addEntry(SamRecord &record) (defined in PileupElement) | PileupElement | [virtual] |
analyze() (defined in PileupElement) | PileupElement | [virtual] |
getChromosome() const (defined in PileupElement) | PileupElement | [inline] |
getReference() (defined in PileupElement) | PileupElement | [inline, protected, static] |
getRefPosition() const (defined in PileupElement) | PileupElement | [inline] |
PileupElement() (defined in PileupElement) | PileupElement | |
PileupElement(const PileupElement &q) (defined in PileupElement) | PileupElement | |
reset(int32_t refPosition) (defined in PileupElement) | PileupElement | [virtual] |
setReference(GenomeSequence *reference) (defined in PileupElement) | PileupElement | [static] |
UNSET_POSITION (defined in PileupElement) | PileupElement | [static] |
~PileupElement() (defined in PileupElement) | PileupElement | [virtual] |