Directories

This directory hierarchy is sorted roughly, but not completely, alphabetically:

bam

examples

pileup

printRefPositions

test

fastq

test

general

test

baseUtilitiesTest

cigar

dbsnp

inputFileTest

memoryMapArrayTest

nonOverlapRegions

packedVectorTest

referenceSequenceTest

reusableVector

string

trimSequence

glf

test

samtools