 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 5.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003295/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213049885273379 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-plink-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_MGI-Freeze3_20211120 eGFRcys-overall-EA eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 87 0.62 0.0551106607265934 Beta -0.458 -1.55756-0.64156 -0.458 -1.55756-0.64156 -0.485 -1.33368-0.36368 -0.485 -1.33368-0.36368 -0.508 -1.09404-0.07804 -0.508 -1.09404-0.07804 -0.245 -0.66052-0.17052 -0.245 -0.66052-0.17052 -0.158 -0.44612-0.13012 -0.158 -0.44612-0.13012 0.0472 -0.35068-0.44508 0.816 0.106 -0.21348-0.42548 0.515 -0.0879 -0.44462-0.26882 0.629 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 5.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003296/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.21408086164576 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_MGI-Freeze3_20211120 eGFRcys-overall-EA eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 7372 0.5 0.00704450361256257 Beta 0.428 -0.64412-1.50012 0.428 -0.64412-1.50012 -0.105 -0.9478-0.7378 -0.105 -0.9478-0.7378 -0.52 -1.09232-0.05232 -0.52 -1.09232-0.05232 -0.233 -0.64852-0.18252 -0.233 -0.64852-0.18252 -0.144 -0.43408-0.14608 -0.144 -0.43408-0.14608 0.0688 -0.28988-0.42748 0.707 -0.046 -0.4086-0.3166 0.804 -0.201 -0.56948-0.16748 0.285 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003297/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213594158623656 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-prscs-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_MGI-Freeze3_20211120 eGFRcys-overall-EA eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 16681 0.35 0.000120098165562832 Beta 0.646 -0.4614-1.7534 0.646 -0.4614-1.7534 0.561 -0.28964-1.41164 0.561 -0.28964-1.41164 -0.0839 -0.65622-0.48842 -0.0839 -0.65622-0.48842 0.102 -0.31548-0.51948 0.102 -0.31548-0.51948 -0.0253 -0.3193-0.2687 -0.0253 -0.3193-0.2687 0.0481 -0.30078-0.39698 0.787 0.169 -0.18576-0.52376 0.35 0.0444 -0.30644-0.39524 0.805 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 PRS_auto_traiteGFR_prefixeGFRcys=_overall_EA https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003298/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.212712873818165 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-lassosum-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_MGI-Freeze3_20211120 eGFRcys-overall-EA eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 1954 0.81 0.0496964890225227 Beta -0.706 -1.77616-0.36416 -0.706 -1.77616-0.36416 -0.697 -1.53-0.136 -0.697 -1.53-0.136 -0.579 -1.14936--0.00864 -0.579 -1.14936--0.00864 -0.212 -0.63144-0.20744 -0.212 -0.63144-0.20744 -0.322 -0.61012--0.03388 -0.322 -0.61012--0.03388 -0.198 -0.61156-0.21556 0.348 -0.0248 -0.4364-0.3868 0.906 -0.435 -0.82308--0.04692 0.0284 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 s=0.9;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003294/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214490947964218 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-pt-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-pt-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_UKB_20211120 PT ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_UKB_20211120 eGFRcys-overall-EA eGFRcys Quantitative UKB UK Biobank C+T (DS) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 6 2.9e-1506 0.0275150676694114 Beta -0.539 -0.567812--0.510188 -0.539 -0.567812--0.510188 -0.509 -0.529776--0.488224 -0.509 -0.529776--0.488224 -0.46 -0.4732496--0.4467504 -0.46 -0.4732496--0.4467504 -0.372 -0.3815256--0.3624744 -0.372 -0.3815256--0.3624744 -0.32 -0.326664--0.313336 -0.32 -0.326664--0.313336 -0.0652 -0.0736476--0.0567524 1.05e-51 -0.201 -0.2093104--0.1926896 1e-491 -0.408 -0.4162124--0.3997876 1e-2060 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 2.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003310/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.024331030962685 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-plink-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-plink-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_UKB_20211120 eGFRcys-overall-EA eGFRcys Quantitative UKB UK Biobank C+T (GT) Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 7 1.1e-1534 0.0278625989335598 Beta -0.534 -0.5634--0.5046 -0.534 -0.5634--0.5046 -0.51 -0.530972--0.489028 -0.51 -0.530972--0.489028 -0.462 -0.4753868--0.4486132 -0.462 -0.4753868--0.4486132 -0.378 -0.3876628--0.3683372 -0.378 -0.3876628--0.3683372 -0.325 -0.3316836--0.3183164 -0.325 -0.3316836--0.3183164 -0.07 -0.0784868--0.0615132 8.58e-59 -0.206 -0.2142516--0.1977484 1e-524 -0.416 -0.4241732--0.4078268 1e-2160 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 2.00e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003311/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.0243152819856361 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-dbslmm-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-dbslmm-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_UKB_20211120 eGFRcys-overall-EA eGFRcys Quantitative UKB UK Biobank DBSLMM Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 6375 3.6e-1416 0.0257561568308787 Beta -0.504 -0.5334--0.4746 -0.504 -0.5334--0.4746 -0.494 -0.514972--0.473028 -0.494 -0.514972--0.473028 -0.461 -0.4743868--0.4476132 -0.461 -0.4743868--0.4476132 -0.346 -0.3557216--0.3362784 -0.346 -0.3557216--0.3362784 -0.292 -0.2987032--0.2852968 -0.292 -0.2987032--0.2852968 -0.0039 -0.0123476-0.0045476 0.365 -0.151 -0.159232--0.142768 8.7e-283 -0.344 -0.3521732--0.3358268 1e-1480 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003312/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0243810909447303 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-prscs-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-prscs-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_UKB_20211120 eGFRcys-overall-EA eGFRcys Quantitative UKB UK Biobank PRS-CS Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 16685 3.3e-175 0.00398875628962818 Beta -0.136 -0.1654--0.1066 -0.136 -0.1654--0.1066 -0.147 -0.167972--0.126028 -0.147 -0.167972--0.126028 -0.131 -0.1444456--0.1175544 -0.131 -0.1444456--0.1175544 -0.117 -0.1267608--0.1072392 -0.117 -0.1267608--0.1072392 -0.0976 -0.104362--0.090838 -0.0976 -0.104362--0.090838 -0.0629 -0.0713672--0.0544328 4.57e-48 -0.102 -0.1104084--0.0935916 7.23e-125 -0.153 -0.1613888--0.1446112 1.1e-278 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003313/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0250920666575677 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-ea-lassosum-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-ea-lassosum-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_UKB_20211120 eGFRcys-overall-EA eGFRcys Quantitative UKB UK Biobank lassosum Large GWAS 28932557 http://ckdgen.imbi.uni-freiburg.de/files/Li2017/Published_eGFRcys_overall_EA.csv.gz 1954 6.3e-1704 0.0310114526526993 Beta -0.531 -0.5604--0.5016 -0.531 -0.5604--0.5016 -0.517 -0.537972--0.496028 -0.517 -0.537972--0.496028 -0.461 -0.4743868--0.4476132 -0.461 -0.4743868--0.4476132 -0.392 -0.401702--0.382298 -0.392 -0.401702--0.382298 -0.332 -0.3386836--0.3253164 -0.332 -0.3386836--0.3253164 -0.0947 -0.1031672--0.0862328 2e-106 -0.242 -0.25033--0.23367 1e-704 -0.444 -0.4522124--0.4357876 1e-2450 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 s=0.2;Lambda=0.01438 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003309/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-EA_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0242219147223954 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-pt-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-pt-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_MGI-Freeze3_20211120 PT ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_MGI-Freeze3_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 203 0.35 0.123129754275954 Beta 0.126 -0.95004-1.20204 0.126 -0.95004-1.20204 -0.125 -0.97564-0.72564 -0.125 -0.97564-0.72564 -0.107 -0.70088-0.48688 -0.107 -0.70088-0.48688 -0.27 -0.69336-0.15336 -0.27 -0.69336-0.15336 -0.299 -0.59496--0.00304 -0.299 -0.59496--0.00304 -0.359 -0.751-0.033 0.0736 -0.321 -0.71888-0.07688 0.115 -0.514 -0.89424--0.13376 0.0082 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 2.51e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003300/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.21270809329172 