This is a base class pileup component, representing the information for one reference position. More...
#include <PileupElement.h>
Public Member Functions | |
PileupElement (const PileupElement &q) | |
virtual void | addEntry (SamRecord &record) |
virtual void | analyze () |
virtual void | reset (int32_t refPosition) |
const char * | getChromosome () const |
int32_t | getRefPosition () const |
Static Protected Attributes | |
static const int32_t | UNSET_POSITION = -1 |
This is a base class pileup component, representing the information for one reference position.
Child classes will be defined to detail more information that needs to be saved and how it should be analyzed.
Definition at line 26 of file PileupElement.h.