University of Michigan Center for Statistical 
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Recently Developed Software

polymutt

Polymorphism calling and de novo mutation detection in families for next-gen sequencing data

glfSim

A simulator to simulation Genotype Likelihood Format files for next-gen sequencing

qplot

A quality assessment and diagnosis tool for next-gen sequencing

bam2ReadCount

A tool to obtain read counts (e.g. gene/exon expression) from BAM files for each exon and gene for RNAseq

 
 

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