libStatGen Software  1
PedigreeGlobals Member List
This is the complete list of members for PedigreeGlobals, including all inherited members.
affectionCount (defined in PedigreeGlobals)PedigreeGlobals [static]
affectionLookup (defined in PedigreeGlobals)PedigreeGlobals [static]
affectionNames (defined in PedigreeGlobals)PedigreeGlobals [static]
AlleleFrequenciesAvailable() (defined in PedigreeGlobals)PedigreeGlobals [static]
chromosomeX (defined in PedigreeGlobals)PedigreeGlobals [static]
covariateCount (defined in PedigreeGlobals)PedigreeGlobals [static]
covariateLookup (defined in PedigreeGlobals)PedigreeGlobals [static]
covariateNames (defined in PedigreeGlobals)PedigreeGlobals [static]
FlagMissingMarkers(IntArray &missingMarkers) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetAffectionID(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetCovariateID(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetMarkerID(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetMarkerInfo(String &name) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetMarkerInfo(int marker) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetOrderedMarkers(IntArray &markers) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetStringID(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [static]
GetTraitID(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [static]
GrowMarkerInfo() (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadAllele(int marker, String &label) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadAllele(MarkerInfo *info, String &label) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadAlleleFrequencies(const char *filename, bool required=false) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadAlleleFrequencies(IFILE &file) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadBasepairMap(const char *filename) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadBasepairMap(IFILE &file) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadMarkerMap(const char *filename, bool filter=false) (defined in PedigreeGlobals)PedigreeGlobals [static]
LoadMarkerMap(IFILE &file, bool filter=false) (defined in PedigreeGlobals)PedigreeGlobals [static]
LookupAffection(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [inline, static]
LookupCovariate(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [inline, static]
LookupMarker(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [inline, static]
LookupString(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [inline, static]
LookupTrait(const char *name) (defined in PedigreeGlobals)PedigreeGlobals [inline, static]
markerCount (defined in PedigreeGlobals)PedigreeGlobals [static]
markerInfo (defined in PedigreeGlobals)PedigreeGlobals [static]
markerInfoByInteger (defined in PedigreeGlobals)PedigreeGlobals [static]
markerInfoByName (defined in PedigreeGlobals)PedigreeGlobals [static]
markerInfoCount (defined in PedigreeGlobals)PedigreeGlobals [static]
markerInfoSize (defined in PedigreeGlobals)PedigreeGlobals [static]
markerLookup (defined in PedigreeGlobals)PedigreeGlobals [static]
markerNames (defined in PedigreeGlobals)PedigreeGlobals [static]
MarkerPositionsAvailable() (defined in PedigreeGlobals)PedigreeGlobals [static]
PedigreeGlobals() (defined in PedigreeGlobals)PedigreeGlobals [inline]
sexSpecificMap (defined in PedigreeGlobals)PedigreeGlobals [static]
SortMarkersInMapOrder(IntArray &markers, int chromosome=-1) (defined in PedigreeGlobals)PedigreeGlobals [static]
stringCount (defined in PedigreeGlobals)PedigreeGlobals [static]
stringLookup (defined in PedigreeGlobals)PedigreeGlobals [static]
stringNames (defined in PedigreeGlobals)PedigreeGlobals [static]
traitCount (defined in PedigreeGlobals)PedigreeGlobals [static]
traitLookup (defined in PedigreeGlobals)PedigreeGlobals [static]
traitNames (defined in PedigreeGlobals)PedigreeGlobals [static]
VerifySexSpecificOrder() (defined in PedigreeGlobals)PedigreeGlobals [static]
WriteFreqFile(const char *filename, bool old_format=false) (defined in PedigreeGlobals)PedigreeGlobals [static]
WriteFreqFile(FILE *file, bool old_format=false) (defined in PedigreeGlobals)PedigreeGlobals [static]
WriteMapFile(const char *filename) (defined in PedigreeGlobals)PedigreeGlobals [static]
WriteMapFile(FILE *file) (defined in PedigreeGlobals)PedigreeGlobals [static]
~PedigreeGlobals() (defined in PedigreeGlobals)PedigreeGlobals
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