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-plink-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-plink-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_MGI-Freeze3_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 204 0.35 0.120726467825745 Beta 0.126 -0.95004-1.20204 0.126 -0.95004-1.20204 -0.125 -0.97564-0.72564 -0.125 -0.97564-0.72564 -0.411 -1.00292-0.18092 -0.411 -1.00292-0.18092 -0.27 -0.69336-0.15336 -0.27 -0.69336-0.15336 -0.299 -0.59496--0.00304 -0.299 -0.59496--0.00304 -0.376 -0.77192-0.01992 0.0622 -0.293 -0.68892-0.10292 0.146 -0.526 -0.91408--0.13792 0.00788 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 2.51e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003301/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.212697695346573 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-dbslmm-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-dbslmm-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 695827 0.73 0.0216598670408342 Beta -0.382 -1.45804-0.69404 -0.382 -1.45804-0.69404 -0.276 -1.12272-0.57072 -0.276 -1.12272-0.57072 -0.162 -0.73824-0.41424 -0.162 -0.73824-0.41424 -0.11 -0.52748-0.30748 -0.11 -0.52748-0.30748 -0.195 -0.48312-0.09312 -0.195 -0.48312-0.09312 -0.0914 -0.48928-0.30648 0.652 -0.0199 -0.40994-0.37014 0.92 -0.225 -0.58368-0.13368 0.218 FALSE FALSE FALSE TRUE Both 108 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003302/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214352271504934 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-prscs-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-prscs-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 933013 0.43 0.074719982881584 Beta 0.61 -0.468-1.688 0.61 -0.468-1.688 0.151 -0.69964-1.00164 0.151 -0.69964-1.00164 -0.237 -0.81716-0.34316 -0.237 -0.81716-0.34316 -0.21 -0.64316-0.22316 -0.21 -0.64316-0.22316 -0.28 -0.58576-0.02576 -0.28 -0.58576-0.02576 -0.213 -0.61088-0.18488 0.293 -0.45 -0.85964--0.04036 0.0312 -0.522 -0.963--0.081 0.0205 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 PRS_auto_traiteGFR_prefixeGFRcys=_overall_IV_2GC https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003303/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.213257199111893 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-lassosum-mgi-freeze3-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-lassosum-mgi-freeze3-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 62133 0.68 0.0476071709903749 Beta -0.269 -1.347-0.809 -0.269 -1.347-0.809 -0.501 -1.334-0.332 -0.501 -1.334-0.332 -0.16 -0.73232-0.41232 -0.16 -0.73232-0.41232 -0.0451 -0.47042-0.38022 -0.0451 -0.47042-0.38022 -0.256 -0.56176-0.04976 -0.256 -0.56176-0.04976 0.176 -0.20816-0.56016 0.369 -0.285 -0.64172-0.07172 0.117 -0.192 -0.59184-0.20784 0.347 FALSE TRUE FALSE TRUE Both 108 0 GRCh37/hg19 s=0.9;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003299/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.214247797072791 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-pt-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-pt-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_UKB_20211120 PT ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_UKB_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative UKB UK Biobank C+T (DS) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 2 9e-1713 0.0315257707288783 Beta -0.498 -0.5125628--0.4834372 -0.498 -0.5125628--0.4834372 -0.498 -0.5125628--0.4834372 -0.498 -0.5125628--0.4834372 -0.476 -0.4893084--0.4626916 -0.476 -0.4893084--0.4626916 -0.336 -0.3422524--0.3297476 -0.336 -0.3422524--0.3297476 -0.336 -0.3422524--0.3297476 -0.336 -0.3422524--0.3297476 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 5.01e-46 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003315/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.0242170524102303 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-plink-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-plink-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_UKB_20211120 PLINK ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_UKB_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative UKB UK Biobank C+T (GT) Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 2 9e-1713 0.0315257707288783 Beta -0.498 -0.5125628--0.4834372 -0.498 -0.5125628--0.4834372 -0.498 -0.5125628--0.4834372 -0.498 -0.5125628--0.4834372 -0.476 -0.4893084--0.4626916 -0.476 -0.4893084--0.4626916 -0.336 -0.3422524--0.3297476 -0.336 -0.3422524--0.3297476 -0.336 -0.3422524--0.3297476 -0.336 -0.3422524--0.3297476 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 5.01e-46 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003316/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.0242170524102303 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-dbslmm-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-dbslmm-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_UKB_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative UKB UK Biobank DBSLMM Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 594334 1.4e-411 0.00809410989741878 Beta -0.269 -0.2984--0.2396 -0.269 -0.2984--0.2396 -0.236 -0.256972--0.215028 -0.236 -0.256972--0.215028 -0.211 -0.2244456--0.1975544 -0.211 -0.2244456--0.1975544 -0.195 -0.2047608--0.1852392 -0.195 -0.2047608--0.1852392 -0.161 -0.167762--0.154238 -0.161 -0.167762--0.154238 -0.0774 -0.0856712--0.0691288 3.61e-75 -0.137 -0.1454476--0.1285524 1.49e-220 -0.232 -0.240232--0.223768 1e-666 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003317/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0249535219253702 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-prscs-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-prscs-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_UKB_20211120 PRSCS ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_UKB_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative UKB UK Biobank PRS-CS Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 933341 6.4e-1290 0.0251254465327599 Beta -0.484 -0.5134--0.4546 -0.484 -0.5134--0.4546 -0.441 -0.461972--0.420028 -0.441 -0.461972--0.420028 -0.389 -0.4024064--0.3755936 -0.389 -0.4024064--0.3755936 -0.339 -0.3487216--0.3292784 -0.339 -0.3487216--0.3292784 -0.286 -0.2927228--0.2792772 -0.286 -0.2927228--0.2792772 -0.129 -0.1374476--0.1205524 3.14e-198 -0.235 -0.2434084--0.2265916 1e-655 -0.408 -0.416232--0.399768 1e-2040 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003318/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0244515944221746 normal_range exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-lassosum-ukb-20211120 exprsweb-egfr-cystatinc-egfrcys-overall-iv-2gc-lassosum-ukb-20211120 ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_UKB_20211120 eGFRcys-overall-IV-2GC eGFRcys Quantitative UKB UK Biobank lassosum Large GWAS 26831199 http://ckdgen.imbi.uni-freiburg.de/files/Pattaro2016/formatted_round3meta_eGFRcys_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz 62626 6.7e-1908 0.035574071380828 Beta -0.58 -0.6094--0.5506 -0.58 -0.6094--0.5506 -0.544 -0.564972--0.523028 -0.544 -0.564972--0.523028 -0.478 -0.4913672--0.4646328 -0.478 -0.4913672--0.4646328 -0.413 -0.4226824--0.4033176 -0.413 -0.4226824--0.4033176 -0.351 -0.3576836--0.3443164 -0.351 -0.3576836--0.3443164 -0.116 -0.1245064--0.1074936 3.26e-157 -0.261 -0.2691144--0.2528856 1e-863 -0.476 -0.4841144--0.4678856 1e-2880 TRUE TRUE FALSE TRUE Both 195118 0 GRCh37/hg19 s=0.9;Lambda=0.01438 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003314/ScoringFiles/ phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_eGFR-CystatinC_eGFRcys-overall-IV-2GC_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0241103327633831 normal_range exprsweb-hypertension-finngen-r4-fg-pt-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-fg-pt-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-FG_PT_MGI-Freeze3_20211120 PT ExPRSweb_Hypertension_finngen-R4-FG_PT_MGI-Freeze3_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 2860 0.3 0.000156969 0.192 0.506 0.497-0.515 OR 0.988 0.803-1.21 0.988 0.803-1.21 0.984 0.849-1.14 0.984 0.849-1.14 1.07 0.972-1.18 1.07 0.972-1.18 1.05 0.976-1.12 1.05 0.976-1.12 1.04 0.993-1.09 1.04 0.993-1.09 0.975 0.919-1.03 0.406 1.06 0.999-1.12 0.0561 1.06 0.995-1.12 0.0716 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 3.98e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003005/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191894404816285 binary_exposure