libStatGen Software  1
FileType.cpp
00001 /*
00002  *  Copyright (C) 2010  Regents of the University of Michigan
00003  *
00004  *   This program is free software: you can redistribute it and/or modify
00005  *   it under the terms of the GNU General Public License as published by
00006  *   the Free Software Foundation, either version 3 of the License, or
00007  *   (at your option) any later version.
00008  *
00009  *   This program is distributed in the hope that it will be useful,
00010  *   but WITHOUT ANY WARRANTY; without even the implied warranty of
00011  *   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
00012  *   GNU General Public License for more details.
00013  *
00014  *   You should have received a copy of the GNU General Public License
00015  *   along with this program.  If not, see <http://www.gnu.org/licenses/>.
00016  */
00017 
00018 #include "FileType.h"
00019 
00020 FileType::FileType()
00021 {
00022 };
00023 
00024 
00025 FileType::~FileType()
00026 {
00027 };
00028 
00029 
00030 // Set by the InputFile to inform this class if buffering
00031 // is used.  Maybe used by child clases (bgzf) to disable 
00032 // tell.  NOTE: this class does no buffering, the
00033 // buffering is handled by the calling class.
00034 void FileType::setBuffered(bool buffered)
00035 {
00036     myUsingBuffer = buffered;
00037 }
00038 
00039 //
00040 // one class, BgzfFileTypeRecovery overloads this method because
00041 // it is able to sync on a new record using the checkSignature
00042 // callback function.
00043 //
00044 // For all other classes, this is a NOP (sync fails).
00045 //
00046 bool FileType::attemptRecoverySync(bool (*checkSignature)(void *data) , int length)
00047 {
00048     return false;
00049 }
00050 
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