exprsweb-hypertension-finngen-r4-fg-plink-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-fg-plink-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-FG_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Hypertension_finngen-R4-FG_PLINK_MGI-Freeze3_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 5212 0.4 0.000201048 0.192 0.502 0.492-0.511 OR 0.932 0.757-1.15 0.932 0.757-1.15 0.907 0.783-1.05 0.907 0.783-1.05 0.935 0.85-1.03 0.935 0.85-1.03 0.956 0.892-1.02 0.956 0.892-1.02 0.972 0.926-1.02 0.972 0.926-1.02 1 0.946-1.06 0.927 0.99 0.933-1.05 0.725 0.968 0.913-1.03 0.281 FALSE TRUE FALSE TRUE Both 11612 11704 GRCh37/hg19 1.00e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003006/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191896719225065 binary_exposure exprsweb-hypertension-finngen-r4-fg-dbslmm-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-fg-dbslmm-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_MGI-Freeze3_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 359 0.31 7.21084e-05 0.192 0.498 0.489-0.507 OR 1.16 0.942-1.43 1.16 0.942-1.43 1.17 1.01-1.35 1.17 1.01-1.35 1.03 0.939-1.14 1.03 0.939-1.14 1.02 0.952-1.09 1.02 0.952-1.09 1 0.955-1.05 1 0.955-1.05 1 0.945-1.06 0.954 1.01 0.955-1.07 0.664 1.01 0.949-1.07 0.83 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003007/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191900900551507 binary_exposure exprsweb-hypertension-finngen-r4-fg-prscs-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-fg-prscs-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_MGI-Freeze3_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 12076 0.41 1.97971e-07 0.192 0.5 0.49-0.508 OR 0.893 0.726-1.1 0.893 0.726-1.1 0.892 0.769-1.03 0.892 0.769-1.03 0.947 0.861-1.04 0.947 0.861-1.04 1.01 0.944-1.08 1.01 0.944-1.08 1.01 0.96-1.06 1.01 0.96-1.06 0.963 0.908-1.02 0.2 0.995 0.938-1.05 0.854 0.99 0.934-1.05 0.738 FALSE TRUE FALSE TRUE Both 11612 11704 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003008/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191902917135257 binary_exposure exprsweb-hypertension-finngen-r4-fg-lassosum-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-fg-lassosum-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_MGI-Freeze3_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 4943 0.25 0.000122505 0.192 0.51 0.5-0.519 OR 0.87 0.708-1.07 0.87 0.708-1.07 1.01 0.873-1.17 1.01 0.873-1.17 1 0.912-1.1 1 0.912-1.1 0.954 0.891-1.02 0.954 0.891-1.02 0.999 0.952-1.05 0.999 0.952-1.05 1.02 0.961-1.08 0.538 1.01 0.951-1.07 0.788 1.01 0.95-1.07 0.801 FALSE TRUE FALSE TRUE Both 11612 11704 GRCh37/hg19 s=0.2;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003004/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191897890122605 binary_exposure exprsweb-hypertension-finngen-r4-fg-pt-ukb-20211120 exprsweb-hypertension-finngen-r4-fg-pt-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-FG_PT_UKB_20211120 PT ExPRSweb_Hypertension_finngen-R4-FG_PT_UKB_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank C+T (DS) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 24 0.16 4.79212e-05 0.143 0.506 0.503-0.509 OR 1.02 0.945-1.11 1.02 0.945-1.11 1.01 0.97-1.05 1.01 0.97-1.05 0.997 0.962-1.03 0.997 0.962-1.03 0.996 0.97-1.02 0.996 0.97-1.02 0.995 0.977-1.01 0.995 0.977-1.01 1.01 0.991-1.04 0.232 1.03 1-1.05 0.03 1.01 0.984-1.03 0.56 FALSE TRUE FALSE TRUE Both 38801 164838 GRCh37/hg19 3.98e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003020/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.143105513020161 binary_exposure exprsweb-hypertension-finngen-r4-fg-plink-ukb-20211120 exprsweb-hypertension-finngen-r4-fg-plink-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-FG_PLINK_UKB_20211120 PLINK ExPRSweb_Hypertension_finngen-R4-FG_PLINK_UKB_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank C+T (GT) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 24 0.085 0.000101413 0.143 0.503 0.5-0.507 OR 1.03 0.947-1.11 1.03 0.947-1.11 1.07 1.01-1.13 1.07 1.01-1.13 1.06 1.02-1.1 1.06 1.02-1.1 1.04 1.02-1.07 1.04 1.02-1.07 1.04 1.02-1.06 1.04 1.02-1.06 1.02 0.995-1.04 0.124 1.01 0.989-1.04 0.307 1.05 1.03-1.08 6.01e-06 FALSE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003021/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.143104244105135 binary_exposure exprsweb-hypertension-finngen-r4-fg-dbslmm-ukb-20211120 exprsweb-hypertension-finngen-r4-fg-dbslmm-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_UKB_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank DBSLMM Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 56 0.8 1.25382e-05 0.143 0.491 0.488-0.494 OR 1.01 0.928-1.09 1.01 0.928-1.09 0.997 0.941-1.06 0.997 0.941-1.06 1.01 0.976-1.05 1.01 0.976-1.05 1.02 0.997-1.05 1.02 0.997-1.05 1.02 1-1.04 1.02 1-1.04 1.01 0.988-1.03 0.348 1.01 0.983-1.03 0.605 1.03 1-1.05 0.0273 FALSE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003022/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.143106270536886 binary_exposure exprsweb-hypertension-finngen-r4-fg-prscs-ukb-20211120 exprsweb-hypertension-finngen-r4-fg-prscs-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_UKB_20211120 PRSCS ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_UKB_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank PRS-CS Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 12097 0.04 5.44244e-05 0.143 0.506 0.502-0.509 OR 1.01 0.93-1.09 1.01 0.93-1.09 0.995 0.939-1.05 0.995 0.939-1.05 1.01 0.974-1.05 1.01 0.974-1.05 1.02 0.992-1.05 1.02 0.992-1.05 1.02 1-1.04 1.02 1-1.04 1.01 0.988-1.03 0.34 1.03 1-1.05 0.0173 1.03 1.01-1.06 0.00678 TRUE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003023/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.143102258507153 binary_exposure exprsweb-hypertension-finngen-r4-fg-lassosum-ukb-20211120 exprsweb-hypertension-finngen-r4-fg-lassosum-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_UKB_20211120 finngen-R4-FG Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank lassosum Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_FG_HYPERTENSION.gz 6731 0.0079 0.000115806 0.143 0.505 0.502-0.509 OR 1.05 0.965-1.13 1.05 0.965-1.13 1.05 0.993-1.11 1.05 0.993-1.11 1.06 1.02-1.1 1.06 1.02-1.1 1.05 1.02-1.08 1.05 1.02-1.08 1.04 1.02-1.06 1.04 1.02-1.06 1.01 0.984-1.03 0.53 1.01 0.99-1.04 0.28 1.05 1.03-1.07 2.45e-05 TRUE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 s=0.2;Lambda=0.00162 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003019/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-FG_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.143101559228475 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-pt-mgi-freeze3-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-pt-mgi-freeze3-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_MGI-Freeze3_20211120 PT ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_MGI-Freeze3_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 5300 0.89 0.000353127 0.183 0.5 0.491-0.509 OR 1 0.798-1.25 1 0.798-1.25 1.02 0.867-1.19 1.02 0.867-1.19 0.941 0.849-1.04 0.941 0.849-1.04 0.959 0.89-1.03 0.959 0.89-1.03 0.974 0.926-1.03 0.974 0.926-1.03 1.02 0.962-1.09 0.45 0.991 0.931-1.06 0.788 0.983 0.923-1.05 0.599 FALSE TRUE FALSE TRUE Both 5443 15911 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003205/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182527344616205 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-plink-mgi-freeze3-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-plink-mgi-freeze3-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 9873 0.12 0.000237538 0.183 0.49 0.48-0.499 OR 1.02 0.82-1.28 1.02 0.82-1.28 1.07 0.914-1.25 1.07 0.914-1.25 1 0.905-1.11 1 0.905-1.11 0.961 0.892-1.04 0.961 0.892-1.04 0.971 0.922-1.02 0.971 0.922-1.02 0.933 0.876-0.992 0.028 0.929 0.873-0.989 0.0209 0.927 0.871-0.987 0.0181 FALSE TRUE FALSE TRUE Both 5443 15911 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003206/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182508464144316 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-dbslmm-mgi-freeze3-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-dbslmm-mgi-freeze3-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 355 0.11 4.90552e-07 0.183 0.492 0.484-0.501 OR 0.982 0.785-1.23 0.982 0.785-1.23 1.07 0.913-1.25 1.07 0.913-1.25 0.971 0.877-1.08 0.971 0.877-1.08 0.973 0.904-1.05 0.973 0.904-1.05 1.01 0.958-1.06 1.01 0.958-1.06 0.976 0.917-1.04 0.447 0.943 0.885-1 0.0661 0.981 0.922-1.04 0.554 FALSE TRUE FALSE TRUE Both 5443 15911 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003207/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182507887257446 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-prscs-mgi-freeze3-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-prscs-mgi-freeze3-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 12076 0.34 0.000147696 0.183 0.505 0.497-0.514 OR 0.893 0.711-1.12 0.893 0.711-1.12 0.894 0.76-1.05 0.894 0.76-1.05 1.05 0.953-1.17 1.05 0.953-1.17 1.11 1.03-1.19 1.11 1.03-1.19 1.07 1.02-1.13 1.07 1.02-1.13 0.988 0.927-1.05 0.702 0.99 0.929-1.05 0.752 1.06 0.999-1.13 0.0556 FALSE FALSE FALSE TRUE Both 5443 15911 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003208/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182516022355329 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-lassosum-mgi-freeze3-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-lassosum-mgi-freeze3-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 4360 0.28 0.000112857 0.183 0.49 0.482-0.499 OR 1.07 0.86-1.33 1.07 0.86-1.33 1.15 0.984-1.34 1.15 0.984-1.34 1.13 1.02-1.25 1.13 1.02-1.25 1.06 0.985-1.14 1.06 0.985-1.14 1.02 0.968-1.07 1.02 0.968-1.07 0.967 0.908-1.03 0.29 0.967 0.908-1.03 0.294 0.997 0.937-1.06 0.925 FALSE TRUE FALSE TRUE Both 5443 15911 GRCh37/hg19 s=1;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003204/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.182519801070582 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-pt-ukb-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-pt-ukb-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_UKB_20211120 PT ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_UKB_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary UKB UK Biobank C+T (DS) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 1209 0.12 0.000190712 0.0107 0.489 0.477-0.501 OR 0.661 0.459-0.951 0.661 0.459-0.951 0.82 0.65-1.03 0.82 0.65-1.03 0.882 0.764-1.02 0.882 0.764-1.02 0.946 0.855-1.05 0.946 0.855-1.05 0.958 0.894-1.03 0.958 0.894-1.03 0.917 0.844-0.996 0.0401 0.942 0.867-1.02 0.153 0.913 0.841-0.992 0.0324 FALSE TRUE FALSE TRUE Both 2209 201476 GRCh37/hg19 5.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003215/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_UKB_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.0106915895895818 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-plink-ukb-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-plink-ukb-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_UKB_20211120 PLINK ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_UKB_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary UKB UK Biobank C+T (GT) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 688 0.7 0.000368682 0.0107 0.497 0.485-0.509 OR 0.733 0.521-1.03 0.733 0.521-1.03 0.941 0.758-1.17 0.941 0.758-1.17 0.939 0.817-1.08 0.939 0.817-1.08 0.987 0.894-1.09 0.987 0.894-1.09 0.963 0.898-1.03 0.963 0.898-1.03 1.02 0.937-1.1 0.688 0.912 0.838-0.992 0.0321 0.941 0.865-1.02 0.152 FALSE TRUE FALSE TRUE Both 2209 201476 GRCh37/hg19 2.51e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003216/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.0106917244329923 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-dbslmm-ukb-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-dbslmm-ukb-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_UKB_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary UKB UK Biobank DBSLMM Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 46 0.33 1.37327e-06 0.0107 0.485 0.475-0.495 OR 1.12 0.85-1.49 1.12 0.85-1.49 1.02 0.83-1.26 1.02 0.83-1.26 0.903 0.784-1.04 0.903 0.784-1.04 1.01 0.917-1.12 1.01 0.917-1.12 0.985 0.919-1.05 0.985 0.919-1.05 1.05 0.967-1.14 0.237 1.05 0.964-1.14 0.265 1.02 0.935-1.11 0.684 FALSE FALSE FALSE TRUE Both 2209 201476 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003217/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.0106916866344584 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-prscs-ukb-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-prscs-ukb-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_UKB_20211120 PRSCS ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_UKB_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary UKB UK Biobank PRS-CS Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 12097 0.89 4.86966e-06 0.0107 0.5 0.488-0.512 OR 1.06 0.795-1.41 1.06 0.795-1.41 1.02 0.83-1.26 1.02 0.83-1.26 0.973 0.848-1.12 0.973 0.848-1.12 0.993 0.9-1.1 0.993 0.9-1.1 0.973 0.908-1.04 0.973 0.908-1.04 1.04 0.953-1.13 0.411 1.03 0.943-1.12 0.554 0.992 0.911-1.08 0.843 FALSE FALSE FALSE TRUE Both 2209 201476 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003218/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.0106917532261349 binary_exposure exprsweb-apnoea-finngen-r4-g6-sleepapno-lassosum-ukb-20211120 exprsweb-apnoea-finngen-r4-g6-sleepapno-lassosum-ukb-20211120 ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_UKB_20211120 finngen-R4-G6-SLEEPAPNO Sleep apnoea Binary UKB UK Biobank lassosum Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_G6_SLEEPAPNO.gz 5812 0.86 0.000404419 0.0107 0.5 0.489-0.513 OR 0.998 0.741-1.34 0.998 0.741-1.34 0.927 0.746-1.15 0.927 0.746-1.15 0.994 0.868-1.14 0.994 0.868-1.14 0.968 0.876-1.07 0.968 0.876-1.07 0.978 0.913-1.05 0.978 0.913-1.05 0.901 0.829-0.979 0.0135 0.918 0.846-0.998 0.0435 0.919 0.846-0.998 0.0445 FALSE FALSE FALSE TRUE Both 2209 201476 GRCh37/hg19 s=0.9;Lambda=0.00428 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003214/ScoringFiles/ phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_apnoea_finngen-R4-G6-SLEEPAPNO_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.0106917556008907 binary_exposure exprsweb-hypertension-finngen-r4-i9-pt-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-i9-pt-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-I9_PT_MGI-Freeze3_20211120 PT ExPRSweb_Hypertension_finngen-R4-I9_PT_MGI-Freeze3_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 1894 0.14 6.19495e-05 0.192 0.507 0.498-0.515 OR 1.01 0.816-1.24 1.01 0.816-1.24 0.985 0.85-1.14 0.985 0.85-1.14 0.999 0.909-1.1 0.999 0.909-1.1 1.01 0.947-1.09 1.01 0.947-1.09 1.06 1.01-1.11 1.06 1.01-1.11 1.06 1-1.13 0.0457 1.03 0.968-1.09 0.386 1.09 1.03-1.16 0.00439 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 2.00e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003010/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191883011864916 binary_exposure exprsweb-hypertension-finngen-r4-i9-plink-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-i9-plink-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-I9_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Hypertension_finngen-R4-I9_PLINK_MGI-Freeze3_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 3300 0.13 0.000178097 0.192 0.505 0.496-0.514 OR 1.2 0.976-1.48 1.2 0.976-1.48 1.08 0.929-1.25 1.08 0.929-1.25 1.05 0.955-1.15 1.05 0.955-1.15 1.04 0.973-1.12 1.04 0.973-1.12 1.05 0.999-1.1 1.05 0.999-1.1 0.985 0.929-1.04 0.613 1.02 0.958-1.08 0.602 1.05 0.991-1.11 0.0974 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 3.98e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003011/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191870317639834 binary_exposure exprsweb-hypertension-finngen-r4-i9-dbslmm-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-i9-dbslmm-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_MGI-Freeze3_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 361 0.2 5.65828e-05 0.192 0.502 0.493-0.511 OR 1.21 0.986-1.49 1.21 0.986-1.49 1.16 1-1.34 1.16 1-1.34 1.03 0.937-1.13 1.03 0.937-1.13 1.02 0.951-1.09 1.02 0.951-1.09 0.996 0.949-1.04 0.996 0.949-1.04 0.974 0.919-1.03 0.375 1.02 0.96-1.08 0.544 0.997 0.94-1.06 0.908 FALSE FALSE FALSE TRUE Both 11612 11704 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003012/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191897388196413 binary_exposure exprsweb-hypertension-finngen-r4-i9-prscs-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-i9-prscs-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_MGI-Freeze3_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 12076 0.52 1.84633e-05 0.192 0.5 0.491-0.509 OR 0.959 0.78-1.18 0.959 0.78-1.18 0.987 0.853-1.14 0.987 0.853-1.14 0.917 0.834-1.01 0.917 0.834-1.01 0.97 0.905-1.04 0.97 0.905-1.04 1 0.955-1.05 1 0.955-1.05 0.982 0.926-1.04 0.544 0.995 0.938-1.05 0.865 0.993 0.937-1.05 0.817 FALSE TRUE FALSE TRUE Both 11612 11704 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003013/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191904789026231 binary_exposure exprsweb-hypertension-finngen-r4-i9-lassosum-mgi-freeze3-20211120 exprsweb-hypertension-finngen-r4-i9-lassosum-mgi-freeze3-20211120 ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_MGI-Freeze3_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 5226 0.48 0.000113421 0.192 0.512 0.503-0.521 OR 1.04 0.845-1.28 1.04 0.845-1.28 1.13 0.975-1.31 1.13 0.975-1.31 1.08 0.984-1.19 1.08 0.984-1.19 1.05 0.981-1.12 1.05 0.981-1.12 1.02 0.974-1.06 1.02 0.974-1.06 1.02 0.965-1.09 0.439 0.988 0.933-1.05 0.672 1.04 0.98-1.1 0.2 FALSE TRUE FALSE TRUE Both 11612 11704 GRCh37/hg19 s=0.2;Lambda=0.01833 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003009/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.191902628014447 binary_exposure exprsweb-hypertension-finngen-r4-i9-pt-ukb-20211120 exprsweb-hypertension-finngen-r4-i9-pt-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-I9_PT_UKB_20211120 PT ExPRSweb_Hypertension_finngen-R4-I9_PT_UKB_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank C+T (DS) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 9 0.12 4.75951e-05 0.143 0.504 0.501-0.507 OR 1.02 0.942-1.1 1.02 0.942-1.1 1.03 0.99-1.06 1.03 0.99-1.06 1.03 0.99-1.06 1.03 0.99-1.06 1.01 0.982-1.04 1.01 0.982-1.04 0.991 0.973-1.01 0.991 0.973-1.01 1.01 0.988-1.03 0.371 1.02 0.991-1.04 0.231 1 0.977-1.02 0.991 FALSE TRUE FALSE TRUE Both 38801 164838 GRCh37/hg19 5.00e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003025/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_PT_UKB_20211120/exclusion.tsv 2021-01-10 0.143105528710378 binary_exposure exprsweb-hypertension-finngen-r4-i9-plink-ukb-20211120 exprsweb-hypertension-finngen-r4-i9-plink-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-I9_PLINK_UKB_20211120 PLINK ExPRSweb_Hypertension_finngen-R4-I9_PLINK_UKB_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank C+T (GT) Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 9 0.31 5.34674e-05 0.143 0.502 0.498-0.505 OR 1.03 0.945-1.11 1.03 0.945-1.11 1.03 0.973-1.09 1.03 0.973-1.09 1.04 1-1.08 1.04 1-1.08 1.04 1.01-1.07 1.04 1.01-1.07 1.02 1-1.04 1.02 1-1.04 0.984 0.962-1.01 0.175 1.01 0.984-1.03 0.56 1.02 0.996-1.04 0.0972 FALSE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 1.00e-01 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003026/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 0.143105785793937 binary_exposure exprsweb-hypertension-finngen-r4-i9-dbslmm-ukb-20211120 exprsweb-hypertension-finngen-r4-i9-dbslmm-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_UKB_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank DBSLMM Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 59 0.99 1.42132e-05 0.143 0.492 0.489-0.494 OR 1 0.922-1.09 1 0.922-1.09 1.01 0.957-1.07 1.01 0.957-1.07 1.02 0.979-1.05 1.02 0.979-1.05 1.02 0.996-1.05 1.02 0.996-1.05 1.01 0.995-1.03 1.01 0.995-1.03 0.994 0.971-1.02 0.583 1.01 0.988-1.03 0.342 1.01 0.992-1.04 0.21 FALSE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003027/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 0.143106556099251 binary_exposure exprsweb-hypertension-finngen-r4-i9-prscs-ukb-20211120 exprsweb-hypertension-finngen-r4-i9-prscs-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_UKB_20211120 PRSCS ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_UKB_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank PRS-CS Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 12097 0.13 4.60055e-05 0.143 0.505 0.502-0.509 OR 0.984 0.905-1.07 0.984 0.905-1.07 1.02 0.96-1.08 1.02 0.96-1.08 1.02 0.979-1.06 1.02 0.979-1.06 1.03 1-1.06 1.03 1-1.06 1.02 0.998-1.04 1.02 0.998-1.04 1.02 0.996-1.04 0.101 1.02 1-1.05 0.0536 1.03 1.01-1.05 0.0101 FALSE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003028/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 0.14310404082775 binary_exposure exprsweb-hypertension-finngen-r4-i9-lassosum-ukb-20211120 exprsweb-hypertension-finngen-r4-i9-lassosum-ukb-20211120 ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_UKB_20211120 finngen-R4-I9 Diagnoses - main ICD10: I10 Essential (primary) hypertension Binary UKB UK Biobank lassosum Large GWAS FinnGen https://storage.googleapis.com/finngen-public-data-r4/summary_stats/finngen_R4_I9_HYPTENS.gz 7123 0.094 6.17607e-05 0.143 0.503 0.5-0.507 OR 1.06 0.978-1.15 1.06 0.978-1.15 1.06 1-1.12 1.06 1-1.12 1.04 0.998-1.07 1.04 0.998-1.07 1.04 1.02-1.07 1.04 1.02-1.07 1.03 1.02-1.05 1.03 1.02-1.05 1 0.978-1.02 0.966 1.01 0.988-1.03 0.338 1.04 1.01-1.06 0.00136 FALSE FALSE FALSE TRUE Both 38801 164838 GRCh37/hg19 s=0.5;Lambda=0.001 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS003024/ScoringFiles/ phewas/ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Hypertension_finngen-R4-I9_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 0.14310498562987 binary_exposure exprsweb-age-at-menopause-ieu-a-1004-pt-ukb-20211120 exprsweb-age-at-menopause-ieu-a-1004-pt-ukb-20211120 ExPRSweb_Age-at-menopause_ieu-a-1004_PT_UKB_20211120 PT ExPRSweb_Age-at-menopause_ieu-a-1004_PT_UKB_20211120 ieu-a-1004 Age_at_menopause Quantitative UKB UK Biobank C+T (DS) Large GWAS 26414677 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1004/ieu-a-1004.vcf.gz 159 3.6e-57 0.00404151318744088 Beta 0.189 0.136472-0.241528 0.189 0.136472-0.241528 0.174 0.136564-0.211436 0.174 0.136564-0.211436 0.151 0.126892-0.175108 0.151 0.126892-0.175108 0.134 0.1165364-0.1514636 0.134 0.1165364-0.1514636 0.104 0.0919068-0.1160932 0.104 0.0919068-0.1160932 0.0563 0.041796-0.070804 2.79e-14 0.101 0.0863784-0.1156216 4.13e-42 0.156 0.1412216-0.1707784 9.37e-96 TRUE FALSE FALSE TRUE Both 69801 0 GRCh37/hg19 7.94e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002821/ScoringFiles/ phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_PT_UKB_20211120/exclusion.tsv 2021-01-10 178.032536967786 normal_range years exprsweb-age-at-menopause-ieu-a-1004-plink-ukb-20211120 exprsweb-age-at-menopause-ieu-a-1004-plink-ukb-20211120 ExPRSweb_Age-at-menopause_ieu-a-1004_PLINK_UKB_20211120 PLINK ExPRSweb_Age-at-menopause_ieu-a-1004_PLINK_UKB_20211120 ieu-a-1004 Age_at_menopause Quantitative UKB UK Biobank C+T (GT) Large GWAS 26414677 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1004/ieu-a-1004.vcf.gz 159 3.6e-57 0.00404151318744088 Beta 0.189 0.136472-0.241528 0.189 0.136472-0.241528 0.174 0.136564-0.211436 0.174 0.136564-0.211436 0.151 0.126892-0.175108 0.151 0.126892-0.175108 0.134 0.1165364-0.1514636 0.134 0.1165364-0.1514636 0.104 0.0919068-0.1160932 0.104 0.0919068-0.1160932 0.0563 0.041796-0.070804 2.79e-14 0.101 0.0863784-0.1156216 4.13e-42 0.156 0.1412216-0.1707784 9.37e-96 TRUE FALSE FALSE TRUE Both 69801 0 GRCh37/hg19 7.94e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002822/ScoringFiles/ phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 178.032536967786 normal_range years exprsweb-age-at-menopause-ieu-a-1004-dbslmm-ukb-20211120 exprsweb-age-at-menopause-ieu-a-1004-dbslmm-ukb-20211120 ExPRSweb_Age-at-menopause_ieu-a-1004_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Age-at-menopause_ieu-a-1004_DBSLMM_UKB_20211120 ieu-a-1004 Age_at_menopause Quantitative UKB UK Biobank DBSLMM Large GWAS 26414677 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1004/ieu-a-1004.vcf.gz 1379304 1.9e-14 0.00153627056561811 Beta 0.116 0.063276-0.168724 0.116 0.063276-0.168724 0.103 0.065564-0.140436 0.103 0.065564-0.140436 0.084 0.059892-0.108108 0.084 0.059892-0.108108 0.0604 0.0429364-0.0778636 0.0604 0.0429364-0.0778636 0.0579 0.0457872-0.0700128 0.0579 0.0457872-0.0700128 0.0386 0.0239784-0.0532216 2.3e-07 0.0623 0.0476-0.077 1e-16 0.0915 0.0765452-0.1064548 3.91e-33 TRUE FALSE FALSE TRUE Both 69801 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002823/ScoringFiles/ phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 178.530288723354 normal_range years exprsweb-age-at-menopause-ieu-a-1004-prscs-ukb-20211120 exprsweb-age-at-menopause-ieu-a-1004-prscs-ukb-20211120 ExPRSweb_Age-at-menopause_ieu-a-1004_PRSCS_UKB_20211120 PRSCS ExPRSweb_Age-at-menopause_ieu-a-1004_PRSCS_UKB_20211120 ieu-a-1004 Age_at_menopause Quantitative UKB UK Biobank PRS-CS Large GWAS 26414677 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1004/ieu-a-1004.vcf.gz 894484 1.5e-24 0.00115940842783643 Beta 0.0794 0.026676-0.132124 0.0794 0.026676-0.132124 0.0801 0.042664-0.117536 0.0801 0.042664-0.117536 0.0756 0.051492-0.099708 0.0756 0.051492-0.099708 0.0647 0.0472168-0.0821832 0.0647 0.0472168-0.0821832 0.0586 0.0464872-0.0707128 0.0586 0.0464872-0.0707128 0.0369 0.0222392-0.0515608 7.75e-07 0.0608 0.0460216-0.0755784 7.07e-16 0.0914 0.0765432-0.1062568 1.55e-33 TRUE FALSE FALSE TRUE Both 69801 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002824/ScoringFiles/ phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 178.412970200216 normal_range years exprsweb-age-at-menopause-ieu-a-1004-lassosum-ukb-20211120 exprsweb-age-at-menopause-ieu-a-1004-lassosum-ukb-20211120 ExPRSweb_Age-at-menopause_ieu-a-1004_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Age-at-menopause_ieu-a-1004_LASSOSUM_UKB_20211120 ieu-a-1004 Age_at_menopause Quantitative UKB UK Biobank lassosum Large GWAS 26414677 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1004/ieu-a-1004.vcf.gz 99745 3.4e-22 0.00136072261990898 Beta 0.0829 0.030176-0.135624 0.0829 0.030176-0.135624 0.0749 0.037464-0.112336 0.0749 0.037464-0.112336 0.065 0.040892-0.089108 0.065 0.040892-0.089108 0.0642 0.0467364-0.0816636 0.0642 0.0467364-0.0816636 0.0645 0.0524068-0.0765932 0.0645 0.0524068-0.0765932 0.0362 0.0214216-0.0509784 1.52e-06 0.0633 0.0485608-0.0780392 4.14e-17 0.0972 0.0824216-0.1119784 5.93e-38 TRUE FALSE FALSE TRUE Both 69801 0 GRCh37/hg19 s=0.9;Lambda=0.00886 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002820/ScoringFiles/ phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menopause_ieu-a-1004_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 178.440236680736 normal_range years exprsweb-age-at-menarche-ieu-a-1095-pt-ukb-20211120 exprsweb-age-at-menarche-ieu-a-1095-pt-ukb-20211120 ExPRSweb_Age-at-menarche_ieu-a-1095_PT_UKB_20211120 PT ExPRSweb_Age-at-menarche_ieu-a-1095_PT_UKB_20211120 ieu-a-1095 Age_at_menarche Quantitative UKB UK Biobank C+T (DS) Large GWAS 25231870 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1095/ieu-a-1095.vcf.gz 13852 4.2e-285 0.0113875144317581 Beta 0.0718 -0.012872-0.156472 0.0718 -0.012872-0.156472 0.0584 -0.001772-0.118572 0.0584 -0.001772-0.118572 0.0429 0.004092-0.081708 0.0429 0.004092-0.081708 0.0336 0.005376-0.061824 0.0336 0.005376-0.061824 0.0264 0.0068588-0.0459412 0.0264 0.0068588-0.0459412 0.01 -0.013912-0.033912 0.41 0.000558 -0.024726-0.025842 0.97 0.00397 -0.019942-0.027882 0.74 TRUE FALSE FALSE TRUE Both 110333 0 GRCh37/hg19 2.51e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002816/ScoringFiles/ phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_PT_UKB_20211120/exclusion.tsv 2021-01-10 7.61137221985377 normal_range years exprsweb-age-at-menarche-ieu-a-1095-plink-ukb-20211120 exprsweb-age-at-menarche-ieu-a-1095-plink-ukb-20211120 ExPRSweb_Age-at-menarche_ieu-a-1095_PLINK_UKB_20211120 PLINK ExPRSweb_Age-at-menarche_ieu-a-1095_PLINK_UKB_20211120 ieu-a-1095 Age_at_menarche Quantitative UKB UK Biobank C+T (GT) Large GWAS 25231870 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1095/ieu-a-1095.vcf.gz 13852 4.2e-285 0.0113875144317581 Beta 0.0718 -0.012872-0.156472 0.0718 -0.012872-0.156472 0.0584 -0.001772-0.118572 0.0584 -0.001772-0.118572 0.0429 0.004092-0.081708 0.0429 0.004092-0.081708 0.0336 0.005376-0.061824 0.0336 0.005376-0.061824 0.0264 0.0068588-0.0459412 0.0264 0.0068588-0.0459412 0.01 -0.013912-0.033912 0.41 0.000558 -0.024726-0.025842 0.97 0.00397 -0.019942-0.027882 0.74 TRUE FALSE FALSE TRUE Both 110333 0 GRCh37/hg19 2.51e-02 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002817/ScoringFiles/ phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 7.61137221985377 normal_range years exprsweb-age-at-menarche-ieu-a-1095-dbslmm-ukb-20211120 exprsweb-age-at-menarche-ieu-a-1095-dbslmm-ukb-20211120 ExPRSweb_Age-at-menarche_ieu-a-1095_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Age-at-menarche_ieu-a-1095_DBSLMM_UKB_20211120 ieu-a-1095 Age_at_menarche Quantitative UKB UK Biobank DBSLMM Large GWAS 25231870 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1095/ieu-a-1095.vcf.gz 991712 1.5e-80 0.00299115561675022 Beta 0.00794 -0.077124-0.093004 0.00794 -0.077124-0.093004 0.0111 -0.049268-0.071468 0.0111 -0.049268-0.071468 0.0125 -0.026308-0.051308 0.0125 -0.026308-0.051308 0.0139 -0.014324-0.042124 0.0139 -0.014324-0.042124 0.0126 -0.0069412-0.0321412 0.0126 -0.0069412-0.0321412 -0.000409 -0.025105-0.024287 0.97 0.000582 -0.023918-0.025082 0.96 0.0182 -0.005712-0.042112 0.14 TRUE FALSE FALSE TRUE Both 110333 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002818/ScoringFiles/ phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 7.67605790722247 normal_range years exprsweb-age-at-menarche-ieu-a-1095-prscs-ukb-20211120 exprsweb-age-at-menarche-ieu-a-1095-prscs-ukb-20211120 ExPRSweb_Age-at-menarche_ieu-a-1095_PRSCS_UKB_20211120 PRSCS ExPRSweb_Age-at-menarche_ieu-a-1095_PRSCS_UKB_20211120 ieu-a-1095 Age_at_menarche Quantitative UKB UK Biobank PRS-CS Large GWAS 25231870 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1095/ieu-a-1095.vcf.gz 895562 7.8e-281 0.0106931053219235 Beta 0.0501 -0.034768-0.134968 0.0501 -0.034768-0.134968 0.0452 -0.015168-0.105568 0.0452 -0.015168-0.105568 0.0404 0.001592-0.079208 0.0404 0.001592-0.079208 0.0363 0.008076-0.064524 0.0363 0.008076-0.064524 0.0223 0.0027588-0.0418412 0.0223 0.0027588-0.0418412 0.00191 -0.021806-0.025626 0.87 0.0179 -0.006012-0.041812 0.14 0.00446 -0.019844-0.028764 0.72 TRUE FALSE FALSE TRUE Both 110333 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002819/ScoringFiles/ phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 7.61271245265951 normal_range years exprsweb-age-at-menarche-ieu-a-1095-lassosum-ukb-20211120 exprsweb-age-at-menarche-ieu-a-1095-lassosum-ukb-20211120 ExPRSweb_Age-at-menarche_ieu-a-1095_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Age-at-menarche_ieu-a-1095_LASSOSUM_UKB_20211120 ieu-a-1095 Age_at_menarche Quantitative UKB UK Biobank lassosum Large GWAS 25231870 wget https://gwas.mrcieu.ac.uk/files/ieu-a-1095/ieu-a-1095.vcf.gz 137734 1.3e-223 0.00801488068408102 Beta 0.0655 -0.019172-0.150172 0.0655 -0.019172-0.150172 0.0494 -0.010772-0.109572 0.0494 -0.010772-0.109572 0.0383 -0.000508-0.077108 0.0383 -0.000508-0.077108 0.0302 0.001976-0.058424 0.0302 0.001976-0.058424 0.0229 0.0033588-0.0424412 0.0229 0.0033588-0.0424412 0.00015 -0.02435-0.02465 0.99 0.0127 -0.011212-0.036612 0.3 0.00287 -0.02163-0.02737 0.82 TRUE FALSE FALSE TRUE Both 110333 0 GRCh37/hg19 s=0.9;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002815/ScoringFiles/ phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Age-at-menarche_ieu-a-1095_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 7.6307156014805 normal_range years exprsweb-height-ieu-a-89-pt-mgi-freeze3-20211120 exprsweb-height-ieu-a-89-pt-mgi-freeze3-20211120 ExPRSweb_Height_ieu-a-89_PT_MGI-Freeze3_20211120 PT ExPRSweb_Height_ieu-a-89_PT_MGI-Freeze3_20211120 ieu-a-89 Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 2469 2.2e-1081 0.0778474138093904 Beta 0.761 0.700044-0.821956 0.761 0.700044-0.821956 0.69 0.646684-0.733316 0.69 0.646684-0.733316 0.617 0.589364-0.644636 0.617 0.589364-0.644636 0.561 0.541204-0.580796 0.561 0.541204-0.580796 0.491 0.4773192-0.5046808 0.491 0.4773192-0.5046808 0.266 0.249536-0.282464 6.36e-221 0.447 0.4300656-0.4639344 1e-584 0.746 0.7283796-0.7636204 1e-1500 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 2.00e-05 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002980/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 38.1949740512677 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-plink-mgi-freeze3-20211120 exprsweb-height-ieu-a-89-plink-mgi-freeze3-20211120 ExPRSweb_Height_ieu-a-89_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_Height_ieu-a-89_PLINK_MGI-Freeze3_20211120 ieu-a-89 Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 2500 2.9e-1049 0.0771445149985665 Beta 0.768 0.707044-0.828956 0.768 0.707044-0.828956 0.695 0.651684-0.738316 0.695 0.651684-0.738316 0.615 0.587364-0.642636 0.615 0.587364-0.642636 0.552 0.532008-0.571992 0.552 0.532008-0.571992 0.484 0.4703192-0.4976808 0.484 0.4703192-0.4976808 0.259 0.2426144-0.2753856 1.78e-211 0.443 0.4261048-0.4598952 1e-576 0.732 0.714458-0.749542 1e-1450 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 6.31e-06 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002981/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 38.3955780874743 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-dbslmm-mgi-freeze3-20211120 exprsweb-height-ieu-a-89-dbslmm-mgi-freeze3-20211120 ExPRSweb_Height_ieu-a-89_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_Height_ieu-a-89_DBSLMM_MGI-Freeze3_20211120 ieu-a-89 Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 912901 5.6e-90 0.0111050359154564 Beta 0.282 0.220652-0.343348 0.282 0.220652-0.343348 0.251 0.207292-0.294708 0.251 0.207292-0.294708 0.223 0.194972-0.251028 0.223 0.194972-0.251028 0.19 0.169616-0.210384 0.19 0.169616-0.210384 0.149 0.1347312-0.1632688 0.149 0.1347312-0.1632688 0.0787 0.0608836-0.0965164 4.86e-18 0.155 0.1368504-0.1731496 2.86e-63 0.235 0.2164192-0.2535808 4.57e-135 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002982/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 45.5359530953961 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-prscs-mgi-freeze3-20211120 exprsweb-height-ieu-a-89-prscs-mgi-freeze3-20211120 ExPRSweb_Height_ieu-a-89_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_Height_ieu-a-89_PRSCS_MGI-Freeze3_20211120 ieu-a-89 Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 915020 1.7e-884 0.0567259806125972 Beta 0.691 0.629848-0.752152 0.691 0.629848-0.752152 0.655 0.611684-0.698316 0.655 0.611684-0.698316 0.584 0.556364-0.611636 0.584 0.556364-0.611636 0.512 0.492008-0.531992 0.512 0.492008-0.531992 0.447 0.4331428-0.4608572 0.447 0.4331428-0.4608572 0.235 0.2176932-0.2523068 5.17e-156 0.416 0.39836-0.43364 1e-466 0.684 0.665576-0.702424 1e-1150 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002983/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 39.4586475361433 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-lassosum-mgi-freeze3-20211120 exprsweb-height-ieu-a-89-lassosum-mgi-freeze3-20211120 ExPRSweb_Height_ieu-a-89_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_Height_ieu-a-89_LASSOSUM_MGI-Freeze3_20211120 ieu-a-89 Height Quantitative stratify by Sex MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 280347 1e-712 0.0527879328722855 Beta 0.632 0.570848-0.693152 0.632 0.570848-0.693152 0.578 0.534684-0.621316 0.578 0.534684-0.621316 0.529 0.501168-0.556832 0.529 0.501168-0.556832 0.474 0.454008-0.493992 0.474 0.454008-0.493992 0.403 0.3890644-0.4169356 0.403 0.3890644-0.4169356 0.223 0.205752-0.240248 1.23e-141 0.374 0.3564972-0.3915028 1e-382 0.618 0.5997524-0.6362476 1e-959 TRUE FALSE FALSE TRUE Both 23349 0 GRCh37/hg19 s=0.5;Lambda=0.00428 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002979/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 40.6315530747176 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-pt-ukb-20211120 exprsweb-height-ieu-a-89-pt-ukb-20211120 ExPRSweb_Height_ieu-a-89_PT_UKB_20211120 PT ExPRSweb_Height_ieu-a-89_PT_UKB_20211120 ieu-a-89 Height Quantitative stratify by Sex UKB UK Biobank C+T (DS) Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 6903 1.2e-11925 0.0978382283804303 Beta 0.862 0.841028-0.882972 0.862 0.841028-0.882972 0.792 0.7771824-0.8068176 0.792 0.7771824-0.8068176 0.7 0.690592-0.709408 0.7 0.690592-0.709408 0.626 0.6192576-0.6327424 0.626 0.6192576-0.6327424 0.539 0.5344332-0.5435668 0.539 0.5344332-0.5435668 0.289 0.283708-0.294292 1e-2500 0.494 0.4886884-0.4993116 1e-7200 0.8 0.7945316-0.8054684 1e-17900 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 1.00e-03 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002990/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_PT_UKB_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_PT_UKB_20211120/exclusion.tsv 2021-01-10 31.4076833467237 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-plink-ukb-20211120 exprsweb-height-ieu-a-89-plink-ukb-20211120 ExPRSweb_Height_ieu-a-89_PLINK_UKB_20211120 PLINK ExPRSweb_Height_ieu-a-89_PLINK_UKB_20211120 ieu-a-89 Height Quantitative stratify by Sex UKB UK Biobank C+T (GT) Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 7080 4.3e-11878 0.0967174670634027 Beta 0.867 0.846028-0.887972 0.867 0.846028-0.887972 0.797 0.782202-0.811798 0.797 0.782202-0.811798 0.699 0.6896116-0.7083884 0.699 0.6896116-0.7083884 0.624 0.6172576-0.6307424 0.624 0.6172576-0.6307424 0.537 0.5324332-0.5415668 0.537 0.5324332-0.5415668 0.289 0.283708-0.294292 1e-2490 0.493 0.4876884-0.4983116 1e-7180 0.798 0.7925316-0.8034684 1e-17800 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 2.51e-04 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002991/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 31.4342971277496 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-dbslmm-ukb-20211120 exprsweb-height-ieu-a-89-dbslmm-ukb-20211120 ExPRSweb_Height_ieu-a-89_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_Height_ieu-a-89_DBSLMM_UKB_20211120 ieu-a-89 Height Quantitative stratify by Sex UKB UK Biobank DBSLMM Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 464103 2.21026859398762e-308 0.00277862177261649 Beta 0.142 0.120832-0.163168 0.142 0.120832-0.163168 0.145 0.130006-0.159994 0.145 0.130006-0.159994 0.124 0.1143764-0.1336236 0.124 0.1143764-0.1336236 0.107 0.1000028-0.1139972 0.107 0.1000028-0.1139972 0.0935 0.0886588-0.0983412 0.0935 0.0886588-0.0983412 0.0496 0.0437004-0.0554996 8.38e-61 0.086 0.0800808-0.0919192 2.64e-178 0.139 0.1330808-0.1449192 1e-459 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002992/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 39.5996936647916 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-prscs-ukb-20211120 exprsweb-height-ieu-a-89-prscs-ukb-20211120 ExPRSweb_Height_ieu-a-89_PRSCS_UKB_20211120 PRSCS ExPRSweb_Height_ieu-a-89_PRSCS_UKB_20211120 ieu-a-89 Height Quantitative stratify by Sex UKB UK Biobank PRS-CS Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 915553 4.9e-13188 0.10560694207736 Beta 0.892 0.871028-0.912972 0.892 0.871028-0.912972 0.826 0.811202-0.840798 0.826 0.811202-0.840798 0.72 0.7106116-0.7293884 0.72 0.7106116-0.7293884 0.647 0.6402772-0.6537228 0.647 0.6402772-0.6537228 0.559 0.5544528-0.5635472 0.559 0.5544528-0.5635472 0.303 0.2977668-0.3082332 1e-2800 0.516 0.5107276-0.5212724 1e-7990 0.833 0.8275708-0.8384292 1e-19600 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002993/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 30.7170801895016 normal_range cm stratify by Sex exprsweb-height-ieu-a-89-lassosum-ukb-20211120 exprsweb-height-ieu-a-89-lassosum-ukb-20211120 ExPRSweb_Height_ieu-a-89_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_Height_ieu-a-89_LASSOSUM_UKB_20211120 ieu-a-89 Height Quantitative stratify by Sex UKB UK Biobank lassosum Large GWAS 25282103 wget https://gwas.mrcieu.ac.uk/files/ieu-a-89/ieu-a-89.vcf.gz 282132 4.2e-10589 0.0905228443124492 Beta 0.823 0.802028-0.843972 0.823 0.802028-0.843972 0.756 0.7411628-0.7708372 0.756 0.7411628-0.7708372 0.662 0.6525724-0.6714276 0.662 0.6525724-0.6714276 0.591 0.584238-0.597762 0.591 0.584238-0.597762 0.51 0.505394-0.514606 0.51 0.505394-0.514606 0.279 0.2736492-0.2843508 1e-2280 0.475 0.46961-0.48039 1e-6500 0.762 0.7564728-0.7675272 1e-15900 TRUE FALSE FALSE TRUE Both 203681 0 GRCh37/hg19 s=0.5;Lambda=0.00336 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002989/ScoringFiles/ phewas/ExPRSweb_Height_ieu-a-89_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_Height_ieu-a-89_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 32.17349768374 normal_range cm stratify by Sex exprsweb-c-reactive-protein-prot-a-670-pt-mgi-freeze3-20211120 exprsweb-c-reactive-protein-prot-a-670-pt-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_prot-a-670_PT_MGI-Freeze3_20211120 PT ExPRSweb_C-reactive-protein_prot-a-670_PT_MGI-Freeze3_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (DS) Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 5 1.1e-06 0.0066708210941153 Beta 0.288 0.094156-0.481844 0.288 0.094156-0.481844 0.272 0.134212-0.409788 0.272 0.134212-0.409788 0.163 0.086168-0.239832 0.163 0.086168-0.239832 0.15 0.085712-0.214288 0.15 0.085712-0.214288 0.143 0.0989-0.1871 0.143 0.0989-0.1871 0.0786 0.02568-0.13152 0.00359 0.109 0.056668-0.161332 4.83e-05 0.203 0.14812-0.25788 4.21e-13 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 1.58e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002875/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_PT_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_PT_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.595069445373306 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-plink-mgi-freeze3-20211120 exprsweb-c-reactive-protein-prot-a-670-plink-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_prot-a-670_PLINK_MGI-Freeze3_20211120 PLINK ExPRSweb_C-reactive-protein_prot-a-670_PLINK_MGI-Freeze3_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 C+T (GT) Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 5 1.1e-06 0.0066708210941153 Beta 0.288 0.094156-0.481844 0.288 0.094156-0.481844 0.272 0.134212-0.409788 0.272 0.134212-0.409788 0.163 0.086168-0.239832 0.163 0.086168-0.239832 0.15 0.085712-0.214288 0.15 0.085712-0.214288 0.143 0.0989-0.1871 0.143 0.0989-0.1871 0.0786 0.02568-0.13152 0.00359 0.109 0.056668-0.161332 4.83e-05 0.203 0.14812-0.25788 4.21e-13 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 1.58e-08 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002876/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_PLINK_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_PLINK_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.595069445373306 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-dbslmm-mgi-freeze3-20211120 exprsweb-c-reactive-protein-prot-a-670-dbslmm-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_MGI-Freeze3_20211120 DBSLMM ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_MGI-Freeze3_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 DBSLMM Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 1662602 0.11 0.000524848698040974 Beta 0.0726 -0.121048-0.266248 0.0726 -0.121048-0.266248 0.0173 -0.120292-0.154892 0.0173 -0.120292-0.154892 -0.0347 -0.123096-0.053696 -0.0347 -0.123096-0.053696 -0.0317 -0.095988-0.032588 -0.0317 -0.095988-0.032588 0.00463 -0.039862-0.049122 0.00463 -0.039862-0.049122 0.0147 -0.04018-0.06958 0.599 0.0285 -0.026772-0.083772 0.312 0.0205 -0.034184-0.075184 0.462 FALSE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002877/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.597540071578967 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-prscs-mgi-freeze3-20211120 exprsweb-c-reactive-protein-prot-a-670-prscs-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_MGI-Freeze3_20211120 PRSCS ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_MGI-Freeze3_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 PRS-CS Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 1113794 0.45 0.000719546688283056 Beta -0.0434 -0.237048-0.150248 -0.0434 -0.237048-0.150248 0.169 0.031408-0.306592 0.169 0.031408-0.306592 0.148 0.059604-0.236396 0.148 0.059604-0.236396 0.0665 0.002212-0.130788 0.0665 0.002212-0.130788 0.0296 -0.015088-0.074288 0.0296 -0.015088-0.074288 0.000202 -0.055266-0.05567 0.994 0.0291 -0.025584-0.083784 0.297 0.0395 -0.015576-0.094576 0.159 FALSE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 PRS_auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002878/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.597764662807225 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-lassosum-mgi-freeze3-20211120 exprsweb-c-reactive-protein-prot-a-670-lassosum-mgi-freeze3-20211120 ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_MGI-Freeze3_20211120 LASSOSUM ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_MGI-Freeze3_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl MGI Michigan Genomics Initiative Freeze 3 lassosum Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 316203 6.8e-06 0.00674728977342506 Beta 0.21 0.016352-0.403648 0.21 0.016352-0.403648 0.0768 -0.060792-0.214392 0.0768 -0.060792-0.214392 0.196 0.107604-0.284396 0.196 0.107604-0.284396 0.162 0.097908-0.226092 0.162 0.097908-0.226092 0.0991 0.054608-0.143592 0.0991 0.054608-0.143592 0.0748 0.022076-0.127524 0.00543 0.134 0.079904-0.188096 1.25e-06 0.168 0.114296-0.221704 8.49e-10 TRUE FALSE FALSE TRUE Both 5147 0 GRCh37/hg19 s=0.5;Lambda=0.06158 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002874/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_MGI-Freeze3_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_MGI-Freeze3_20211120/exclusion.tsv 2021-01-10 0.595481835562242 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-pt-ukb-20211120 exprsweb-c-reactive-protein-prot-a-670-pt-ukb-20211120 ExPRSweb_C-reactive-protein_prot-a-670_PT_UKB_20211120 PT ExPRSweb_C-reactive-protein_prot-a-670_PT_UKB_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank C+T (DS) Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 5 1.1e-475 0.0114969578407842 Beta 0.308 0.27664-0.33936 0.308 0.27664-0.33936 0.267 0.244656-0.289344 0.267 0.244656-0.289344 0.227 0.2126724-0.2413276 0.227 0.2126724-0.2413276 0.212 0.2015924-0.2224076 0.212 0.2015924-0.2224076 0.188 0.1807872-0.1952128 0.188 0.1807872-0.1952128 0.0933 0.0852836-0.1013164 3.74e-115 0.167 0.1586896-0.1753104 1e-338 0.274 0.2651996-0.2828004 1e-810 TRUE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 3.16e-09 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002885/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_PT_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_PT_UKB_20211120/exclusion.tsv 2021-01-10 18.7187410823232 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-plink-ukb-20211120 exprsweb-c-reactive-protein-prot-a-670-plink-ukb-20211120 ExPRSweb_C-reactive-protein_prot-a-670_PLINK_UKB_20211120 PLINK ExPRSweb_C-reactive-protein_prot-a-670_PLINK_UKB_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank C+T (GT) Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 5 1.1e-475 0.0114969578407842 Beta 0.308 0.27664-0.33936 0.308 0.27664-0.33936 0.267 0.244656-0.289344 0.267 0.244656-0.289344 0.227 0.2126724-0.2413276 0.227 0.2126724-0.2413276 0.212 0.2015924-0.2224076 0.212 0.2015924-0.2224076 0.188 0.1807872-0.1952128 0.188 0.1807872-0.1952128 0.0933 0.0852836-0.1013164 3.74e-115 0.167 0.1586896-0.1753104 1e-338 0.274 0.2651996-0.2828004 1e-810 TRUE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 3.16e-09 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002886/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_PLINK_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_PLINK_UKB_20211120/exclusion.tsv 2021-01-10 18.7187410823232 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-dbslmm-ukb-20211120 exprsweb-c-reactive-protein-prot-a-670-dbslmm-ukb-20211120 ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_UKB_20211120 DBSLMM ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_UKB_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank DBSLMM Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 444899 0.51 4.91833683443617e-05 Beta 0.0288 -0.002756-0.060356 0.0288 -0.002756-0.060356 0.0171 -0.005244-0.039444 0.0171 -0.005244-0.039444 0.00912 -0.0052468-0.0234868 0.00912 -0.0052468-0.0234868 0.0124 0.0019532-0.0228468 0.0124 0.0019532-0.0228468 0.00997 0.0027376-0.0172024 0.00997 0.0027376-0.0172024 -0.00148 -0.0103-0.00734 0.743 0.00339 -0.0053908-0.0121708 0.449 0.0106 0.0017212-0.0194788 0.0194 FALSE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 default https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002887/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_DBSLMM_UKB_20211120/exclusion.tsv 2021-01-10 18.9282006334359 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-prscs-ukb-20211120 exprsweb-c-reactive-protein-prot-a-670-prscs-ukb-20211120 ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_UKB_20211120 PRSCS ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_UKB_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank PRS-CS Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 1114754 6.2e-24 0.000472184694431965 Beta 0.0663 0.034744-0.097856 0.0663 0.034744-0.097856 0.0504 0.028056-0.072744 0.0504 0.028056-0.072744 0.0478 0.0334332-0.0621668 0.0478 0.0334332-0.0621668 0.0402 0.0297532-0.0506468 0.0402 0.0297532-0.0506468 0.0388 0.0315676-0.0460324 0.0388 0.0315676-0.0460324 0.0227 0.01388-0.03152 4.67e-07 0.0325 0.023778-0.041222 2.54e-13 0.0572 0.0483408-0.0660592 1.27e-36 TRUE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 auto https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002888/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_PRSCS_UKB_20211120/exclusion.tsv 2021-01-10 18.9183539245394 normal_range 0.01 0.3 mg/dl exprsweb-c-reactive-protein-prot-a-670-lassosum-ukb-20211120 exprsweb-c-reactive-protein-prot-a-670-lassosum-ukb-20211120 ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_UKB_20211120 LASSOSUM ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_UKB_20211120 prot-a-670 C_reactive_protein Quantitative Range unit: mg/dl UKB UK Biobank lassosum Large GWAS 29875488 wget https://gwas.mrcieu.ac.uk/files/prot-a-670/prot-a-670.vcf.gz 370520 1.5e-472 0.0115225698804801 Beta 0.31 0.27864-0.34136 0.31 0.27864-0.34136 0.276 0.253656-0.298344 0.276 0.253656-0.298344 0.228 0.2136528-0.2423472 0.228 0.2136528-0.2423472 0.207 0.1965728-0.2174272 0.207 0.1965728-0.2174272 0.185 0.1777872-0.1922128 0.185 0.1777872-0.1922128 0.0911 0.0831228-0.0990772 6.54e-111 0.168 0.1595916-0.1764084 1e-336 0.271 0.2621408-0.2798592 1e-782 TRUE FALSE FALSE TRUE Both 194718 0 GRCh37/hg19 s=0.2;Lambda=0.07848 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS002884/ScoringFiles/ phewas/ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_UKB_20211120/all.tsv phewas/ExPRSweb_C-reactive-protein_prot-a-670_LASSOSUM_UKB_20211120/exclusion.tsv 2021-01-10 18.7201184738435 normal_range 0.01 0.3 mg/dl